M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_47442

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_47442 255 5.31 Mlig455_001051

Neo: -

Age: -

 Mlig455_001051 {REF} {Length: 342} {TRANSSPLICED} {RNA1509_13727} {RNA1310_23632} {RNA815_13707}

Cumulative graph for MligTC455_47442

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.493 2.746 0.79614 1.00000
RegionR2 0.823 2.746 0.39775 0.79231
RegionR3 -0.032 2.746 0.97326 1.00000
RegionR4 0.106 2.746 0.89992 1.00000
RegionR5 0.501 2.746 0.45000 0.81158
RegionR6 -0.123 2.746 0.88283 1.00000
RegionR7 -1.235 2.746 0.35943 0.99572
RegionR8 -0.533 2.746 0.72026 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.551 2.746 0.50344 1.00000
RegenerationR2 1.707 2.746 0.01886 0.22522
RegenerationR3 2.528 2.746 0.00432 0.11895
RegenerationR4 1.357 2.746 0.10496 0.49948
RegenerationR5 1.326 2.746 0.08872 0.45873
RegenerationR6 1.652 2.746 0.06993 0.33131
RegenerationBL 2.205 2.746 0.04656 0.24681
RegenerationTP 2.255 2.746 0.06013 0.39742


Genes with expression patterns similar to MligTC455_47442

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_47442 255 5.31 Mlig455_001051

Neo: -

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_001051 {REF} {Length: 342} {TRANSSPLICED} {RNA1509_13727} {RNA1310_23632} {RNA815_13707}
2. MligTC455_53820 155 3.23 Mlig455_065353

Neo: Irradiation

Age: Down-Up-Down, logFC(26M/2M)=1.766

 2.529 - 0.727 0.823 - - 0.979 Mlig455_065353 {REF} {Length: 2764} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=37.6]; WSC domain [PF01822.21, score=35.0]} {RNA1509_40708} {RNA1310_26224} {RNA815_14744.1}
3. MligTC455_27839 307 6.4 Mlig455_007792

Neo: -

Age: -

 1.776 - - - 0.819 - 0.957 Mlig455_007792 {REF} {Length: 2271} {Pfam: Protein of unknown function (DUF1759) [PF03564.17, score=23.5]; Zinc knuckle [PF00098.25, score=22.0]} {RNA1509_24163} {RNA1310_131.1} {RNA815_52.1}
4. MligTC455_23237 505 10.52 Mlig455_007444

Neo: -

Age: -

 TMEM258 1.774 - - - 0.821 - 0.953 Mlig455_007444 {REF} {Length: 4417} {Pfam: Oligosaccharyltransferase subunit 5 [PF05251.14, score=81.6]} {Human: ENSG00000134825, TMEM258, transmembrane protein 258, [RH, Score=131, Expect=8e-36]} {Mouse: ENSMUSG00000036372, Tmem258, transmembrane protein 258, [RH, Score=131, Expect=6e-36]} {Dmel: FBgn0036667, CG9669, [RH, Score=97.1, Expect=4e-24]} {Celegans: WBGene00021960, Y57E12AM.1, Transmembrane protein 258 homolog, [Score=72.8, Expect=9e-16]} {Smed: dd_Smed_v6_1016_0_1, dd_Smed_v6_1016_0_1, [RH, Score=134, Expect=2e-37]} {RNA1509_16085, RNA1509_43363} {RNA1310_12186, RNA1509_16085, RNA1509_43363} {RNA1509_16085, RNA1509_43363, RNA815_10743}
5. MligTC455_44439 69 1.44 Mlig455_038143

Neo: -

Age: -

 1.745 - - - 0.792 - 0.953 Mlig455_038143 {REF} {Length: 2756} {Pfam: RNase H [PF00075.26, score=36.9]} {RNA1509_18097} {RNA1310_30023} {RNA815_11171.1}
6. MligTC455_30572 88 1.82 Mlig455_009374, Mlig455_026650

Neo: -

Age: Down-Down-Down

 NYNRIN 1.739 - - 0.774 - - 0.965

Mlig455_009374 {REF} {Length: 592} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=104.1]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=103.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=57.8]; Integrase zinc binding domain [PF17921.3, score=56.9]; Integrase core domain [PF00665.28, score=46.3]; gag-polyprotein putative aspartyl protease [PF13975.8, score=22.7]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=71.2, Expect=8e-12]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=72.0, Expect=3e-12]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=262, Expect=3e-73]} {RNA1509_8906} {RNA1310_1712.2} {RNA815_474.1}

Mlig455_026650 {REF} {Length: 3906} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=104.1]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=103.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=57.8]; Integrase zinc binding domain [PF17921.3, score=56.9]; Integrase core domain [PF00665.28, score=46.3]; gag-polyprotein putative aspartyl protease [PF13975.8, score=22.7]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=71.2, Expect=8e-12]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=72.0, Expect=3e-12]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=262, Expect=3e-73]} {RNA1509_8906} {RNA1310_1712.3} {RNA815_474.1}
7. MligTC455_30222 149 3.11 Mlig455_018205

Neo: -

Age: Up-Down-Down

 1.737 0.786 - - - - 0.951 Mlig455_018205 {REF} {Length: 8026} {Pfam: Helitron helicase-like domain at N-terminus [PF14214.8, score=174.6]; PIF1-like helicase [PF05970.16, score=58.2]; AAA domain [PF13604.8, score=24.0]} {Celegans: WBGene00019136, F59H6.5, [Score=569, Expect=2e-178]} {Smed: dd_Smed_v6_91935_0_1, dd_Smed_v6_91935_0_1, [Score=70.9, Expect=3e-14]} {RNA1509_5036} {RNA1310_728.1} {RNA815_356.1}
8. MligTC455_32691 346 7.2 Mlig455_064692

Neo: -

Age: -

 1.717 - - - 0.745 - 0.972 Mlig455_064692 {REF} {Length: 1120} {Pfam: Domain of unknown function (DUF4472) [PF14739.8, score=20.1]} {Mouse: ENSMUSG00000025272, Tro, trophinin, [Score=70.9, Expect=1e-15]} {RNA1310_132693} {RNA815_26782}
9. MligTC455_14656 906 18.87 Mlig455_032710

Neo: -

Age: -

 IKBKE 1.703 - - - - 0.730 0.973 Mlig455_032710 {REF} {Length: 3079} {Pfam: Protein kinase domain [PF00069.27, score=132.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=73.7]; Fungal protein kinase [PF17667.3, score=26.0]} {Human: ENSG00000263528, IKBKE, inhibitor of nuclear factor kappa B kinase subunit epsilon, [RH, Score=223, Expect=1e-62]; ENSG00000183735, TBK1, TANK binding kinase 1, [RH, Score=221, Expect=3e-61]} {Mouse: ENSMUSG00000020115, Tbk1, TANK-binding kinase 1, [RH, Score=224, Expect=1e-62]; ENSMUSG00000042349, Ikbke, inhibitor of kappaB kinase epsilon, [RH, Score=223, Expect=2e-62]} {Dmel: FBgn0086657, IKKepsilon, I-kappaB kinase epsilon, [RH, Score=221, Expect=7e-62]} {Celegans: WBGene00012726, Y39G8B.5, [RH, Score=97.1, Expect=1e-20]} {Smed: dd_Smed_v6_1972_0_1, dd_Smed_v6_1972_0_1, [RH, Score=145, Expect=3e-36]} {RNA1509_10714, RNA1509_1184} {RNA1310_5031.1, RNA1509_10714, RNA1509_1184} {RNA1509_10714, RNA1509_1184, RNA815_1466.1}
10. MligTC455_34007 638 13.3 Mlig455_042214, Mlig455_065850

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.257

 1.69 0.738 - - - - 0.952

Mlig455_042214 {REF} {Length: 4852} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=134.1]; Ankyrin repeats (many copies) [PF13637.8, score=108.4]; Ankyrin repeats (many copies) [PF13857.8, score=71.2]; Ankyrin repeat [PF13606.8, score=64.0]; Ankyrin repeat [PF00023.32, score=32.9]; Family of unknown function (DUF6189) [PF19688.1, score=31.1]; 3,4-dihydroxy-2-butanone 4-phosphate synthase [PF00926.21, score=30.1]; Hepatocyte nuclear factor 1 (HNF-1), alpha isoform C terminus [PF04813.14, score=21.5]} {RNA1509_39348} {RNA1310_21309.1} {RNA815_17914}

Mlig455_065850 {REF} {Length: 4926} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=143.2]; Ankyrin repeats (many copies) [PF13637.8, score=112.8]; Ankyrin repeats (many copies) [PF13857.8, score=67.4]; Ankyrin repeat [PF13606.8, score=61.4]; Family of unknown function (DUF6189) [PF19688.1, score=30.5]; Ankyrin repeat [PF00023.32, score=30.0]; 3,4-dihydroxy-2-butanone 4-phosphate synthase [PF00926.21, score=26.2]} {RNA1509_39348} {RNA1310_21309.1} {RNA815_26798.1}
11. MligTC455_24149 82 1.71 Mlig455_021675

Neo: -

Age: -

 1.685 - - 0.725 - - 0.960 Mlig455_021675 {REF} {Length: 3991} {RNA1310_30193} {RNA815_26107}
12. MligTC455_26385 466 9.71 Mlig455_059633, Mlig455_059646

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.366

Region-enriched R2: 2.192/0.01808

 EML6 1.663 0.708 - - - - 0.955

Mlig455_059633 {REF} {Length: 786} {Pfam: WD domain, G-beta repeat [PF00400.34, score=25.3]} {Human: ENSG00000214595, EML6, echinoderm microtubule associated protein like 6, [Score=77.0, Expect=3e-18]} {Mouse: ENSMUSG00000044072, Eml6, echinoderm microtubule associated protein like 6, [Score=73.9, Expect=4e-17]} {Smed: dd_Smed_v6_10540_0_1, dd_Smed_v6_10540_0_1, [Score=64.3, Expect=4e-14]} {RNA1509_2875} {RNA1310_467.2} {RNA815_8286}

Mlig455_059646 {REF} {Length: 8175} {Pfam: WD domain, G-beta repeat [PF00400.34, score=202.9]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=111.7]; HELP motif [PF03451.16, score=100.8]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=51.5]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=31.0]; Cytochrome D1 heme domain [PF02239.18, score=22.3]; Photosynthesis system II assembly factor YCF48 [PF14870.8, score=22.0]; Nup133 N terminal like [PF08801.13, score=21.4]} {Human: ENSG00000214595, EML6, echinoderm microtubule associated protein like 6, [Score=1999, Expect=0.0]; ENSG00000165521, EML5, echinoderm microtubule associated protein like 5, [Score=1960, Expect=0.0]} {Mouse: ENSMUSG00000044072, Eml6, echinoderm microtubule associated protein like 6, [Score=2049, Expect=0.0]} {Dmel: FBgn0259099, DCX-EMAP, Doublecortin-domain-containing echinoderm-microtubule-associated protein, [Score=197, Expect=3e-51]} {Celegans: WBGene00001248, elp-1, Echinoderm microtubule-associated protein-like elp-1, [Score=150, Expect=2e-36]} {Smed: dd_Smed_v6_10540_0_1, dd_Smed_v6_10540_0_1, [Score=1975, Expect=0.0]} {RNA1509_21786, RNA1509_2875} {RNA1310_467.1, RNA1509_21786} {RNA1509_21786, RNA815_259}
13. MligTC455_09236 361 7.53 Mlig455_069872

Neo: -

Age: -

 0.98 - - - - - 0.980 Mlig455_069872 {REF} {Length: 971} {NoTransDecoderORF} {RNA1509_56890} {RNA1310_8409.1} {RNA815_29944}
14. MligTC455_29003 223 4.64 Mlig455_066978

Neo: -

Age: -

 0.974 - - - - - 0.974 Mlig455_066978 {REF} {Length: 5329} {RNA1509_29353} {RNA1310_4523} {RNA815_17419}
15. MligTC455_53512 916 19.08 Mlig455_028726

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.315

Region-enriched R2: 1.504/0.01018

 IFT172 0.974 - - - - - 0.974 Mlig455_028726 {REF} {Length: 2813} {Pfam: Region in Clathrin and VPS [PF00637.22, score=23.3]; Tetratricopeptide repeat [PF13176.8, score=19.3]} {Human: ENSG00000138002, IFT172, intraflagellar transport 172, [Score=871, Expect=0.0]} {Mouse: ENSMUSG00000038564, Ift172, intraflagellar transport 172, [Score=873, Expect=0.0]} {Dmel: FBgn0035317, Oseg2, Outer segment 2, [Score=546, Expect=5e-173]} {Celegans: WBGene00003883, osm-1, Intraflagellar transport protein osm-1, [Score=517, Expect=2e-162]} {Smed: dd_Smed_v6_10638_0_1, dd_Smed_v6_10638_0_1, [Score=615, Expect=0.0]} {RNA1509_2378} {RNA1310_994} {RNA815_250}
16. MligTC455_35495 586 12.21 Mlig455_023069

Neo: -

Age: -

 PCF11 0.971 - - - - - 0.971 Mlig455_023069 {REF} {Length: 4117} {TRANSSPLICED} {Pfam: CID domain [PF04818.15, score=32.6]} {Human: ENSG00000165494, PCF11, PCF11, cleavage and polyadenylation factor subunit, [RH, Score=91.3, Expect=6e-18]} {Mouse: ENSMUSG00000041328, Pcf11, PCF11 cleavage and polyadenylation factor subunit, [RH, Score=92.4, Expect=2e-18]} {Dmel: FBgn0264962, Pcf11, Protein 1 of cleavage and polyadenylation factor 1, [Score=78.6, Expect=3e-14]} {Smed: dd_Smed_v6_3280_0_1, dd_Smed_v6_3280_0_1, [RH, Score=191, Expect=3e-50]} {RNA1509_13594} {RNA1310_1865.1} {RNA815_5333}
17. MligTC455_53363 477 9.94 Mlig455_042368, Mlig455_069314

Neo: -

Age: Down-Down-Up

Regeneration-enriched BL: 3.828
Regeneration-enriched R5: 2.279

 0.971 - - - - - 0.971

Mlig455_042368 {REF} {Length: 667} {Pfam: Endonuclease-reverse transcriptase [PF14529.8, score=50.7]} {RNA1509_35522} {RNA1310_1411.2} {RNA815_8870}

Mlig455_069314 {REF} {Length: 3392} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=86.3]; Endonuclease-reverse transcriptase [PF14529.8, score=45.3]} {Smed: dd_Smed_v6_16441_0_1, dd_Smed_v6_16441_0_1, [Score=71.6, Expect=8e-13]} {RNA1509_35522} {RNA1310_1411.2} {RNA815_8870}
18. MligTC455_27843 317 6.6 Mlig455_054197

Neo: -

Age: -

Regeneration-enriched R6: 4.237
Regeneration-enriched BL: 4.138

 0.968 - - - - - 0.968 Mlig455_054197 {REF} {Length: 1106} {Pfam: Zinc knuckle [PF00098.25, score=22.3]} {RNA1509_40897} {RNA1310_131.1} {RNA815_52.1}
19. MligTC455_09192 95 1.98 Mlig455_053293

Neo: -

Age: -

 0.966 - - - - - 0.966 Mlig455_053293 {REF} {Length: 767} {RNA1509_44223} {RNA1310_99471} {RNA815_46653}
20. MligTC455_27130 286 5.96 Mlig455_034303

Neo: -

Age: Down-Up-Down

 0.965 - - - - - 0.965 Mlig455_034303 {REF} {Length: 3045} {TRANSSPLICED} {Pfam: E3 Ubiquitin Ligase RBR C-terminal domain [PF18091.3, score=22.4]; Zn-finger in Ran binding protein and others [PF00641.20, score=18.0]} {RNA1509_8153} {RNA1310_4894.1} {RNA815_2603.1}
21. MligTC455_46889 3516 73.26 Mlig455_023304

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.585

Regeneration-depleted TP: -1.241
Regeneration-depleted BL: -1.085

 SLC25A14 0.965 - - - - - 0.965 Mlig455_023304 {REF} {Length: 5464} {Pfam: Mitochondrial carrier protein [PF00153.29, score=159.1]} {Human: ENSG00000102078, SLC25A14, solute carrier family 25 member 14, [Score=216, Expect=1e-68]; ENSG00000174032, SLC25A30, solute carrier family 25 member 30, [Score=213, Expect=2e-68]} {Mouse: ENSMUSG00000031105, Slc25a14, solute carrier family 25 (mitochondrial carrier, brain), member 14, [Score=218, Expect=2e-69]; ENSMUSG00000022003, Slc25a30, solute carrier family 25, member 30, [Score=213, Expect=6e-68]} {Dmel: FBgn0036199, Bmcp, [Score=186, Expect=2e-57]} {Celegans: WBGene00015186, misc-1, MItochondrial Solute Carrier, [Score=137, Expect=1e-38]} {Smed: dd_Smed_v6_8945_0_8, dd_Smed_v6_8945_0_8, [Score=186, Expect=1e-57]} {RNA1509_20867, RNA1509_23992} {RNA1310_10029, RNA1509_20867, RNA1509_23992} {RNA1509_20867, RNA1509_23992, RNA815_7763.1}
22. MligTC455_21640 262 5.46 Mlig455_052657

Neo: -

Age: -

 SLC6A5 0.964 - - - - - 0.964 Mlig455_052657 {REF} {Length: 4833} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=583.6]; BTB/POZ domain [PF00651.33, score=59.5]; BTB And C-terminal Kelch [PF07707.17, score=44.3]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=24.7]; Protein of unknown function (DUF2722) [PF10846.10, score=18.1]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=316, Expect=2e-92]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=315, Expect=5e-92]} {Dmel: FBgn0034911, CG5549, [Score=313, Expect=5e-89]} {Celegans: WBGene00000934, dat-1, Sodium-dependent dopamine transporter, [Score=228, Expect=2e-63]} {Smed: dd_Smed_v6_10458_0_1, dd_Smed_v6_10458_0_1, [Score=273, Expect=1e-78]} {RNA1509_27437} {RNA1310_7302.1} {RNA815_3821}
23. MligTC455_24520 255 5.3 Mlig455_026510

Neo: -

Age: Up-Down-Down

 DNAH10 0.964 - - - - - 0.964 Mlig455_026510 {REF} {Length: 13148} {Pfam: Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=521.2]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=432.5]; Dynein heavy chain, N-terminal region 1 [PF08385.14, score=367.7]; P-loop containing dynein motor region D4 [PF12780.9, score=341.6]; ATP-binding dynein motor region [PF12781.9, score=282.3]; P-loop containing dynein motor region [PF12775.9, score=262.5]; Microtubule-binding stalk of dynein motor [PF12777.9, score=214.2]; Dynein heavy chain AAA lid domain [PF18198.3, score=174.5]; Dynein heavy chain region D6 P-loop domain [PF03028.17, score=141.6]; Dynein heavy chain C-terminal domain [PF18199.3, score=124.9]; AAA domain (dynein-related subfamily) [PF07728.16, score=91.3]; Dynein heavy chain AAA lid domain [PF17852.3, score=82.7]; AAA+ lid domain [PF17857.3, score=62.7]; AAA domain [PF13401.8, score=38.9]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=35.5]; AAA ATPase domain [PF13191.8, score=26.3]; AAA domain [PF13238.8, score=23.3]; Sigma-54 interaction domain [PF14532.8, score=20.3]; Sigma-54 interaction domain [PF00158.28, score=20.2]; MoxR domain in the MoxR-vWA-beta-propeller ternary systems [PF20030.1, score=19.8]} {Human: ENSG00000197653, DNAH10, dynein axonemal heavy chain 10, [RH, Score=5142, Expect=0.0]} {Mouse: ENSMUSG00000038011, Dnah10, dynein, axonemal, heavy chain 10, [RH, Score=5333, Expect=0.0]} {Dmel: FBgn0013813, Dhc98D, Dynein heavy chain at 89D, [RH, Score=3887, Expect=0.0]} {Celegans: WBGene00000962, dhc-1, Dynein heavy chain, cytoplasmic, [Score=1402, Expect=0.0]} {Smed: dd_Smed_v6_5169_0_1, dd_Smed_v6_5169_0_1, [Score=4445, Expect=0.0]} {RNA1509_2715} {RNA1310_40.1} {RNA815_20}
24. MligTC455_23815 152 3.16 Mlig455_002411, Mlig455_015380

Neo: -

Age: -

 0.962 - - - - - 0.962

Mlig455_002411 {REF} {Length: 1686} {NoTransDecoderORF} {RNA1509_18763} {RNA1310_17835} {RNA815_29786}

Mlig455_015380 {REF} {Length: 1667} {NoTransDecoderORF} {RNA1509_18763} {RNA1310_19291} {RNA815_29786}
25. MligTC455_41575 418 8.71 Mlig455_012538

Neo: -

Age: Down-Up-Down

 0.962 - - - - - 0.962 Mlig455_012538 {REF} {Length: 1233} {Pfam: EF hand [PF00036.34, score=47.8]; EF-hand domain pair [PF13499.8, score=46.4]; EF-hand domain [PF13405.8, score=44.3]; EF-hand domain pair [PF13833.8, score=26.5]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=24.4]; EF hand [PF13202.8, score=19.8]} {Dmel: FBgn0036926, CG7646, [Score=48.5, Expect=1e-07]} {Celegans: WBGene00003564, ncs-2, Neuronal calcium sensor 2, [Score=42.7, Expect=1e-05]} {RNA1509_17148} {RNA1310_42976, RNA1509_17148} {RNA1509_17148, RNA815_19784.1}
26. MligTC455_52007 174 3.62 Mlig455_000025

Neo: -

Age: -

 0.962 - - - - - 0.962 Mlig455_000025 {REF} {Length: 2308} {RNA1509_17229} {RNA1310_41318.2} {RNA815_54103}
27. MligTC455_37586 700 14.58 Mlig455_051033

Neo: -

Age: Up-Down-Down

 MFSD10 0.961 - - - - - 0.961 Mlig455_051033 {REF} {Length: 4118} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=110.4]; MFS_1 like family [PF12832.9, score=36.5]; Sugar (and other) transporter [PF00083.26, score=31.8]} {Human: ENSG00000109736, MFSD10, major facilitator superfamily domain containing 10, [Score=52.4, Expect=1e-06]} {Mouse: ENSMUSG00000001082, Mfsd10, major facilitator superfamily domain containing 10, [Score=57.4, Expect=1e-08]} {Celegans: WBGene00017339, F10D7.2, [Score=57.4, Expect=1e-08]} {RNA1509_36151} {RNA1310_15615} {RNA815_30478}
28. MligTC455_35007 995 20.72 Mlig455_067944

Neo: -

Age: -

 0.96 - - - - - 0.960 Mlig455_067944 {REF} {Length: 5148} {TRANSSPLICED} {Pfam: PIH1 CS-like domain [PF18201.3, score=24.2]} {Smed: dd_Smed_v6_9306_0_1, dd_Smed_v6_9306_0_1, [RH, Score=51.6, Expect=3e-07]} {RNA1509_25123} {RNA1310_13149.1, RNA1509_25123} {RNA1509_25123, RNA815_11266}
29. MligTC455_08310 465 9.68 Mlig455_027082

Neo: -

Age: -

Region-enriched R2: 1.747/0.03234

 0.959 - - - - - 0.959 Mlig455_027082 {REF} {Length: 2992} {TRANSSPLICED} {RNA1509_26760, RNA1509_28914, RNA1509_42937} {RNA1310_5574.1, RNA1509_26760, RNA1509_28914, RNA1509_42937} {RNA1509_26760, RNA1509_28914, RNA1509_42937, RNA815_9311}
30. MligTC455_18126 1010 21.04 Mlig455_004944, Mlig455_019712

Neo: -

Age: -

Region-enriched R2: 2.788/0.00294

 BBOF1 0.959 - - - - - 0.959

Mlig455_004944 {REF} {Length: 2657} {Pfam: Domain of unknown function (DUF4515) [PF14988.8, score=61.7]} {Human: ENSG00000119636, BBOF1, basal body orientation factor 1, [Score=286, Expect=6e-90]} {Mouse: ENSMUSG00000057265, Bbof1, basal body orientation factor 1, [Score=277, Expect=3e-86]} {Dmel: FBgn0036962, CG17122, [Score=54.3, Expect=2e-07]} {Smed: dd_Smed_v6_9328_0_1, dd_Smed_v6_9328_0_1, [Score=384, Expect=6e-128]} {RNA1509_2114} {RNA1310_13083.1} {RNA815_4465}

Mlig455_019712 {REF} {Length: 3477} {Pfam: Domain of unknown function (DUF4515) [PF14988.8, score=61.5]} {Human: ENSG00000119636, BBOF1, basal body orientation factor 1, [RH, Score=335, Expect=2e-108]} {Mouse: ENSMUSG00000057265, Bbof1, basal body orientation factor 1, [RH, Score=320, Expect=7e-103]} {Dmel: FBgn0036962, CG17122, [Score=55.5, Expect=9e-08]} {Smed: dd_Smed_v6_9328_0_1, dd_Smed_v6_9328_0_1, [RH, Score=427, Expect=2e-144]} {RNA1509_2114} {RNA1310_13083.1, RNA1509_2114} {RNA1509_2114, RNA815_4465}
31. MligTC455_34224 312 6.5 Mlig455_015246, Mlig455_056676, Mlig455_070843

Neo: -

Age: -

 0.959 - - - - - 0.959

Mlig455_015246 {REF} {Length: 251} {RNA1509_46811} {RNA1310_82283} {RNA815_19376}

Mlig455_056676 {REF} {Length: 366} {RNA1509_30941} {RNA1310_82283} {RNA815_19376}

Mlig455_070843 {REF} {Length: 312} {RNA1509_30941} {RNA1310_82283} {RNA815_19376}
32. MligTC455_44923 1476 30.74 Mlig455_042352, Mlig455_047121

Neo: -

Age: Down-Up-Up

 WDR34 0.959 - - - - - 0.959

Mlig455_042352 {REF} {Length: 2248} {TRANSSPLICED} {RNA1509_10795} {RNA1310_10379} {RNA815_12215.1}

Mlig455_047121 {REF} {Length: 2263} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=25.1]} {Human: ENSG00000119333, WDR34, WD repeat domain 34, [Score=124, Expect=1e-29]} {Mouse: ENSMUSG00000039715, Wdr34, WD repeat domain 34, [Score=119, Expect=3e-28]} {Smed: dd_Smed_v6_14428_0_1, dd_Smed_v6_14428_0_1, [RH, Score=169, Expect=1e-45]} {RNA1509_10795} {RNA1310_10379, RNA1509_10795} {RNA1509_10795, RNA815_12215.1}
33. MligTC455_09133 164 3.42 Mlig455_005553

Neo: -

Age: -

 0.958 - - - - - 0.958 Mlig455_005553 {REF} {Length: 504} {RNA1509_44223} {RNA1310_54802} {RNA815_64986}
34. MligTC455_15992 222 4.63 Mlig455_062899

Neo: -

Age: Up-Up-Down

 0.958 - - - - - 0.958 Mlig455_062899 {REF} {Length: 2159} {RNA1509_41203} {RNA1310_21857} {RNA815_12774}
35. MligTC455_29016 36522 760.88 Mlig455_005202

Neo: -

Age: -

Regeneration-enriched R1: 3.026
Regeneration-enriched TP: 2.300
Regeneration-enriched BL: 2.050

 0.958 - - - - - 0.958 Mlig455_005202 {REF} {Length: 920} {TRANSSPLICED} {RNA1509_22244} {RNA1310_14527} {RNA815_7836.1}
36. MligTC455_36202 391 8.16 Mlig455_047412

Neo: -

Age: -

Region-enriched R4: 2.275/0.02192

 0.958 - - - - - 0.958 Mlig455_047412 {REF} {Length: 1289} {Pfam: Septum formation initiator [PF04977.17, score=26.2]; Homeobox associated leucine zipper [PF02183.20, score=23.7]; bZIP transcription factor [PF00170.23, score=20.9]; Cell division protein ZapB [PF06005.14, score=20.3]} {RNA1310_27421} {RNA815_13556}
37. MligTC455_48867 274 5.71 Mlig455_052014

Neo: -

Age: -

 CAPS2 0.958 - - - - - 0.958 Mlig455_052014 {REF} {Length: 3413} {TRANSSPLICED} {Human: ENSG00000180881, CAPS2, calcyphosine 2, [RH, Score=207, Expect=4e-60]} {Mouse: ENSMUSG00000035694, Caps2, calcyphosphine 2, [RH, Score=225, Expect=6e-65]} {Dmel: FBgn0051345, CG31345, [Score=63.5, Expect=5e-11]} {Smed: dd_Smed_v6_7209_0_1, dd_Smed_v6_7209_0_1, [Score=70.9, Expect=7e-14]} {RNA1509_44692} {RNA1310_9646.2, RNA1509_44692} {RNA1509_44692, RNA815_2138.1}
38. MligTC455_54198 93 1.94 Mlig455_034665

Neo: -

Age: -

 0.958 - - - - - 0.958 Mlig455_034665 {REF} {Length: 2068} {Pfam: PMP-22/EMP/MP20/Claudin family [PF00822.22, score=31.6]} {Smed: dd_Smed_v6_16515_0_1, dd_Smed_v6_16515_0_1, [Score=90.9, Expect=8e-22]} {RNA1310_64595} {RNA815_48948}
39. MligTC455_11042 103 2.15 Mlig455_050306

Neo: Int S/G2/M

Age: -

 0.957 - - - - - 0.957 Mlig455_050306 {REF} {Length: 849} {NoTransDecoderORF} {RNA1310_65300} {RNA815_27023}
40. MligTC455_23669 891 18.56 Mlig455_022955

Neo: -

Age: -

 TNRC6C 0.957 - - - - - 0.957 Mlig455_022955 {REF} {Length: 8332} {Pfam: UBA/TS-N domain [PF00627.33, score=32.2]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=21.4]} {Human: ENSG00000078687, TNRC6C, trinucleotide repeat containing 6C, [Score=53.1, Expect=3e-06]} {Mouse: ENSMUSG00000025571, Tnrc6c, trinucleotide repeat containing 6C, [Score=52.8, Expect=3e-06]} {Smed: dd_Smed_v6_2330_0_1, dd_Smed_v6_2330_0_1, [RH, Score=59.7, Expect=9e-09]} {RNA1509_42994, RNA1509_53029} {RNA1310_4153.2, RNA1509_53029} {RNA1509_53029, RNA815_2902}
41. MligTC455_46888 3493 72.77 Mlig455_023236

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.334

Regeneration-downregulated TP: -1.196

Regeneration-depleted TP: -1.196

 SLC25A14 0.957 - - - - - 0.957 Mlig455_023236 {REF} {Length: 4876} {Pfam: Mitochondrial carrier protein [PF00153.29, score=159.1]} {Human: ENSG00000102078, SLC25A14, solute carrier family 25 member 14, [Score=216, Expect=1e-68]; ENSG00000174032, SLC25A30, solute carrier family 25 member 30, [Score=213, Expect=2e-68]} {Mouse: ENSMUSG00000031105, Slc25a14, solute carrier family 25 (mitochondrial carrier, brain), member 14, [Score=218, Expect=2e-69]; ENSMUSG00000022003, Slc25a30, solute carrier family 25, member 30, [Score=213, Expect=6e-68]} {Dmel: FBgn0036199, Bmcp, [Score=186, Expect=2e-57]} {Celegans: WBGene00015186, misc-1, MItochondrial Solute Carrier, [Score=137, Expect=1e-38]} {Smed: dd_Smed_v6_8945_0_8, dd_Smed_v6_8945_0_8, [Score=186, Expect=1e-57]} {RNA1509_23992, RNA1509_51810} {RNA1310_10029, RNA1509_51810} {RNA1509_51810, RNA815_7763.1}
42. MligTC455_13864 257 5.36 Mlig455_036449

Neo: -

Age: logFC(26M/2M)=-0.407

 0.956 - - - - - 0.956 Mlig455_036449 {REF} {Length: 2721} {RNA1509_33524, RNA1509_45606} {RNA1310_15271, RNA1509_33524, RNA1509_45606} {RNA1509_33524, RNA1509_45606, RNA815_24673}
43. MligTC455_29281 1359 28.31 Mlig455_000186, Mlig455_067707

Neo: -

Age: -

 RPS20, SLMAP 0.956 - - - - - 0.956

Mlig455_000186 {REF} {Length: 4189} {Pfam: FHA domain [PF00498.28, score=65.5]; Fez1 [PF06818.17, score=20.8]; Inner membrane component of T3SS, cytoplasmic domain [PF16697.7, score=19.0]} {Human: ENSG00000163681, SLMAP, sarcolemma associated protein, [RH, Score=254, Expect=7e-74]} {Mouse: ENSMUSG00000021870, Slmap, sarcolemma associated protein, [RH, Score=252, Expect=2e-73]} {Dmel: FBgn0040011, Slmap, Sarcolemma associated protein, [Score=186, Expect=1e-49]} {Celegans: WBGene00019766, M4.1, [RH, Score=202, Expect=7e-57]} {Smed: dd_Smed_v6_3763_0_5, dd_Smed_v6_3763_0_5, [Score=247, Expect=3e-75]} {RNA1509_20169} {RNA1310_5284.1} {RNA815_8488}

Mlig455_067707 {REF} {Length: 4007} {TRANSSPLICED} {Pfam: Ribosomal protein S10p/S20e [PF00338.24, score=51.0]} {Human: ENSG00000008988, RPS20, ribosomal protein S20, [Score=132, Expect=2e-36]} {Mouse: ENSMUSG00000028234, Rps20, ribosomal protein S20, [Score=132, Expect=2e-36]} {Dmel: FBgn0019936, RpS20, Ribosomal protein S20, [Score=128, Expect=6e-35]} {Celegans: WBGene00004489, rps-20, Ribosomal Protein, Small subunit, [Score=128, Expect=3e-35]} {Smed: dd_Smed_v6_123_0_2, dd_Smed_v6_123_0_2, [Score=107, Expect=1e-27]} {RNA1509_20169} {RNA1310_5284.1} {RNA815_8488}
44. MligTC455_30612 1648 34.34 Mlig455_025064, Mlig455_025079

Neo: -

Age: -

Regeneration-upregulated BL: 1.362

Regeneration-enriched BL: 1.362

 HCK 0.956 - - - - - 0.956

Mlig455_025064 {REF} {Length: 4379} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=313.8]; Protein kinase domain [PF00069.27, score=164.9]; SH2 domain [PF00017.26, score=61.6]; SH3 domain [PF00018.30, score=49.4]; Variant SH3 domain [PF14604.8, score=42.0]; Variant SH3 domain [PF07653.19, score=32.2]; ABC1 atypical kinase-like domain [PF03109.18, score=23.9]; Haspin like kinase domain [PF12330.10, score=18.8]} {Human: ENSG00000101336, HCK, HCK proto-oncogene, Src family tyrosine kinase, [RH, Score=444, Expect=2e-151]} {Mouse: ENSMUSG00000042228, Lyn, LYN proto-oncogene, Src family tyrosine kinase, [RH, Score=441, Expect=2e-150]} {Dmel: FBgn0264959, Src42A, Src oncogene at 42A, [Score=446, Expect=4e-152]} {Celegans: WBGene00005077, src-1, Tyrosine protein-kinase src-1, [Score=420, Expect=1e-142]} {Smed: dd_Smed_v6_3147_0_1, dd_Smed_v6_3147_0_1, [RH, Score=601, Expect=0.0]} {RNA1509_7905} {RNA1310_7339} {RNA815_2133.1}

Mlig455_025079 {REF} {Length: 4392} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=313.8]; Protein kinase domain [PF00069.27, score=164.9]; SH2 domain [PF00017.26, score=61.6]; SH3 domain [PF00018.30, score=49.4]; Variant SH3 domain [PF14604.8, score=42.0]; Variant SH3 domain [PF07653.19, score=32.2]; ABC1 atypical kinase-like domain [PF03109.18, score=23.9]; Haspin like kinase domain [PF12330.10, score=18.8]} {Human: ENSG00000101336, HCK, HCK proto-oncogene, Src family tyrosine kinase, [RH, Score=444, Expect=2e-151]} {Mouse: ENSMUSG00000042228, Lyn, LYN proto-oncogene, Src family tyrosine kinase, [RH, Score=441, Expect=2e-150]} {Dmel: FBgn0264959, Src42A, Src oncogene at 42A, [Score=446, Expect=4e-152]} {Celegans: WBGene00005077, src-1, Tyrosine protein-kinase src-1, [Score=420, Expect=1e-142]} {Smed: dd_Smed_v6_3147_0_1, dd_Smed_v6_3147_0_1, [RH, Score=601, Expect=0.0]} {RNA1509_7905} {RNA1310_7339, RNA1509_7905} {RNA1509_7905, RNA815_2133.1}
45. MligTC455_38195 432 9.01 Mlig455_063704

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.492

 TRPM1 0.956 - - - - - 0.956 Mlig455_063704 {REF} {Length: 5184} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=94.9]; Ankyrin repeats (many copies) [PF13637.8, score=83.0]; Ankyrin repeats (many copies) [PF13857.8, score=63.8]; Ankyrin repeat [PF13606.8, score=61.6]; Ankyrin repeat [PF00023.32, score=55.8]; Ion transport protein [PF00520.33, score=53.8]} {Human: ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=132, Expect=2e-30]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=132, Expect=2e-30]; ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=129, Expect=1e-29]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=131, Expect=3e-30]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=129, Expect=9e-30]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=118, Expect=2e-26]} {Celegans: WBGene00001796, gtl-2, Gon-Two Like (TRP subfamily), [Score=79.0, Expect=2e-14]} {Smed: dd_Smed_v6_10717_0_1, dd_Smed_v6_10717_0_1, [RH, Score=189, Expect=2e-49]} {RNA1509_33075, RNA1509_41062, RNA1509_48059, RNA1509_9269} {RNA1310_4916, RNA1509_33075, RNA1509_41062, RNA1509_48059, RNA1509_9269} {RNA1509_33075, RNA1509_41062, RNA1509_48059, RNA1509_9269, RNA815_3093}
46. MligTC455_19092 301 6.28 Mlig455_007632, Mlig455_058917, Mlig455_063013

Neo: -

Age: -

 0.955 - - - - - 0.955

Mlig455_007632 {REF} {Length: 887} {NoTransDecoderORF} {RNA1509_32997, RNA1509_46664} {RNA1310_7467, RNA1509_46664} {RNA1509_46664, RNA815_50376}

Mlig455_058917 {REF} {Length: 431} {NoTransDecoderORF} {RNA1509_32997} {RNA1310_7467} {RNA815_50376}

Mlig455_063013 {REF} {Length: 730} {NoTransDecoderORF} {RNA1509_32997} {RNA1310_7467} {RNA815_50376}
47. MligTC455_21934 77 1.61 Mlig455_020387

Neo: -

Age: -

 NRDC 0.955 - - - - - 0.955 Mlig455_020387 {REF} {Length: 3129} {Pfam: Middle or third domain of peptidase_M16 [PF16187.7, score=167.1]; Insulinase (Peptidase family M16) [PF00675.22, score=105.9]; Peptidase M16 inactive domain [PF05193.23, score=42.9]} {Human: ENSG00000078618, NRDC, nardilysin convertase, [RH, Score=370, Expect=4e-113]} {Mouse: ENSMUSG00000053510, Nrd1, nardilysin, N-arginine dibasic convertase, NRD convertase 1, [Score=367, Expect=8e-110]} {Dmel: FBgn0030344, Nrd1, Nardilysin, [Score=302, Expect=2e-87]} {Celegans: WBGene00013492, Y70C5C.1, [Score=251, Expect=5e-70]} {Smed: dd_Smed_v6_5554_0_1, dd_Smed_v6_5554_0_1, [Score=382, Expect=8e-118]} {RNA1509_40936, RNA1509_4265} {RNA1310_4387.1, RNA1509_40936} {RNA1509_40936, RNA815_925.1}
48. MligTC455_23139 144 2.99 Mlig455_035186

Neo: -

Age: -

 0.955 - - - - - 0.955 Mlig455_035186 {REF} {Length: 416} {NoTransDecoderORF} {RNA1509_23857} {RNA1310_64187}
49. MligTC455_27848 604 12.58 Mlig455_019526, Mlig455_036505

Neo: -

Age: -

Regeneration-upregulated BL: 4.388

Regeneration-enriched BL: 4.388

 0.955 - - - - - 0.955

Mlig455_019526 {REF} {Length: 1253} {Pfam: Zinc knuckle [PF00098.25, score=21.9]} {RNA1509_24163} {RNA1310_131.1} {RNA815_52.1}

Mlig455_036505 {REF} {Length: 2621} {TRANSSPLICED} {Pfam: Zinc knuckle [PF00098.25, score=21.6]} {RNA1509_24163} {RNA1310_131.1} {RNA815_52.1}
50. MligTC455_34756 279 5.81 Mlig455_003615, Mlig455_041585

Neo: -

Age: -

 BBS5 0.955 - - - - - 0.955

Mlig455_003615 {REF} {Length: 2204} {Pfam: Bardet-Biedl syndrome 5 protein [PF07289.13, score=396.4]} {Human: ENSG00000163093, BBS5, Bardet-Biedl syndrome 5, [Score=376, Expect=2e-130]} {Mouse: ENSMUSG00000063145, Bbs5, Bardet-Biedl syndrome 5 (human), [Score=384, Expect=1e-133]} {Dmel: FBgn0037280, CG1126, [Score=264, Expect=3e-86]} {Celegans: WBGene00010974, bbs-5, Bardet-Biedl syndrome 5 protein homolog, [Score=286, Expect=2e-95]} {Smed: dd_Smed_v6_8523_0_1, dd_Smed_v6_8523_0_1, [Score=374, Expect=6e-130]} {RNA1509_35189} {RNA1310_15766} {RNA815_8105.1}

Mlig455_041585 {REF} {Length: 1770} {Pfam: Bardet-Biedl syndrome 5 protein [PF07289.13, score=476.9]} {Human: ENSG00000163093, BBS5, Bardet-Biedl syndrome 5, [RH, Score=450, Expect=4e-159]} {Mouse: ENSMUSG00000063145, Bbs5, Bardet-Biedl syndrome 5 (human), [RH, Score=456, Expect=1e-161]} {Dmel: FBgn0037280, CG1126, [RH, Score=313, Expect=4e-105]} {Celegans: WBGene00010974, bbs-5, Bardet-Biedl syndrome 5 protein homolog, [RH, Score=337, Expect=7e-115]} {Smed: dd_Smed_v6_8523_0_1, dd_Smed_v6_8523_0_1, [RH, Score=434, Expect=4e-153]} {RNA1509_35189} {RNA1310_15766} {RNA815_8105.1}
51. MligTC455_36103 133 2.77 Mlig455_049271

Neo: -

Age: -

 CRBN 0.955 - - - - - 0.955 Mlig455_049271 {REF} {Length: 1980} {TRANSSPLICED} {Pfam: Yippee zinc-binding/DNA-binding /Mis18, centromere assembly [PF03226.16, score=32.4]} {Human: ENSG00000113851, CRBN, cereblon, [RH, Score=215, Expect=1e-63]} {Mouse: ENSMUSG00000005362, Crbn, cereblon, [RH, Score=211, Expect=3e-62]} {Dmel: FBgn0037780, ohgt, ohgata, [RH, Score=119, Expect=3e-28]} {Celegans: WBGene00010891, M18.6, [RH, Score=64.3, Expect=8e-11]} {Smed: dd_Smed_v6_9305_0_1, dd_Smed_v6_9305_0_1, [RH, Score=187, Expect=9e-53]} {RNA1509_21882} {RNA1310_14349} {RNA815_13604}
52. MligTC455_18347 118 2.46 Mlig455_000821

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.590

 KCNA1 0.954 - - - - - 0.954 Mlig455_000821 {REF} {Length: 3163} {Pfam: Ion transport protein [PF00520.33, score=166.1]; BTB/POZ domain [PF02214.24, score=97.8]; Ion channel [PF07885.18, score=48.4]} {Human: ENSG00000111262, KCNA1, potassium voltage-gated channel subfamily A member 1, [RH, Score=611, Expect=0.0]; ENSG00000177301, KCNA2, potassium voltage-gated channel subfamily A member 2, [RH, Score=611, Expect=0.0]; ENSG00000177272, KCNA3, potassium voltage-gated channel subfamily A member 3, [RH, Score=610, Expect=0.0]; ENSG00000182255, KCNA4, potassium voltage-gated channel subfamily A member 4, [RH, Score=585, Expect=0.0]} {Mouse: ENSMUSG00000040724, Kcna2, potassium voltage-gated channel, shaker-related subfamily, member 2, [RH, Score=611, Expect=0.0]; ENSMUSG00000047976, Kcna1, potassium voltage-gated channel, shaker-related subfamily, member 1, [RH, Score=610, Expect=0.0]; ENSMUSG00000047959, Kcna3, potassium voltage-gated channel, shaker-related subfamily, member 3, [RH, Score=607, Expect=0.0]; ENSMUSG00000042604, Kcna4, potassium voltage-gated channel, shaker-related subfamily, member 4, [RH, Score=587, Expect=0.0]} {Dmel: FBgn0003380, Sh, Shaker, [RH, Score=629, Expect=0.0]} {Celegans: WBGene00014261, shk-1, Potassium voltage-gated channel protein shk-1, [RH, Score=377, Expect=2e-124]} {Smed: dd_Smed_v6_15425_0_1, dd_Smed_v6_15425_0_1, [RH, Score=707, Expect=0.0]} {RNA1509_47579} {RNA1310_8777} {RNA815_4701}
53. MligTC455_41490 671 13.98 Mlig455_036298

Neo: -

Age: -

 TMEM30B 0.954 - - - - - 0.954 Mlig455_036298 {REF} {Length: 2425} {TRANSSPLICED} {Pfam: LEM3 (ligand-effect modulator 3) family / CDC50 family [PF03381.17, score=300.8]} {Human: ENSG00000182107, TMEM30B, transmembrane protein 30B, [RH, Score=253, Expect=2e-81]; ENSG00000112697, TMEM30A, transmembrane protein 30A, [RH, Score=247, Expect=7e-79]} {Mouse: ENSMUSG00000034435, Tmem30b, transmembrane protein 30B, [RH, Score=247, Expect=4e-79]; ENSMUSG00000032328, Tmem30a, transmembrane protein 30A, [RH, Score=247, Expect=4e-79]} {Dmel: FBgn0030752, CG9947, [Score=274, Expect=6e-90]} {Celegans: WBGene00019946, chat-1, CDC50 family protein chat-1, [Score=264, Expect=3e-86]} {Smed: dd_Smed_v6_6430_0_1, dd_Smed_v6_6430_0_1, [RH, Score=321, Expect=1e-108]} {RNA1509_3812} {RNA1310_18859} {RNA815_8438}
54. MligTC455_08309 157 3.27 Mlig455_026925

Neo: -

Age: -

 0.953 - - - - - 0.953 Mlig455_026925 {REF} {Length: 3129} {TRANSSPLICED} {RNA1509_28914} {RNA1310_5574.1} {RNA815_9311}
55. MligTC455_13668 96 2 Mlig455_023384, Mlig455_046960

Neo: -

Age: -

 0.953 - - 0.953 - - -

Mlig455_023384 {REF} {Length: 2160} {TRANSSPLICED} {Pfam: ZIP Zinc transporter [PF02535.24, score=35.3]} {RNA1310_20142} {RNA815_41721}

Mlig455_046960 {REF} {Length: 2159} {TRANSSPLICED} {Pfam: ZIP Zinc transporter [PF02535.24, score=35.3]} {RNA1310_20142} {RNA815_41721}
56. MligTC455_35868 384 7.99 Mlig455_011681, Mlig455_037350, Mlig455_037933, Mlig455_066124

Neo: -

Age: -

 0.953 - - - - - 0.953

Mlig455_011681 {REF} {Length: 1192} {NoTransDecoderORF} {RNA1509_51528} {RNA1310_138888} {RNA815_38499}

Mlig455_037350 {REF} {Length: 573} {NoTransDecoderORF} {RNA1310_33225.1} {RNA815_38499}

Mlig455_037933 {REF} {Length: 218} {NoTransDecoderORF} {RNA1310_64101} {RNA815_38499}

Mlig455_066124 {REF} {Length: 4952} {Pfam: Domain of unknown function (DUF4956) [PF16316.7, score=19.2]} {RNA1509_56926} {RNA1310_49079} {RNA815_20842.1}
57. MligTC455_44972 344 7.16 Mlig455_020200

Neo: -

Age: -

 CEP72 0.953 - - - - - 0.953 Mlig455_020200 {REF} {Length: 3284} {Pfam: Leucine-rich repeat [PF14580.8, score=42.1]} {Human: ENSG00000112877, CEP72, centrosomal protein 72, [RH, Score=149, Expect=4e-37]; ENSG00000280688, CEP72, centrosomal protein 72, [RH, Score=143, Expect=3e-39]} {Mouse: ENSMUSG00000021572, Cep72, centrosomal protein 72, [RH, Score=153, Expect=1e-38]} {Smed: dd_Smed_v6_12835_0_1, dd_Smed_v6_12835_0_1, [RH, Score=174, Expect=3e-47]} {RNA1509_31408} {RNA1310_4875, RNA1509_31408} {RNA1509_31408, RNA815_15532}
58. MligTC455_07654 364 7.59 Mlig455_005644, Mlig455_008675

Neo: -

Age: logFC(26M/2M)=-0.220

Region-enriched R5: 1.830/0.03192

 DNAAF4 0.952 - - - - - 0.952

Mlig455_005644 {REF} {Length: 2398} {Pfam: Tetratricopeptide repeat [PF07719.19, score=41.1]; TPR repeat [PF13414.8, score=32.0]; Tetratricopeptide repeat [PF00515.30, score=31.1]; CS domain [PF04969.18, score=29.8]; Tetratricopeptide repeat [PF13424.8, score=20.3]; Tetratricopeptide repeat [PF13181.8, score=20.0]} {Human: ENSG00000256061, DNAAF4, dynein axonemal assembly factor 4, [RH, Score=254, Expect=5e-80]} {Mouse: ENSMUSG00000092192, Dyx1c1, dyslexia susceptibility 1 candidate 1, [RH, Score=247, Expect=2e-77]; ENSMUSG00000089865, Gm44503, predicted readthrough transcript (NMD candidate), 44503, [RH, Score=241, Expect=1e-75]} {Dmel: FBgn0024352, Stip1, Stress induced phosphoprotein 1, [Score=62.8, Expect=2e-10]} {Celegans: WBGene00019983, sti-1, Stress-induced-phosphoprotein 1, [Score=53.5, Expect=1e-07]} {Smed: dd_Smed_v6_12396_0_1, dd_Smed_v6_12396_0_1, [RH, Score=283, Expect=1e-91]} {RNA1509_9753} {RNA1310_17861} {RNA815_7165}

Mlig455_008675 {REF} {Length: 1981} {Pfam: Tetratricopeptide repeat [PF07719.19, score=41.2]; TPR repeat [PF13414.8, score=32.1]; Tetratricopeptide repeat [PF00515.30, score=31.2]; CS domain [PF04969.18, score=29.9]; Tetratricopeptide repeat [PF13424.8, score=20.3]; Tetratricopeptide repeat [PF13181.8, score=20.1]} {Human: ENSG00000256061, DNAAF4, dynein axonemal assembly factor 4, [RH, Score=254, Expect=4e-80]} {Mouse: ENSMUSG00000092192, Dyx1c1, dyslexia susceptibility 1 candidate 1, [RH, Score=247, Expect=1e-77]; ENSMUSG00000089865, Gm44503, predicted readthrough transcript (NMD candidate), 44503, [RH, Score=241, Expect=9e-76]} {Dmel: FBgn0024352, Stip1, Stress induced phosphoprotein 1, [Score=63.2, Expect=2e-10]} {Celegans: WBGene00019983, sti-1, Stress-induced-phosphoprotein 1, [Score=53.9, Expect=8e-08]} {Smed: dd_Smed_v6_12396_0_1, dd_Smed_v6_12396_0_1, [RH, Score=283, Expect=4e-92]} {RNA1509_20118, RNA1509_9753} {RNA1310_17861, RNA1509_20118} {RNA1509_20118, RNA815_7165}
59. MligTC455_18538 123 2.57 Mlig455_003237

Neo: -

Age: Down-Up-Down

 0.952 - - - - - 0.952 Mlig455_003237 {REF} {Length: 1942} {TRANSSPLICED} {RNA1509_26065} {RNA1310_25777} {RNA815_10492}
60. MligTC455_21703 208 4.34 Mlig455_024187

Neo: -

Age: -

 0.952 - - - - - 0.952 Mlig455_024187 {REF} {Length: 1020} {NoTransDecoderORF} {RNA1509_42051} {RNA1310_26452} {RNA815_50612}
61. MligTC455_29733 525 10.94 Mlig455_028293

Neo: -

Age: logFC(26M/2M)=1.323

 XDH 0.952 - - - - - 0.952 Mlig455_028293 {REF} {Length: 13250} {Pfam: Molybdopterin-binding domain of aldehyde dehydrogenase [PF02738.20, score=439.5]} {Human: ENSG00000158125, XDH, xanthine dehydrogenase, [Score=543, Expect=6e-180]} {Mouse: ENSMUSG00000024066, Xdh, xanthine dehydrogenase, [Score=516, Expect=1e-169]} {Dmel: FBgn0003308, ry, rosy, [Score=484, Expect=6e-158]} {Celegans: WBGene00010083, xhd-1, [Score=458, Expect=7e-148]} {RNA1509_34928, RNA1509_5759} {RNA1310_1612.1, RNA1509_34928} {RNA1509_34928, RNA815_3017}
62. MligTC455_29967 39 0.81 Mlig455_047063, Mlig455_061991

Neo: -

Age: logFC(26M/2M)=-0.424

 DDX58 0.952 - - - - - 0.952

Mlig455_047063 {REF} {Length: 1487} {Pfam: Integrase zinc binding domain [PF17921.3, score=64.5]; H2C2 zinc finger [PF09337.12, score=23.2]} {Smed: dd_Smed_v6_1574_6_72, dd_Smed_v6_1574_6_72, [Score=58.5, Expect=4e-09]} {RNA1509_56078} {RNA1310_617} {RNA815_3663}

Mlig455_061991 {REF} {Length: 5119} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=110.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=102.1]; Type III restriction enzyme, res subunit [PF04851.17, score=69.6]; Integrase zinc binding domain [PF17921.3, score=64.0]; Integrase core domain [PF00665.28, score=54.6]; DEAD/DEAH box helicase [PF00270.31, score=50.0]; Helicase conserved C-terminal domain [PF00271.33, score=47.6]; SWI2/SNF2 ATPase [PF18766.3, score=30.1]; H2C2 zinc finger [PF09337.12, score=20.1]; Integrase core domain [PF13683.8, score=18.5]} {Human: ENSG00000107201, DDX58, DExD/H-box helicase 58, [Score=168, Expect=1e-41]} {Mouse: ENSMUSG00000040296, Ddx58, DEAD (Asp-Glu-Ala-Asp) box polypeptide 58, [Score=154, Expect=5e-38]; ENSMUSG00000017830, Dhx58, DEXH (Asp-Glu-X-His) box polypeptide 58, [Score=147, Expect=8e-36]} {Dmel: FBgn0039016, Dcr-1, Dicer-1, [Score=50.8, Expect=1e-05]} {Celegans: WBGene00001090, drh-1, Dicer Related Helicase; Dicer-related helicase, [Score=112, Expect=6e-25]} {Smed: dd_Smed_v6_3742_0_1, dd_Smed_v6_3742_0_1, [Score=218, Expect=1e-57]} {RNA1509_41041, RNA1509_9178} {RNA1310_2530.1, RNA1509_41041} {RNA1509_41041, RNA815_790.1}
63. MligTC455_45449 816 16.99 Mlig455_019656, Mlig455_048058, Mlig455_048077

Neo: -

Age: -

Region-enriched R5: 1.162/0.00391

 0.952 - - - - - 0.952

Mlig455_019656 {REF} {Length: 1031} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=21.4]} {Smed: dd_Smed_v6_9938_0_1, dd_Smed_v6_9938_0_1, [Score=42.7, Expect=3e-06]} {RNA1509_37985} {RNA1310_37034.1} {RNA815_18210}

Mlig455_048058 {REF} {Length: 918} {TRANSSPLICED} {RNA1509_37985} {RNA1310_37034.1} {RNA815_18210}

Mlig455_048077 {REF} {Length: 950} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=77.4]} {Smed: dd_Smed_v6_9938_0_1, dd_Smed_v6_9938_0_1, [Score=105, Expect=9e-29]} {RNA1509_37985} {RNA1310_37034.1} {RNA815_18210}
64. MligTC455_42580 98 2.04 Mlig455_014929, Mlig455_045199

Neo: -

Age: -

 NKX2-2 0.951 - - - - - 0.951

Mlig455_014929 {REF} {Length: 1652} {Pfam: Homeodomain [PF00046.31, score=70.3]} {Human: ENSG00000125820, NKX2-2, NK2 homeobox 2, [RH, Score=138, Expect=2e-37]} {Mouse: ENSMUSG00000027434, Nkx2-2, NK2 homeobox 2, [RH, Score=139, Expect=1e-37]} {Dmel: FBgn0261930, vnd, ventral nervous system defective, [RH, Score=138, Expect=4e-35]} {Celegans: WBGene00000445, ceh-22, Homeobox protein ceh-22, [RH, Score=107, Expect=6e-26]} {Smed: dd_Smed_v6_2716_0_1, dd_Smed_v6_2716_0_1, [RH, Score=120, Expect=1e-29]} {RNA1310_42496} {RNA815_52707}

Mlig455_045199 {REF} {Length: 1211} {Pfam: Homeodomain [PF00046.31, score=71.0]} {Human: ENSG00000125820, NKX2-2, NK2 homeobox 2, [RH, Score=139, Expect=6e-39]} {Mouse: ENSMUSG00000027434, Nkx2-2, NK2 homeobox 2, [RH, Score=139, Expect=3e-39]} {Dmel: FBgn0261930, vnd, ventral nervous system defective, [RH, Score=138, Expect=1e-36]} {Celegans: WBGene00000445, ceh-22, Homeobox protein ceh-22, [RH, Score=108, Expect=2e-27]} {Smed: dd_Smed_v6_2716_0_1, dd_Smed_v6_2716_0_1, [RH, Score=120, Expect=7e-31]} {RNA1310_42496} {RNA815_52707}
65. MligTC455_07386 489 10.19 Mlig455_027368

Neo: -

Age: logFC(26M/2M)=-0.333

 DCUN1D1 0.95 - - - - - 0.950 Mlig455_027368 {REF} {Length: 1599} {Pfam: Cullin binding [PF03556.17, score=115.3]; UBA-like domain [PF14555.8, score=35.3]} {Human: ENSG00000043093, DCUN1D1, defective in cullin neddylation 1 domain containing 1, [RH, Score=202, Expect=3e-64]; ENSG00000150401, DCUN1D2, defective in cullin neddylation 1 domain containing 2, [RH, Score=201, Expect=6e-64]} {Mouse: ENSMUSG00000038506, Dcun1d2, DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae), [RH, Score=206, Expect=7e-66]; ENSMUSG00000027708, Dcun1d1, DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae), [RH, Score=200, Expect=9e-64]; ENSMUSG00000113255, Tes3-ps, testis derived transcript 3, pseudogene, [RH, Score=199, Expect=2e-63]} {Dmel: FBgn0036510, SCCRO, Squamous cell carcinoma-related oncogene, [RH, Score=209, Expect=6e-67]} {Celegans: WBGene00010428, dcn-1, Defective in cullin neddylation protein 1, [RH, Score=154, Expect=2e-45]} {Smed: dd_Smed_v6_3227_0_1, dd_Smed_v6_3227_0_1, [RH, Score=162, Expect=4e-49]} {RNA1509_29976} {RNA1310_19606.1} {RNA815_7902}
66. MligTC455_12877 194 4.05 Mlig455_003083

Neo: -

Age: -

 0.95 - - - - - 0.950 Mlig455_003083 {REF} {Length: 2223} {NoTransDecoderORF} {RNA1310_65454} {RNA815_34920}
67. MligTC455_23816 96 1.99 Mlig455_070485

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.883

 0.95 - - - - - 0.950 Mlig455_070485 {REF} {Length: 14677} {Pfam: SPW repeat [PF03779.16, score=23.4]; Molybdopterin oxidoreductase Fe4S4 domain [PF04879.18, score=22.2]} {RNA1509_3793, RNA1509_58719} {RNA1310_10854.1, RNA1509_3793, RNA1509_58719} {RNA1509_3793, RNA1509_58719, RNA815_29999}
68. MligTC455_35997 277 5.76 Mlig455_067328

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.880

 AK5 0.95 - - - - - 0.950 Mlig455_067328 {REF} {Length: 2734} {TRANSSPLICED} {Human: ENSG00000154027, AK5, adenylate kinase 5, [Score=50.8, Expect=1e-06]} {Mouse: ENSMUSG00000039058, Ak5, adenylate kinase 5, [Score=49.7, Expect=2e-06]} {RNA1509_17110} {RNA1310_19485, RNA1509_17110} {RNA1509_17110, RNA815_14117}
69. MligTC455_45213 458 9.54 Mlig455_025798

Neo: -

Age: Up-Down-Down

 PARP1 0.95 - - - - - 0.950 Mlig455_025798 {REF} {Length: 10432} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=238.2]; Ankyrin repeats (many copies) [PF13637.8, score=214.8]; Ankyrin repeat [PF00023.32, score=149.8]; Ankyrin repeats (many copies) [PF13857.8, score=145.5]; Ankyrin repeat [PF13606.8, score=141.7]; Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=77.2]; WGR domain [PF05406.17, score=66.7]; Poly(ADP-ribose) polymerase, regulatory domain [PF02877.16, score=51.9]} {Human: ENSG00000143799, PARP1, poly(ADP-ribose) polymerase 1, [Score=150, Expect=1e-35]} {Mouse: ENSMUSG00000026496, Parp1, poly (ADP-ribose) polymerase family, member 1, [Score=147, Expect=9e-35]} {Dmel: FBgn0010247, Parp, Poly-(ADP-ribose) polymerase, [Score=129, Expect=2e-29]} {Celegans: WBGene00004053, tank-1, Tankyrase-like protein, [RH, Score=188, Expect=4e-47]} {Smed: dd_Smed_v6_10338_0_1, dd_Smed_v6_10338_0_1, [Score=131, Expect=3e-30]} {RNA1509_5179, RNA1509_5717} {RNA1310_174.1, RNA1509_5179, RNA1509_5717} {RNA1509_5179, RNA1509_5717, RNA815_1091}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA