M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_15038

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_15038 250 5.21 Mlig455_063064

Neo: Int S/G2/M

Age: -

 Mlig455_063064 {REF} {Length: 2533} {TRANSSPLICED} {tRNA: Undet(NNN),pseudo, score=20.4} {Pfam: Lysine methyltransferase [PF10294.11, score=66.3]} {Mouse: ENSMUSG00000090266, Mettl23, methyltransferase like 23, [RH, Score=51.6, Expect=7e-07]} {Dmel: FBgn0038396, CG5013, [Score=50.8, Expect=9e-07]} {Smed: dd_Smed_v6_7520_0_1, dd_Smed_v6_7520_0_1, [RH, Score=67.8, Expect=8e-13]} {RNA1509_53043} {RNA1310_32954} {RNA815_28785}

Cumulative graph for MligTC455_15038

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.418 2.787 0.78785 1.00000
RegionR2 -0.898 2.787 0.22009 0.58846
RegionR3 -0.167 2.787 0.76261 1.00000
RegionR4 0.016 2.787 0.98097 1.00000
RegionR5 0.198 2.787 0.67652 1.00000
RegionR6 0.286 2.787 0.58982 1.00000
RegionR7 -0.372 2.787 0.64447 1.00000
RegionR8 1.356 2.787 0.07381 0.51943

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.55 2.787 0.39880 1.00000
RegenerationR2 0.316 2.787 0.62184 0.92381
RegenerationR3 0.064 2.787 0.91853 1.00000
RegenerationR4 0.025 2.787 0.96422 1.00000
RegenerationR5 -0.216 2.787 0.70076 0.95194
RegenerationR6 -0.823 2.787 0.20988 0.55295
RegenerationBL -1.857 2.787 0.06179 0.28883
RegenerationTP 0.1 2.787 0.89309 1.00000


Genes with expression patterns similar to MligTC455_15038

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_15038 250 5.21 Mlig455_063064

Neo: Int S/G2/M

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_063064 {REF} {Length: 2533} {TRANSSPLICED} {tRNA: Undet(NNN),pseudo, score=20.4} {Pfam: Lysine methyltransferase [PF10294.11, score=66.3]} {Mouse: ENSMUSG00000090266, Mettl23, methyltransferase like 23, [RH, Score=51.6, Expect=7e-07]} {Dmel: FBgn0038396, CG5013, [Score=50.8, Expect=9e-07]} {Smed: dd_Smed_v6_7520_0_1, dd_Smed_v6_7520_0_1, [RH, Score=67.8, Expect=8e-13]} {RNA1509_53043} {RNA1310_32954} {RNA815_28785}
2. MligTC455_27538 240 5 Mlig455_044414

Neo: -

Age: Down-Down-Up

 ANKRD44 1.759 - 0.950 - - 0.809 - Mlig455_044414 {REF} {Length: 5350} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=303.0]; Ankyrin repeats (many copies) [PF13637.8, score=217.4]; Ankyrin repeat [PF13606.8, score=159.3]; Ankyrin repeats (many copies) [PF13857.8, score=140.9]; Ankyrin repeat [PF00023.32, score=99.1]} {Human: ENSG00000065413, ANKRD44, ankyrin repeat domain 44, [Score=130, Expect=9e-30]} {Mouse: ENSMUSG00000052331, Ankrd44, ankyrin repeat domain 44, [Score=123, Expect=6e-28]} {Dmel: FBgn0016920, nompC, no mechanoreceptor potential C, [Score=107, Expect=4e-23]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=101, Expect=3e-21]} {Smed: dd_Smed_v6_13721_0_1, dd_Smed_v6_13721_0_1, [Score=131, Expect=2e-30]} {RNA1509_28032} {RNA1310_2236} {RNA815_18620}
3. MligTC455_54094 732 15.26 Mlig455_041411, Mlig455_060897

Neo: -

Age: Down-Up-Up

 MTHFR 1.726 - 0.955 - - 0.771 -

Mlig455_041411 {REF} {Length: 3348} {Pfam: Methylenetetrahydrofolate reductase [PF02219.19, score=347.8]} {Human: ENSG00000177000, MTHFR, methylenetetrahydrofolate reductase, [RH, Score=732, Expect=0.0]} {Mouse: ENSMUSG00000029009, Mthfr, methylenetetrahydrofolate reductase, [RH, Score=725, Expect=0.0]} {Dmel: FBgn0036157, CG7560, [RH, Score=93.6, Expect=3e-20]} {Celegans: WBGene00015512, mthf-1, Probable methylenetetrahydrofolate reductase, [RH, Score=609, Expect=0.0]} {Smed: dd_Smed_v6_8918_0_1, dd_Smed_v6_8918_0_1, [RH, Score=736, Expect=0.0]} {RNA1509_15714, RNA1509_4443} {RNA1310_9841, RNA1509_15714, RNA1509_4443} {RNA1509_15714, RNA1509_4443, RNA815_1838.1}

Mlig455_060897 {REF} {Length: 3252} {TRANSSPLICED} {Pfam: Methylenetetrahydrofolate reductase [PF02219.19, score=348.4]} {Human: ENSG00000177000, MTHFR, methylenetetrahydrofolate reductase, [RH, Score=734, Expect=0.0]} {Mouse: ENSMUSG00000029009, Mthfr, methylenetetrahydrofolate reductase, [RH, Score=727, Expect=0.0]} {Dmel: FBgn0036157, CG7560, [RH, Score=93.6, Expect=3e-20]} {Celegans: WBGene00015512, mthf-1, Probable methylenetetrahydrofolate reductase, [RH, Score=611, Expect=0.0]} {Smed: dd_Smed_v6_8918_0_1, dd_Smed_v6_8918_0_1, [RH, Score=738, Expect=0.0]} {RNA1509_4443} {RNA1310_9841} {RNA815_1838.1}
4. MligTC455_40619 159 3.32 Mlig455_016768

Neo: -

Age: Up-Up-Down

 KIF1A 1.724 - 0.763 - - 0.961 - Mlig455_016768 {REF} {Length: 6294} {Pfam: Kinesin protein 1B [PF12423.10, score=36.5]; FHA domain [PF00498.28, score=31.0]; Kinesin-associated [PF16183.7, score=19.9]} {Human: ENSG00000130294, KIF1A, kinesin family member 1A, [Score=87.4, Expect=4e-17]; ENSG00000054523, KIF1B, kinesin family member 1B, [Score=85.9, Expect=1e-16]} {Mouse: ENSMUSG00000087236, Kif28, kinesin family member 28, [Score=212, Expect=5e-58]} {Dmel: FBgn0267002, unc-104, uncoordinated-104, [Score=74.7, Expect=2e-13]} {Celegans: WBGene00002218, klp-6, Kinesin-like protein, [Score=236, Expect=6e-67]} {Smed: dd_Smed_v6_20223_0_1, dd_Smed_v6_20223_0_1, [Score=512, Expect=3e-172]} {RNA1509_18998} {RNA1310_3422, RNA1509_18998} {RNA1509_18998, RNA815_1532}
5. MligTC455_51870 192 4 Mlig455_004925

Neo: -

Age: logFC(26M/2M)=-0.367

 ZFYVE9 1.678 - - - - 0.958 0.720 Mlig455_004925 {REF} {Length: 2113} {Pfam: Domain of unknown function (DUF3480) [PF11979.10, score=83.2]; Atrophin-1 family [PF03154.17, score=16.9]} {Human: ENSG00000157077, ZFYVE9, zinc finger FYVE-type containing 9, [Score=129, Expect=1e-30]} {Mouse: ENSMUSG00000034557, Zfyve9, zinc finger, FYVE domain containing 9, [Score=130, Expect=1e-31]} {Dmel: FBgn0026369, Sara, Smad anchor for receptor activation, [Score=115, Expect=1e-26]} {Smed: dd_Smed_v6_8098_0_1, dd_Smed_v6_8098_0_1, [Score=88.2, Expect=4e-18]} {RNA1509_31204} {RNA1310_16232} {RNA815_22696}
6. MligTC455_32598 616 12.83 Mlig455_005315

Neo: -

Age: logFC(26M/2M)=0.585

 MAN2B1 1.677 - - - - 0.964 0.713 Mlig455_005315 {REF} {Length: 5133} {Pfam: Glycosyl hydrolases family 38 C-terminal domain [PF07748.15, score=94.0]; Glycosyl hydrolases family 38 C-terminal beta sandwich domain [PF17677.3, score=25.7]} {Human: ENSG00000104774, MAN2B1, mannosidase alpha class 2B member 1, [Score=284, Expect=2e-84]} {Mouse: ENSMUSG00000005142, Man2b1, mannosidase 2, alpha B1, [Score=268, Expect=7e-79]} {Dmel: FBgn0027611, LManII, Lysosomal alpha-mannosidase II, [Score=262, Expect=1e-76]} {Celegans: WBGene00018877, aman-1, Alpha-mannosidase, [Score=164, Expect=4e-43]} {Smed: dd_Smed_v6_1942_0_1, dd_Smed_v6_1942_0_1, [Score=248, Expect=3e-72]} {RNA1509_3414} {RNA1310_2591.1} {RNA815_805.1}
7. MligTC455_08709 35 0.72 Mlig455_057110

Neo: -

Age: -

 PCDHA13 0.983 - - - - 0.983 - Mlig455_057110 {REF} {Length: 4248} {Pfam: Cadherin domain [PF00028.19, score=213.8]; Cadherin-like [PF16184.7, score=23.5]} {Human: ENSG00000239389, PCDHA13, protocadherin alpha 13, [Score=221, Expect=6e-59]; ENSG00000102290, PCDH11X, protocadherin 11 X-linked, [Score=217, Expect=1e-56]; ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [Score=216, Expect=1e-56]} {Mouse: ENSMUSG00000034755, Pcdh11x, protocadherin 11 X-linked, [Score=214, Expect=7e-56]; ENSMUSG00000051375, Pcdh1, protocadherin 1, [Score=204, Expect=3e-53]} {Dmel: FBgn0001075, ft, fat, [Score=152, Expect=1e-36]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=107, Expect=3e-23]} {Smed: dd_Smed_v6_13040_0_1, dd_Smed_v6_13040_0_1, [Score=301, Expect=6e-86]} {RNA1509_59255} {RNA1310_30001} {RNA815_31666}
8. MligTC455_20663 552 11.51 Mlig455_031298

Neo: Neoblast, stringent

Age: -

Region-enriched R5: 1.075/0.02847

 HELLS 0.97 - - - - 0.970 - Mlig455_031298 {REF} {Length: 5758} {TRANSSPLICED} {Pfam: SNF2-related domain [PF00176.25, score=210.0]; Helicase conserved C-terminal domain [PF00271.33, score=64.4]; Type III restriction enzyme, res subunit [PF04851.17, score=24.2]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=21.7]} {Human: ENSG00000119969, HELLS, helicase, lymphoid specific, [RH, Score=598, Expect=0.0]} {Mouse: ENSMUSG00000025001, Hells, helicase, lymphoid specific, [Score=599, Expect=0.0]} {Dmel: FBgn0000212, brm, brahma, [Score=244, Expect=1e-66]} {Celegans: WBGene00004204, swsn-4, SWI/SNF nucleosome remodeling complex component; SWI2/SNF2-like protein, [Score=240, Expect=3e-65]} {Smed: dd_Smed_v6_7560_0_1, dd_Smed_v6_7560_0_1, [Score=300, Expect=2e-89]} {RNA1509_22520, RNA1509_23242} {RNA1310_5705, RNA1509_22520, RNA1509_23242} {RNA1509_22520, RNA1509_23242, RNA815_1136}
9. MligTC455_47712 80 1.66 Mlig455_044833

Neo: -

Age: -

 0.968 - - - - 0.968 - Mlig455_044833 {REF} {Length: 564} {RNA1509_55855} {RNA1310_87612} {RNA815_50831}
10. MligTC455_47864 102 2.13 Mlig455_001549

Neo: -

Age: Down-Down-Up

 0.966 - - - 0.966 - - Mlig455_001549 {REF} {Length: 1465} {RNA1509_15750} {RNA1310_27861} {RNA815_12195}
11. MligTC455_25721 60 1.26 Mlig455_004763

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.345

 SLC43A3 0.965 - - - - 0.965 - Mlig455_004763 {REF} {Length: 2625} {TRANSSPLICED} {Pfam: Sugar (and other) transporter [PF00083.26, score=18.6]} {Human: ENSG00000134802, SLC43A3, solute carrier family 43 member 3, [Score=71.6, Expect=1e-12]} {Smed: dd_Smed_v6_28076_0_1, dd_Smed_v6_28076_0_1, [Score=53.1, Expect=2e-07]} {RNA1509_12947} {RNA1310_7286.2} {RNA815_11365}
12. MligTC455_20704 143 2.98 Mlig455_053900

Neo: -

Age: Up-Up-Up, logFC(26M/2M)=0.878

Region-enriched R5: 1.814/0.00667

 HYI 0.962 - - - - 0.962 - Mlig455_053900 {REF} {Length: 1615} {TRANSSPLICED} {Pfam: Xylose isomerase-like TIM barrel [PF01261.26, score=93.1]} {Human: ENSG00000178922, HYI, hydroxypyruvate isomerase (putative), [RH, Score=147, Expect=2e-43]} {Mouse: ENSMUSG00000006395, Hyi, hydroxypyruvate isomerase (putative), [Score=129, Expect=3e-36]} {Dmel: FBgn0011770, Gip, GIP-like, [Score=127, Expect=7e-36]} {Celegans: WBGene00015483, C05D11.5, Putative hydroxypyruvate isomerase, [Score=106, Expect=8e-28]} {RNA1509_30305} {RNA1310_19033} {RNA815_22792}
13. MligTC455_46754 113 2.36 Mlig455_031199

Neo: -

Age: -

 0.962 - - - - 0.962 - Mlig455_031199 {REF} {Length: 3053} {Smed: dd_Smed_v6_18803_0_1, dd_Smed_v6_18803_0_1, [RH, Score=293, Expect=1e-92]} {RNA1509_51776, RNA1509_57274} {RNA1310_20081.2, RNA1509_57274} {RNA1509_57274, RNA815_13827}
14. MligTC455_36436 134 2.79 Mlig455_002863

Neo: Int S/G2/M

Age: -

Regeneration-enriched BL: 7.358
Regeneration-enriched R6: 6.879

 NTHL1 0.961 - - - - 0.961 - Mlig455_002863 {REF} {Length: 1664} {TRANSSPLICED} {Pfam: HhH-GPD superfamily base excision DNA repair protein [PF00730.27, score=76.0]; Helix-hairpin-helix motif [PF00633.25, score=31.0]} {Human: ENSG00000065057, NTHL1, nth like DNA glycosylase 1, [RH, Score=309, Expect=2e-104]} {Mouse: ENSMUSG00000041429, Nthl1, nth (endonuclease III)-like 1 (E.coli), [RH, Score=317, Expect=1e-107]} {Dmel: FBgn0032907, CG9272, [RH, Score=261, Expect=8e-85]} {Celegans: WBGene00011201, nth-1, Endonuclease III homolog, [RH, Score=256, Expect=6e-84]} {Smed: dd_Smed_v6_9966_0_3, dd_Smed_v6_9966_0_3, [RH, Score=294, Expect=1e-99]} {RNA1509_44555} {RNA1310_25819.1} {RNA815_11002.1}
15. MligTC455_18944 44 0.91 Mlig455_029192

Neo: -

Age: -

 WNT3A 0.958 - - - - 0.958 - Mlig455_029192 {REF} {Length: 1352} {Pfam: wnt family [PF00110.21, score=50.0]} {Human: ENSG00000154342, WNT3A, Wnt family member 3A, [Score=50.8, Expect=3e-07]} {Mouse: ENSMUSG00000029671, Wnt16, wingless-type MMTV integration site family, member 16, [Score=51.2, Expect=9e-08]; ENSMUSG00000009900, Wnt3a, wingless-type MMTV integration site family, member 3A, [Score=50.8, Expect=2e-07]} {RNA1310_39214} {RNA815_58383}
16. MligTC455_22811 174 3.63 Mlig455_057604, Mlig455_070785

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.744

 PLEC 0.957 - - - - 0.957 -

Mlig455_057604 {REF} {Length: 15474} {TRANSSPLICED} {Pfam: Plectin repeat [PF00681.22, score=632.5]; Calponin homology (CH) domain [PF00307.33, score=131.8]; OCRE domain [PF17780.3, score=47.1]; Cocaine and amphetamine regulated transcript protein (CART) [PF06373.13, score=34.7]; CAMSAP CH domain [PF11971.10, score=25.2]; Pre-PUA-like domain [PF17832.3, score=21.0]; YtxH-like protein [PF12732.9, score=19.9]} {Human: ENSG00000178209, PLEC, plectin, [Score=301, Expect=1e-80]; ENSG00000127603, MACF1, microtubule-actin crosslinking factor 1, [Score=287, Expect=4e-76]} {Mouse: ENSMUSG00000022565, Plec, plectin, [Score=288, Expect=1e-76]; ENSMUSG00000028649, Macf1, microtubule-actin crosslinking factor 1, [Score=286, Expect=6e-76]} {Dmel: FBgn0013733, shot, short stop, [Score=342, Expect=3e-93]} {Celegans: WBGene00006876, vab-10, VAB-10B protein, [Score=271, Expect=5e-72]} {Smed: dd_Smed_v6_1205_0_12, dd_Smed_v6_1205_0_12, [Score=213, Expect=4e-54]} {RNA1509_17430, RNA1509_20039, RNA1509_38834, RNA1509_7307, RNA1509_7891} {RNA1310_1207, RNA1509_17430, RNA1509_20039, RNA1509_38834, RNA1509_7891} {RNA1509_17430, RNA1509_20039, RNA1509_38834, RNA1509_7891, RNA815_972.1}

Mlig455_070785 {REF} {Length: 13675} {Pfam: Plectin repeat [PF00681.22, score=194.8]; Calponin homology (CH) domain [PF00307.33, score=57.6]; YtxH-like protein [PF12732.9, score=26.0]; Pre-PUA-like domain [PF17832.3, score=20.6]} {Human: ENSG00000178209, PLEC, plectin, [Score=147, Expect=4e-34]} {Mouse: ENSMUSG00000022565, Plec, plectin, [Score=145, Expect=2e-33]} {Dmel: FBgn0013733, shot, short stop, [Score=175, Expect=9e-43]} {Celegans: WBGene00006876, vab-10, VAB-10B protein, [Score=139, Expect=4e-32]} {Smed: dd_Smed_v6_1205_0_16, dd_Smed_v6_1205_0_16, [Score=120, Expect=1e-26]} {RNA1509_53030} {RNA1310_1207} {RNA815_972.1}
17. MligTC455_50327 520 10.84 Mlig455_051001

Neo: -

Age: Up-Down-Down

 CHD1 0.957 - - - - 0.957 - Mlig455_051001 {REF} {Length: 7644} {TRANSSPLICED} {Pfam: SNF2-related domain [PF00176.25, score=221.7]; Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=83.3]; Helicase conserved C-terminal domain [PF00271.33, score=64.3]; Domain of unknown function (DUF4208) [PF13907.8, score=63.4]; CDH1/2 SANT-Helical linker 1 [PF18375.3, score=60.8]; Family of unknown function (DUF6511) [PF20121.1, score=28.6]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=19.9]} {Human: ENSG00000153922, CHD1, chromodomain helicase DNA binding protein 1, [RH, Score=1174, Expect=0.0]} {Mouse: ENSMUSG00000023852, Chd1, chromodomain helicase DNA binding protein 1, [RH, Score=1182, Expect=0.0]} {Dmel: FBgn0250786, Chd1, Chromodomain-helicase-DNA-binding protein 1, [RH, Score=1014, Expect=0.0]} {Celegans: WBGene00010369, chd-1, Chromodomain and Helicase Domain protein, [RH, Score=991, Expect=0.0]} {Smed: dd_Smed_v6_2597_0_1, dd_Smed_v6_2597_0_1, [RH, Score=1085, Expect=0.0]} {RNA1509_9423} {RNA1310_479.1, RNA1509_9423} {RNA1509_9423, RNA815_1835}
18. MligTC455_02117 19 0.4 Mlig455_065174

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_065174 {REF} {Length: 1623}
19. MligTC455_41754 607 12.65 Mlig455_015696

Neo: -

Age: logFC(26M/2M)=0.671

 RBBP5 0.956 - - - - 0.956 - Mlig455_015696 {REF} {Length: 1966} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=51.9]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=36.0]} {Human: ENSG00000117222, RBBP5, RB binding protein 5, histone lysine methyltransferase complex subunit, [RH, Score=558, Expect=0.0]} {Mouse: ENSMUSG00000026439, Rbbp5, retinoblastoma binding protein 5, histone lysine methyltransferase complex subunit, [RH, Score=558, Expect=0.0]} {Dmel: FBgn0036973, Rbbp5, Retinoblastoma binding protein 5, [RH, Score=562, Expect=0.0]} {Celegans: WBGene00017683, rbbp-5, Retinoblastoma-binding protein homolog 5, [RH, Score=300, Expect=3e-96]} {Smed: dd_Smed_v6_4897_0_1, dd_Smed_v6_4897_0_1, [RH, Score=525, Expect=0.0]} {RNA1509_24461} {RNA1310_14133} {RNA815_5169}
20. MligTC455_12919 24 0.5 Mlig455_012237

Neo: -

Age: -

Region-enriched R4: 8.303/0.00009

 0.955 - - - - 0.955 - Mlig455_012237 {REF} {Length: 1410} {TRANSSPLICED} {RNA1310_38823} {RNA815_30372}
21. MligTC455_18230 106 2.2 Mlig455_018499

Neo: -

Age: Down-Up-Up

 FDXR 0.955 - 0.955 - - - - Mlig455_018499 {REF} {Length: 2353} {TRANSSPLICED} {Pfam: Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=38.7]} {Human: ENSG00000161513, FDXR, ferredoxin reductase, [RH, Score=379, Expect=2e-126]} {Mouse: ENSMUSG00000018861, Fdxr, ferredoxin reductase, [RH, Score=359, Expect=5e-119]} {Dmel: FBgn0015582, dare, defective in the avoidance of repellents, [RH, Score=331, Expect=1e-108]} {Celegans: WBGene00013376, Y62E10A.6, NADPH:adrenodoxin oxidoreductase, mitochondrial, [RH, Score=242, Expect=2e-74]} {Smed: dd_Smed_v6_8668_0_12, dd_Smed_v6_8668_0_12, [RH, Score=369, Expect=8e-124]} {RNA1509_20793} {RNA1310_17259} {RNA815_16283}
22. MligTC455_39927 462 9.62 Mlig455_003440, Mlig455_030666

Neo: -

Age: -

Region-enriched R5: 1.172/0.01173

 0.955 - 0.955 - - - -

Mlig455_003440 {REF} {Length: 3294} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=22.7]} {RNA1509_51800} {RNA1310_33993} {RNA815_19951}

Mlig455_030666 {REF} {Length: 3777} {Pfam: Mitochondrial carrier protein [PF00153.29, score=22.1]} {RNA1509_51800} {RNA1310_33993, RNA1509_51800} {RNA1509_51800, RNA815_19951}
23. MligTC455_44322 200 4.16 Mlig455_053564

Neo: Int S/G2/M

Age: -

 UPF3A 0.955 - - - - 0.955 - Mlig455_053564 {REF} {Length: 2533} {Pfam: Smg-4/UPF3 family [PF03467.17, score=132.6]} {Human: ENSG00000169062, UPF3A, UPF3A, regulator of nonsense mediated mRNA decay, [RH, Score=106, Expect=2e-24]; ENSG00000125351, UPF3B, UPF3B, regulator of nonsense mediated mRNA decay, [RH, Score=106, Expect=3e-24]} {Mouse: ENSMUSG00000036572, Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), [RH, Score=107, Expect=6e-25]} {Dmel: FBgn0034923, Upf3, [RH, Score=114, Expect=3e-27]} {Celegans: WBGene00004882, smg-4, Suppressor with Morphological effect on Genitalia, [RH, Score=73.9, Expect=3e-14]} {RNA1509_14867} {RNA1310_17638} {RNA815_32496}
24. MligTC455_28640 1584 33 Mlig455_048248

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.826

 RNF213 0.954 - - - - 0.954 - Mlig455_048248 {REF} {Length: 17851} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=28.3]; AAA domain (dynein-related subfamily) [PF07728.16, score=20.8]; P-loop containing dynein motor region [PF12775.9, score=20.5]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=19.3]} {Human: ENSG00000173821, RNF213, ring finger protein 213, [Score=1192, Expect=0.0]} {Mouse: ENSMUSG00000070327, Rnf213, ring finger protein 213, [Score=1167, Expect=0.0]} {RNA1509_1262, RNA1509_30585, RNA1509_34013, RNA1509_42379, RNA1509_5517, RNA1509_56737} {RNA1310_22, RNA1509_1262, RNA1509_30585, RNA1509_34013, RNA1509_42379, RNA1509_5517, RNA1509_56737} {RNA1509_1262, RNA1509_30585, RNA1509_34013, RNA1509_42379, RNA1509_5517, RNA1509_56737, RNA815_15}
25. MligTC455_35108 66 1.37 Mlig455_068172

Neo: -

Age: Down-Up-Up

 0.952 - - - - 0.952 - Mlig455_068172 {REF} {Length: 4389} {RNA1509_2515} {RNA1310_28603.1} {RNA815_3258.1}
26. MligTC455_17842 957 19.93 Mlig455_070916

Neo: -

Age: -

 NARS 0.951 - - - - 0.951 - Mlig455_070916 {REF} {Length: 2687} {TRANSSPLICED} {Pfam: tRNA synthetases class II (D, K and N) [PF00152.22, score=332.3]; OB-fold nucleic acid binding domain [PF01336.27, score=43.3]} {Human: ENSG00000134440, NARS, asparaginyl-tRNA synthetase, [RH, Score=737, Expect=0.0]} {Mouse: ENSMUSG00000024587, Nars, asparaginyl-tRNA synthetase, [RH, Score=723, Expect=0.0]} {Dmel: FBgn0086443, AsnRS, Asparaginyl-tRNA synthetase, [RH, Score=718, Expect=0.0]} {Celegans: WBGene00003815, nars-1, Asparagine--tRNA ligase, cytoplasmic, [RH, Score=623, Expect=0.0]} {Smed: dd_Smed_v6_2691_0_1, dd_Smed_v6_2691_0_1, [RH, Score=587, Expect=0.0]} {RNA1509_5093} {RNA1310_14490, RNA1509_5093} {RNA1509_5093, RNA815_5353}
27. MligTC455_23795 429 8.94 Mlig455_001192

Neo: -

Age: Up-Down-Up

 0.951 - - - - 0.951 - Mlig455_001192 {REF} {Length: 607} {NoTransDecoderORF} {RNA1509_41106} {RNA1310_59119} {RNA815_35957}
28. MligTC455_29682 45 0.93 Mlig455_007255

Neo: -

Age: -

Region-enriched R2: 5.343/0.00895

 0.951 - - - - 0.951 - Mlig455_007255 {REF} {Length: 1636} {NoTransDecoderORF} {RNA1509_16956} {RNA1310_77083} {RNA815_33530}
29. MligTC455_49119 871 18.16 Mlig455_035851

Neo: Int S/G2/M

Age: -

 CWF19L2 0.951 - - - - 0.951 - Mlig455_035851 {REF} {Length: 2743} {TRANSSPLICED} {Pfam: Protein similar to CwfJ C-terminus 2 [PF04676.16, score=72.4]; Protein similar to CwfJ C-terminus 1 [PF04677.17, score=57.9]} {Human: ENSG00000152404, CWF19L2, CWF19 like cell cycle control factor 2, [RH, Score=208, Expect=1e-55]} {Mouse: ENSMUSG00000025898, Cwf19l2, CWF19-like 2, cell cycle control (S. pombe), [RH, Score=213, Expect=2e-57]} {Dmel: FBgn0030655, CG9213, [RH, Score=191, Expect=5e-51]} {Celegans: WBGene00015156, B0361.2, CWF19-like protein 2 homolog, [RH, Score=153, Expect=1e-39]} {Smed: dd_Smed_v6_8932_0_1, dd_Smed_v6_8932_0_1, [RH, Score=185, Expect=7e-50]} {RNA1509_9949} {RNA1310_6933} {RNA815_19127}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA