TomoSeq data search

Data search

Results for MligTC455_30099

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_30099

1989

41.44

Mlig455_013060

Neo: -

Age: -

Mlig455_013060 {REF} {Length: 4580} {Pfam: IQ calmodulin-binding motif [PF00612.29, score=40.2]} {Dmel: FBgn0030541, CG11584, [Score=57.4, Expect=6e-08]} {RNA1509_37972} {RNA1310_27776.1} {RNA815_13510}

Cumulative graph for MligTC455_30099

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.403	5.514	0.12083	0.71438
RegionR2	0.156	5.514	0.69300	1.00000
RegionR3	0.648	5.514	0.03046	0.30052
RegionR4	0.227	5.514	0.53349	0.85683
RegionR5	0.285	5.514	0.31662	0.65700
RegionR6	0.455	5.514	0.14242	0.67635
RegionR7	-0.272	5.514	0.49437	1.00000
RegionR8	-0.095	5.514	0.83650	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	2.151	5.514	0.05072	0.69902
RegenerationR2	0.733	5.514	0.02944	0.28209
RegenerationR3	0.812	5.514	0.02490	0.28366
RegenerationR4	0.928	5.514	0.01280	0.17451
RegenerationR5	0.965	5.514	0.00495	0.12769
RegenerationR6	1.215	5.514	0.00053	0.02414
RegenerationBL	0.764	5.514	0.04408	0.24006
RegenerationTP	0.054	5.514	0.90690	1.00000

Genes with expression patterns similar to MligTC455_30099

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_30099	1989	41.44	Mlig455_013060	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_013060 {REF} {Length: 4580} {Pfam: IQ calmodulin-binding motif [PF00612.29, score=40.2]} {Dmel: FBgn0030541, CG11584, [Score=57.4, Expect=6e-08]} {RNA1509_37972} {RNA1310_27776.1} {RNA815_13510}
2.	MligTC455_48035	2027	42.24	Mlig455_023759	Neo: - Age: -		1.672	-	0.722	-	0.950	-	-	Mlig455_023759 {REF} {Length: 770} {NoTransDecoderORF} {RNA1509_40830} {RNA1310_16528.1, RNA1509_40830} {RNA1509_40830, RNA815_31871}
3.	MligTC455_50793	1150	23.96	Mlig455_050628	Neo: - Age: -		0.978	-	-	-	-	-	0.978	Mlig455_050628 {REF} {Length: 1302} {TRANSSPLICED} {RNA1509_14468, RNA1509_9990} {RNA1310_27653, RNA1509_14468, RNA1509_9990} {RNA1509_14468, RNA1509_9990, RNA815_14056}
4.	MligTC455_32254	4780	99.59	Mlig455_063564	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.209 Region-enriched R4: 1.055/0.00127	VAMP1	0.976	-	-	-	0.976	-	-	Mlig455_063564 {REF} {Length: 1900} {TRANSSPLICED} {Pfam: Synaptobrevin [PF00957.23, score=96.7]; Rifin [PF02009.18, score=20.7]} {Human: ENSG00000139190, VAMP1, vesicle associated membrane protein 1, [Score=66.2, Expect=2e-14]; ENSG00000263620, AC129492.3, novel protein, [Score=65.9, Expect=2e-14]; ENSG00000220205, VAMP2, vesicle associated membrane protein 2, [Score=65.5, Expect=3e-14]; ENSG00000118640, VAMP8, vesicle associated membrane protein 8, [Score=63.9, Expect=8e-14]} {Mouse: ENSMUSG00000030337, Vamp1, vesicle-associated membrane protein 1, [Score=67.4, Expect=4e-15]; ENSMUSG00000020894, Vamp2, vesicle-associated membrane protein 2, [Score=67.0, Expect=1e-14]} {Dmel: FBgn0003660, Syb, Synaptobrevin, [Score=82.8, Expect=4e-21]} {Celegans: WBGene00004898, snb-2, SyNaptoBrevin related, [Score=75.1, Expect=2e-18]} {Smed: dd_Smed_v6_9710_0_1, dd_Smed_v6_9710_0_1, [Score=74.7, Expect=6e-18]} {RNA1509_1399, RNA1509_14159, RNA1509_14803, RNA1509_4160, RNA1509_4781} {RNA1310_6156.1, RNA1509_1399, RNA1509_14159, RNA1509_14803, RNA1509_4160, RNA1509_4781} {RNA1509_1399, RNA1509_14159, RNA1509_14803, RNA1509_4160, RNA1509_4781, RNA815_7965}
5.	MligTC455_32253	4695	97.82	Mlig455_028199	Neo: - Age: Down-Up-Down Region-enriched R4: 1.082/0.00093	VAMP1	0.975	-	-	-	0.975	-	-	Mlig455_028199 {REF} {Length: 1862} {TRANSSPLICED} {Pfam: Synaptobrevin [PF00957.23, score=96.7]; Rifin [PF02009.18, score=20.7]} {Human: ENSG00000139190, VAMP1, vesicle associated membrane protein 1, [Score=66.2, Expect=2e-14]; ENSG00000263620, AC129492.3, novel protein, [Score=65.9, Expect=2e-14]; ENSG00000220205, VAMP2, vesicle associated membrane protein 2, [Score=65.5, Expect=3e-14]; ENSG00000118640, VAMP8, vesicle associated membrane protein 8, [Score=63.9, Expect=8e-14]} {Mouse: ENSMUSG00000030337, Vamp1, vesicle-associated membrane protein 1, [Score=67.4, Expect=4e-15]; ENSMUSG00000020894, Vamp2, vesicle-associated membrane protein 2, [Score=67.0, Expect=1e-14]} {Dmel: FBgn0003660, Syb, Synaptobrevin, [Score=82.8, Expect=4e-21]} {Celegans: WBGene00004898, snb-2, SyNaptoBrevin related, [Score=75.1, Expect=2e-18]} {Smed: dd_Smed_v6_9710_0_1, dd_Smed_v6_9710_0_1, [Score=74.7, Expect=6e-18]} {RNA1509_4781} {RNA1310_6156.1} {RNA815_7965}
6.	MligTC455_36954	2263	47.15	Mlig455_041278	Neo: - Age: logFC(26M/2M)=-0.220 Region-enriched R3: 1.232/0.02876	MARC1	0.956	-	-	-	0.956	-	-	Mlig455_041278 {REF} {Length: 2109} {Pfam: MOSC N-terminal beta barrel domain [PF03476.18, score=77.0]; MOSC domain [PF03473.19, score=67.6]} {Human: ENSG00000186205, MARC1, mitochondrial amidoxime reducing component 1, [RH, Score=114, Expect=1e-28]} {Mouse: ENSMUSG00000026621, Marc1, mitochondrial amidoxime reducing component 1, [RH, Score=118, Expect=3e-30]; ENSMUSG00000073481, Marc2, mitochondrial amidoxime reducing component 2, [RH, Score=116, Expect=2e-29]} {Dmel: FBgn0033451, CG1665, [RH, Score=81.6, Expect=3e-17]} {Celegans: WBGene00018758, F53E10.1, [RH, Score=98.2, Expect=4e-23]} {Smed: dd_Smed_v6_7493_0_1, dd_Smed_v6_7493_0_1, [Score=63.2, Expect=3e-11]} {RNA1509_12139, RNA1509_16934, RNA1509_25829, RNA1509_27068, RNA1509_4542} {RNA1310_14706.1, RNA1509_12139, RNA1509_16934, RNA1509_25829, RNA1509_27068, RNA1509_4542} {RNA1509_12139, RNA1509_16934, RNA1509_25829, RNA1509_27068, RNA1509_4542, RNA815_10847}
7.	MligTC455_40265	979	20.39	Mlig455_034790, Mlig455_034802	Neo: - Age: Down-Up-Up Region-enriched R5: 1.052/0.02175	GGACT	0.956	-	-	-	0.956	-	-	Mlig455_034790 {REF} {Length: 1609} {TRANSSPLICED} {Pfam: Gamma-glutamyl cyclotransferase, AIG2-like [PF06094.14, score=60.6]} {Human: ENSG00000134864, GGACT, gamma-glutamylamine cyclotransferase, [Score=95.5, Expect=1e-24]} {Mouse: ENSMUSG00000041625, Ggact, gamma-glutamylamine cyclotransferase, [RH, Score=97.4, Expect=1e-25]} {Dmel: FBgn0035083, Tina-1, Troponin C-akin-1, [Score=80.5, Expect=5e-19]} {Celegans: WBGene00023489, F42A10.9, [Score=86.3, Expect=2e-21]} {Smed: dd_Smed_v6_9866_0_1, dd_Smed_v6_9866_0_1, [Score=85.5, Expect=3e-21]} {RNA1509_8317} {RNA1310_19342} {RNA815_8745} Mlig455_034802 {REF} {Length: 1780} {TRANSSPLICED} {Pfam: Gamma-glutamyl cyclotransferase, AIG2-like [PF06094.14, score=60.6]} {Human: ENSG00000134864, GGACT, gamma-glutamylamine cyclotransferase, [Score=95.5, Expect=1e-24]} {Mouse: ENSMUSG00000041625, Ggact, gamma-glutamylamine cyclotransferase, [RH, Score=97.4, Expect=1e-25]} {Dmel: FBgn0035083, Tina-1, Troponin C-akin-1, [Score=80.5, Expect=5e-19]} {Celegans: WBGene00023489, F42A10.9, [Score=86.3, Expect=2e-21]} {Smed: dd_Smed_v6_9866_0_1, dd_Smed_v6_9866_0_1, [Score=85.9, Expect=3e-21]} {RNA1509_8317} {RNA1310_19342, RNA1509_8317} {RNA1509_8317, RNA815_8745}
8.	MligTC455_22485	102	2.12	Mlig455_017492, Mlig455_027824, Mlig455_029167	Neo: - Age: - Region-enriched R2: 4.846/0.04988		0.951	-	-	-	-	-	0.951	Mlig455_017492 {REF} {Length: 319} {NoTransDecoderORF} {RNA1509_32404} {RNA1310_34178} {RNA815_36932.1} Mlig455_027824 {REF} {Length: 1406} {NoTransDecoderORF} {RNA1509_32404} {RNA1310_34178} {RNA815_36932.1} Mlig455_029167 {REF} {Length: 395} {NoTransDecoderORF} {RNA1509_32404} {RNA1310_34178} {RNA815_36932.1}
9.	MligTC455_14588	675	14.07	Mlig455_063648	Neo: Int S/G2/M Age: -	CSRP2	0.95	-	-	0.950	-	-	-	Mlig455_063648 {REF} {Length: 2954} {TRANSSPLICED} {Pfam: LIM domain [PF00412.24, score=93.5]; Zinc finger, C3HC4 type (RING finger) [PF17121.7, score=22.2]} {Human: ENSG00000175183, CSRP2, cysteine and glycine rich protein 2, [RH, Score=159, Expect=5e-49]} {Mouse: ENSMUSG00000020186, Csrp2, cysteine and glycine-rich protein 2, [RH, Score=159, Expect=2e-49]} {Dmel: FBgn0014863, Mlp84B, Muscle LIM protein at 84B, [Score=117, Expect=8e-31]} {Celegans: WBGene00003375, mlp-1, MLP/CRP family (Muscle LIM Protein/Cysteine-rich Protein), [Score=76.3, Expect=3e-18]} {Smed: dd_Smed_v6_373_0_1, dd_Smed_v6_373_0_1, [Score=98.2, Expect=1e-25]} {RNA1509_57252} {RNA1310_45023.1} {RNA815_22368}

Berezikov Lab - 2020-2021 © ERIBA