TomoSeq data search

Data search

Results for MligTC455_14656

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_14656

906

18.87

Mlig455_032710

Neo: -

Age: -

IKBKE

Mlig455_032710 {REF} {Length: 3079} {Pfam: Protein kinase domain [PF00069.27, score=132.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=73.7]; Fungal protein kinase [PF17667.3, score=26.0]} {Human: ENSG00000263528, IKBKE, inhibitor of nuclear factor kappa B kinase subunit epsilon, [RH, Score=223, Expect=1e-62]; ENSG00000183735, TBK1, TANK binding kinase 1, [RH, Score=221, Expect=3e-61]} {Mouse: ENSMUSG00000020115, Tbk1, TANK-binding kinase 1, [RH, Score=224, Expect=1e-62]; ENSMUSG00000042349, Ikbke, inhibitor of kappaB kinase epsilon, [RH, Score=223, Expect=2e-62]} {Dmel: FBgn0086657, IKKepsilon, I-kappaB kinase epsilon, [RH, Score=221, Expect=7e-62]} {Celegans: WBGene00012726, Y39G8B.5, [RH, Score=97.1, Expect=1e-20]} {Smed: dd_Smed_v6_1972_0_1, dd_Smed_v6_1972_0_1, [RH, Score=145, Expect=3e-36]} {RNA1509_10714, RNA1509_1184} {RNA1310_5031.1, RNA1509_10714, RNA1509_1184} {RNA1509_10714, RNA1509_1184, RNA815_1466.1}

Cumulative graph for MligTC455_14656

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.696	4.38	0.65721	1.00000
RegionR2	-1.418	4.38	0.14114	0.46752
RegionR3	-0.458	4.38	0.56855	1.00000
RegionR4	1.043	4.38	0.28030	0.58777
RegionR5	-0.158	4.38	0.84688	1.00000
RegionR6	0.609	4.38	0.42900	0.99327
RegionR7	0.234	4.38	0.78186	1.00000
RegionR8	0.843	4.38	0.36073	0.99514

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.073	4.38	0.97999	1.00000
RegenerationR2	0.419	4.38	0.65585	0.93888
RegenerationR3	-0.294	4.38	0.76519	0.96948
RegenerationR4	-0.487	4.38	0.62477	0.92200
RegenerationR5	0.132	4.38	0.88513	1.00000
RegenerationR6	-1.635	4.38	0.10553	0.40261
RegenerationBL	-0.612	4.38	0.51382	0.87712
RegenerationTP	-1.391	4.38	0.16918	0.60194

Genes with expression patterns similar to MligTC455_14656

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_14656	906	18.87	Mlig455_032710	Neo: - Age: -	IKBKE	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_032710 {REF} {Length: 3079} {Pfam: Protein kinase domain [PF00069.27, score=132.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=73.7]; Fungal protein kinase [PF17667.3, score=26.0]} {Human: ENSG00000263528, IKBKE, inhibitor of nuclear factor kappa B kinase subunit epsilon, [RH, Score=223, Expect=1e-62]; ENSG00000183735, TBK1, TANK binding kinase 1, [RH, Score=221, Expect=3e-61]} {Mouse: ENSMUSG00000020115, Tbk1, TANK-binding kinase 1, [RH, Score=224, Expect=1e-62]; ENSMUSG00000042349, Ikbke, inhibitor of kappaB kinase epsilon, [RH, Score=223, Expect=2e-62]} {Dmel: FBgn0086657, IKKepsilon, I-kappaB kinase epsilon, [RH, Score=221, Expect=7e-62]} {Celegans: WBGene00012726, Y39G8B.5, [RH, Score=97.1, Expect=1e-20]} {Smed: dd_Smed_v6_1972_0_1, dd_Smed_v6_1972_0_1, [RH, Score=145, Expect=3e-36]} {RNA1509_10714, RNA1509_1184} {RNA1310_5031.1, RNA1509_10714, RNA1509_1184} {RNA1509_10714, RNA1509_1184, RNA815_1466.1}
2.	MligTC455_35495	586	12.21	Mlig455_023069	Neo: - Age: -	PCF11	1.743	-	-	-	-	0.781	0.962	Mlig455_023069 {REF} {Length: 4117} {TRANSSPLICED} {Pfam: CID domain [PF04818.15, score=32.6]} {Human: ENSG00000165494, PCF11, PCF11, cleavage and polyadenylation factor subunit, [RH, Score=91.3, Expect=6e-18]} {Mouse: ENSMUSG00000041328, Pcf11, PCF11 cleavage and polyadenylation factor subunit, [RH, Score=92.4, Expect=2e-18]} {Dmel: FBgn0264962, Pcf11, Protein 1 of cleavage and polyadenylation factor 1, [Score=78.6, Expect=3e-14]} {Smed: dd_Smed_v6_3280_0_1, dd_Smed_v6_3280_0_1, [RH, Score=191, Expect=3e-50]} {RNA1509_13594} {RNA1310_1865.1} {RNA815_5333}
3.	MligTC455_44923	1476	30.74	Mlig455_042352, Mlig455_047121	Neo: - Age: Down-Up-Up	WDR34	1.71	-	-	-	0.757	-	0.953	Mlig455_042352 {REF} {Length: 2248} {TRANSSPLICED} {RNA1509_10795} {RNA1310_10379} {RNA815_12215.1} Mlig455_047121 {REF} {Length: 2263} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=25.1]} {Human: ENSG00000119333, WDR34, WD repeat domain 34, [Score=124, Expect=1e-29]} {Mouse: ENSMUSG00000039715, Wdr34, WD repeat domain 34, [Score=119, Expect=3e-28]} {Smed: dd_Smed_v6_14428_0_1, dd_Smed_v6_14428_0_1, [RH, Score=169, Expect=1e-45]} {RNA1509_10795} {RNA1310_10379, RNA1509_10795} {RNA1509_10795, RNA815_12215.1}
4.	MligTC455_47442	255	5.31	Mlig455_001051	Neo: - Age: -		1.703	-	-	-	-	0.730	0.973	Mlig455_001051 {REF} {Length: 342} {TRANSSPLICED} {RNA1509_13727} {RNA1310_23632} {RNA815_13707}
5.	MligTC455_40580	489	10.18	Mlig455_035816	Neo: - Age: Down-Up-Down		0.979	-	-	-	-	-	0.979	Mlig455_035816 {REF} {Length: 5011} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=26.3]} {Smed: dd_Smed_v6_3171_0_1, dd_Smed_v6_3171_0_1, [RH, Score=102, Expect=3e-24]} {RNA1509_14030, RNA1509_21360} {RNA1310_15645, RNA1509_14030, RNA1509_21360} {RNA1509_14030, RNA1509_21360, RNA815_4821.1}
6.	MligTC455_29281	1359	28.31	Mlig455_000186, Mlig455_067707	Neo: - Age: -	RPS20, SLMAP	0.976	-	-	-	-	-	0.976	Mlig455_000186 {REF} {Length: 4189} {Pfam: FHA domain [PF00498.28, score=65.5]; Fez1 [PF06818.17, score=20.8]; Inner membrane component of T3SS, cytoplasmic domain [PF16697.7, score=19.0]} {Human: ENSG00000163681, SLMAP, sarcolemma associated protein, [RH, Score=254, Expect=7e-74]} {Mouse: ENSMUSG00000021870, Slmap, sarcolemma associated protein, [RH, Score=252, Expect=2e-73]} {Dmel: FBgn0040011, Slmap, Sarcolemma associated protein, [Score=186, Expect=1e-49]} {Celegans: WBGene00019766, M4.1, [RH, Score=202, Expect=7e-57]} {Smed: dd_Smed_v6_3763_0_5, dd_Smed_v6_3763_0_5, [Score=247, Expect=3e-75]} {RNA1509_20169} {RNA1310_5284.1} {RNA815_8488} Mlig455_067707 {REF} {Length: 4007} {TRANSSPLICED} {Pfam: Ribosomal protein S10p/S20e [PF00338.24, score=51.0]} {Human: ENSG00000008988, RPS20, ribosomal protein S20, [Score=132, Expect=2e-36]} {Mouse: ENSMUSG00000028234, Rps20, ribosomal protein S20, [Score=132, Expect=2e-36]} {Dmel: FBgn0019936, RpS20, Ribosomal protein S20, [Score=128, Expect=6e-35]} {Celegans: WBGene00004489, rps-20, Ribosomal Protein, Small subunit, [Score=128, Expect=3e-35]} {Smed: dd_Smed_v6_123_0_2, dd_Smed_v6_123_0_2, [Score=107, Expect=1e-27]} {RNA1509_20169} {RNA1310_5284.1} {RNA815_8488}
7.	MligTC455_45449	816	16.99	Mlig455_019656, Mlig455_048058, Mlig455_048077	Neo: - Age: - Region-enriched R5: 1.162/0.00391		0.966	-	-	-	-	-	0.966	Mlig455_019656 {REF} {Length: 1031} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=21.4]} {Smed: dd_Smed_v6_9938_0_1, dd_Smed_v6_9938_0_1, [Score=42.7, Expect=3e-06]} {RNA1509_37985} {RNA1310_37034.1} {RNA815_18210} Mlig455_048058 {REF} {Length: 918} {TRANSSPLICED} {RNA1509_37985} {RNA1310_37034.1} {RNA815_18210} Mlig455_048077 {REF} {Length: 950} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=77.4]} {Smed: dd_Smed_v6_9938_0_1, dd_Smed_v6_9938_0_1, [Score=105, Expect=9e-29]} {RNA1509_37985} {RNA1310_37034.1} {RNA815_18210}
8.	MligTC455_09236	361	7.53	Mlig455_069872	Neo: - Age: -		0.965	-	-	-	-	-	0.965	Mlig455_069872 {REF} {Length: 971} {NoTransDecoderORF} {RNA1509_56890} {RNA1310_8409.1} {RNA815_29944}
9.	MligTC455_19918	1354	28.21	Mlig455_025037, Mlig455_065991	Neo: - Age: logFC(26M/2M)=-0.357	ODF3	0.965	-	-	-	-	0.965	-	Mlig455_025037 {REF} {Length: 1398} {TRANSSPLICED} {Pfam: Sperm-tail PG-rich repeat [PF07004.14, score=73.5]} {Human: ENSG00000177947, ODF3, outer dense fiber of sperm tails 3, [RH, Score=179, Expect=2e-55]} {Mouse: ENSMUSG00000025482, Odf3, outer dense fiber of sperm tails 3, [Score=175, Expect=8e-54]} {Dmel: FBgn0032010, CG8086, [RH, Score=117, Expect=4e-31]} {Smed: dd_Smed_v6_2658_0_1, dd_Smed_v6_2658_0_1, [Score=310, Expect=2e-107]} {RNA1509_2082, RNA1509_9762} {RNA1310_25121, RNA1509_2082, RNA1509_9762} {RNA1509_2082, RNA1509_9762, RNA815_11324} Mlig455_065991 {REF} {Length: 1403} {TRANSSPLICED} {Pfam: Sperm-tail PG-rich repeat [PF07004.14, score=70.6]} {Human: ENSG00000177947, ODF3, outer dense fiber of sperm tails 3, [RH, Score=179, Expect=1e-55]} {Mouse: ENSMUSG00000025482, Odf3, outer dense fiber of sperm tails 3, [Score=175, Expect=5e-54]} {Dmel: FBgn0032010, CG8086, [RH, Score=117, Expect=4e-31]} {Smed: dd_Smed_v6_2658_0_1, dd_Smed_v6_2658_0_1, [Score=308, Expect=9e-107]} {RNA1509_1519, RNA1509_2082} {RNA1310_25121, RNA1509_1519} {RNA1509_1519, RNA815_11324}
10.	MligTC455_27130	286	5.96	Mlig455_034303	Neo: - Age: Down-Up-Down		0.959	-	-	-	-	-	0.959	Mlig455_034303 {REF} {Length: 3045} {TRANSSPLICED} {Pfam: E3 Ubiquitin Ligase RBR C-terminal domain [PF18091.3, score=22.4]; Zn-finger in Ran binding protein and others [PF00641.20, score=18.0]} {RNA1509_8153} {RNA1310_4894.1} {RNA815_2603.1}
11.	MligTC455_29003	223	4.64	Mlig455_066978	Neo: - Age: -		0.957	-	-	-	-	-	0.957	Mlig455_066978 {REF} {Length: 5329} {RNA1509_29353} {RNA1310_4523} {RNA815_17419}
12.	MligTC455_36102	672	13.99	Mlig455_043535	Neo: - Age: -	CUX1	0.956	-	-	-	-	0.956	-	Mlig455_043535 {REF} {Length: 4531} {Pfam: CUT domain [PF02376.17, score=229.5]; Homeodomain [PF00046.31, score=53.4]; Homeobox KN domain [PF05920.13, score=27.9]} {Human: ENSG00000257923, CUX1, cut like homeobox 1, [Score=191, Expect=6e-49]; ENSG00000111249, CUX2, cut like homeobox 2, [Score=187, Expect=1e-47]} {Mouse: ENSMUSG00000042589, Cux2, cut-like homeobox 2, [RH, Score=192, Expect=2e-49]} {Dmel: FBgn0004198, ct, cut, [RH, Score=145, Expect=1e-34]} {Celegans: WBGene00000464, ceh-44, Homeobox protein cut-like ceh-44, [RH, Score=147, Expect=1e-35]} {Smed: dd_Smed_v6_13843_0_1, dd_Smed_v6_13843_0_1, [RH, Score=131, Expect=7e-31]} {RNA1509_6534} {RNA1310_2215.2} {RNA815_1260}
13.	MligTC455_40741	306	6.38	Mlig455_062243	Neo: - Age: -		0.956	-	-	-	-	-	0.956	Mlig455_062243 {REF} {Length: 1935} {RNA1509_17197, RNA1509_50186} {RNA1310_23515, RNA1509_50186} {RNA1509_50186, RNA815_9818}
14.	MligTC455_53820	155	3.23	Mlig455_065353	Neo: Irradiation Age: Down-Up-Down, logFC(26M/2M)=1.766		0.955	-	-	-	-	-	0.955	Mlig455_065353 {REF} {Length: 2764} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=37.6]; WSC domain [PF01822.21, score=35.0]} {RNA1509_40708} {RNA1310_26224} {RNA815_14744.1}
15.	MligTC455_23669	891	18.56	Mlig455_022955	Neo: - Age: -	TNRC6C	0.954	-	-	-	-	-	0.954	Mlig455_022955 {REF} {Length: 8332} {Pfam: UBA/TS-N domain [PF00627.33, score=32.2]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=21.4]} {Human: ENSG00000078687, TNRC6C, trinucleotide repeat containing 6C, [Score=53.1, Expect=3e-06]} {Mouse: ENSMUSG00000025571, Tnrc6c, trinucleotide repeat containing 6C, [Score=52.8, Expect=3e-06]} {Smed: dd_Smed_v6_2330_0_1, dd_Smed_v6_2330_0_1, [RH, Score=59.7, Expect=9e-09]} {RNA1509_42994, RNA1509_53029} {RNA1310_4153.2, RNA1509_53029} {RNA1509_53029, RNA815_2902}
16.	MligTC455_28986	256	5.33	Mlig455_059441	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.429		0.952	-	-	-	-	-	0.952	Mlig455_059441 {REF} {Length: 1071} {TRANSSPLICED} {RNA1509_45862} {RNA1310_33199, RNA1509_45862} {RNA1509_45862, RNA815_15931}
17.	MligTC455_13848	348	7.26	Mlig455_036175	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.837	TEKT3	0.951	-	-	-	-	-	0.951	Mlig455_036175 {REF} {Length: 2265} {Pfam: Tektin family [PF03148.16, score=371.6]} {Human: ENSG00000125409, TEKT3, tektin 3, [Score=286, Expect=7e-91]} {Mouse: ENSMUSG00000042189, Tekt3, tektin 3, [Score=267, Expect=1e-83]} {Dmel: FBgn0040028, CG17450, [Score=205, Expect=7e-60]} {Smed: dd_Smed_v6_6511_0_1, dd_Smed_v6_6511_0_1, [Score=333, Expect=1e-109]} {RNA1509_15766} {RNA1310_13406, RNA1509_15766} {RNA1509_15766, RNA815_7559}
18.	MligTC455_18347	118	2.46	Mlig455_000821	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.590	KCNA1	0.951	-	-	-	-	-	0.951	Mlig455_000821 {REF} {Length: 3163} {Pfam: Ion transport protein [PF00520.33, score=166.1]; BTB/POZ domain [PF02214.24, score=97.8]; Ion channel [PF07885.18, score=48.4]} {Human: ENSG00000111262, KCNA1, potassium voltage-gated channel subfamily A member 1, [RH, Score=611, Expect=0.0]; ENSG00000177301, KCNA2, potassium voltage-gated channel subfamily A member 2, [RH, Score=611, Expect=0.0]; ENSG00000177272, KCNA3, potassium voltage-gated channel subfamily A member 3, [RH, Score=610, Expect=0.0]; ENSG00000182255, KCNA4, potassium voltage-gated channel subfamily A member 4, [RH, Score=585, Expect=0.0]} {Mouse: ENSMUSG00000040724, Kcna2, potassium voltage-gated channel, shaker-related subfamily, member 2, [RH, Score=611, Expect=0.0]; ENSMUSG00000047976, Kcna1, potassium voltage-gated channel, shaker-related subfamily, member 1, [RH, Score=610, Expect=0.0]; ENSMUSG00000047959, Kcna3, potassium voltage-gated channel, shaker-related subfamily, member 3, [RH, Score=607, Expect=0.0]; ENSMUSG00000042604, Kcna4, potassium voltage-gated channel, shaker-related subfamily, member 4, [RH, Score=587, Expect=0.0]} {Dmel: FBgn0003380, Sh, Shaker, [RH, Score=629, Expect=0.0]} {Celegans: WBGene00014261, shk-1, Potassium voltage-gated channel protein shk-1, [RH, Score=377, Expect=2e-124]} {Smed: dd_Smed_v6_15425_0_1, dd_Smed_v6_15425_0_1, [RH, Score=707, Expect=0.0]} {RNA1509_47579} {RNA1310_8777} {RNA815_4701}

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