TomoSeq data search

Data search

Results for MligTC455_47732

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_47732	129	2.68	Mlig455_025199, Mlig455_025658	Neo: - Age: -	RAC1	Mlig455_025199 {REF} {Length: 1151} {Pfam: Ras family [PF00071.24, score=22.5]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=59.3, Expect=2e-11]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=56.6, Expect=1e-10]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=59.3, Expect=2e-11]} {Dmel: FBgn0010333, Rac1, [Score=58.9, Expect=2e-11]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=57.8, Expect=4e-11]} {Smed: dd_Smed_v6_913_0_1, dd_Smed_v6_913_0_1, [Score=66.2, Expect=2e-14]} {RNA1509_55963} {RNA1310_40048} {RNA815_24639} Mlig455_025658 {REF} {Length: 1673} {Pfam: Ras family [PF00071.24, score=161.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=74.6]; ADP-ribosylation factor family [PF00025.23, score=26.3]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=206, Expect=6e-68]; ENSG00000177105, RHOG, ras homolog family member G, [Score=201, Expect=7e-66]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=197, Expect=2e-64]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=197, Expect=3e-64]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=206, Expect=4e-68]; ENSMUSG00000073982, Rhog, ras homolog family member G, [Score=201, Expect=5e-66]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=197, Expect=2e-64]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=196, Expect=4e-64]} {Dmel: FBgn0010333, Rac1, [Score=202, Expect=1e-66]} {Celegans: WBGene00003239, mig-2, Rac-like GTPase, [Score=204, Expect=2e-67]} {Smed: dd_Smed_v6_913_0_1, dd_Smed_v6_913_0_1, [Score=205, Expect=9e-68]} {RNA1509_55963} {RNA1310_40048, RNA1509_55963} {RNA1509_55963, RNA815_24639}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_47732

129

2.68

Mlig455_025199, Mlig455_025658

Neo: -

Age: -

RAC1

Mlig455_025199 {REF} {Length: 1151} {Pfam: Ras family [PF00071.24, score=22.5]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=59.3, Expect=2e-11]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=56.6, Expect=1e-10]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=59.3, Expect=2e-11]} {Dmel: FBgn0010333, Rac1, [Score=58.9, Expect=2e-11]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=57.8, Expect=4e-11]} {Smed: dd_Smed_v6_913_0_1, dd_Smed_v6_913_0_1, [Score=66.2, Expect=2e-14]} {RNA1509_55963} {RNA1310_40048} {RNA815_24639}

Mlig455_025658 {REF} {Length: 1673} {Pfam: Ras family [PF00071.24, score=161.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=74.6]; ADP-ribosylation factor family [PF00025.23, score=26.3]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=206, Expect=6e-68]; ENSG00000177105, RHOG, ras homolog family member G, [Score=201, Expect=7e-66]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=197, Expect=2e-64]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=197, Expect=3e-64]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=206, Expect=4e-68]; ENSMUSG00000073982, Rhog, ras homolog family member G, [Score=201, Expect=5e-66]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=197, Expect=2e-64]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=196, Expect=4e-64]} {Dmel: FBgn0010333, Rac1, [Score=202, Expect=1e-66]} {Celegans: WBGene00003239, mig-2, Rac-like GTPase, [Score=204, Expect=2e-67]} {Smed: dd_Smed_v6_913_0_1, dd_Smed_v6_913_0_1, [Score=205, Expect=9e-68]} {RNA1509_55963} {RNA1310_40048, RNA1509_55963} {RNA1509_55963, RNA815_24639}

Cumulative graph for MligTC455_47732

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-6.214	2.046	0.14374	0.75506
RegionR2	2.191	2.046	0.04599	0.25326
RegionR3	-0.056	2.046	0.87344	1.00000
RegionR4	-1.241	2.046	0.99338	1.00000
RegionR5	-0.827	2.046	0.98108	1.00000
RegionR6	1.047	2.046	0.29529	0.88669
RegionR7	2.603	2.046	0.00426	0.09819
RegionR8	2.497	2.046	0.02679	0.31955

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	2.112	2.046	0.99980	1.00000
RegenerationR2	-0.623	2.046	0.43873	0.83943
RegenerationR3	1.669	2.046	0.07081	0.44561
RegenerationR4	0.499	2.046	0.59724	0.91231
RegenerationR5	0.253	2.046	0.78106	0.98210
RegenerationR6	-0.116	2.046	0.91945	1.00000
RegenerationBL	-0.026	2.046	0.99663	1.00000
RegenerationTP	-2.98	2.046	0.02869	0.28467

Genes with expression patterns similar to MligTC455_47732

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_47732	129	2.68	Mlig455_025199, Mlig455_025658	Neo: - Age: -	RAC1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_025199 {REF} {Length: 1151} {Pfam: Ras family [PF00071.24, score=22.5]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=59.3, Expect=2e-11]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=56.6, Expect=1e-10]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=59.3, Expect=2e-11]} {Dmel: FBgn0010333, Rac1, [Score=58.9, Expect=2e-11]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=57.8, Expect=4e-11]} {Smed: dd_Smed_v6_913_0_1, dd_Smed_v6_913_0_1, [Score=66.2, Expect=2e-14]} {RNA1509_55963} {RNA1310_40048} {RNA815_24639} Mlig455_025658 {REF} {Length: 1673} {Pfam: Ras family [PF00071.24, score=161.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=74.6]; ADP-ribosylation factor family [PF00025.23, score=26.3]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=206, Expect=6e-68]; ENSG00000177105, RHOG, ras homolog family member G, [Score=201, Expect=7e-66]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=197, Expect=2e-64]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=197, Expect=3e-64]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=206, Expect=4e-68]; ENSMUSG00000073982, Rhog, ras homolog family member G, [Score=201, Expect=5e-66]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=197, Expect=2e-64]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=196, Expect=4e-64]} {Dmel: FBgn0010333, Rac1, [Score=202, Expect=1e-66]} {Celegans: WBGene00003239, mig-2, Rac-like GTPase, [Score=204, Expect=2e-67]} {Smed: dd_Smed_v6_913_0_1, dd_Smed_v6_913_0_1, [Score=205, Expect=9e-68]} {RNA1509_55963} {RNA1310_40048, RNA1509_55963} {RNA1509_55963, RNA815_24639}
2.	MligTC455_38350	86	1.78	Mlig455_039927	Neo: - Age: -		1.76	-	-	0.794	-	0.966	-	Mlig455_039927 {REF} {Length: 3262} {RNA1509_17147} {RNA1310_17243} {RNA815_34486}
3.	MligTC455_15425	20	0.41	Mlig455_005371	Neo: - Age: -		0.975	-	-	0.975	-	-	-	Mlig455_005371 {REF} {Length: 1504} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=22.5]} {RNA1509_54681} {RNA1310_18763} {RNA815_17502}
4.	MligTC455_51020	106	2.2	Mlig455_017827	Neo: - Age: -		0.956	-	-	0.956	-	-	-	Mlig455_017827 {REF} {Length: 2829} {RNA1509_46951} {RNA1310_31396} {RNA815_47704}
5.	MligTC455_28061	364	7.58	Mlig455_045727, Mlig455_045735	Neo: - Age: -	TRPM7	0.953	-	-	0.953	-	-	-	Mlig455_045727 {REF} {Length: 2287} {TRANSSPLICED} {Pfam: Apg6 coiled-coil region [PF17675.3, score=22.0]} {RNA1509_21252} {RNA1310_16384, RNA1509_21252} {RNA1509_21252, RNA815_11261} Mlig455_045735 {REF} {Length: 2075} {TRANSSPLICED} {Pfam: SLOG in TRPM [PF18139.3, score=111.8]; SLOG in TRPM, prokaryote [PF18171.3, score=23.5]} {Human: ENSG00000092439, TRPM7, transient receptor potential cation channel subfamily M member 7, [Score=168, Expect=5e-45]; ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=163, Expect=3e-43]} {Mouse: ENSMUSG00000027365, Trpm7, transient receptor potential cation channel, subfamily M, member 7, [Score=168, Expect=4e-45]; ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=163, Expect=2e-43]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=165, Expect=4e-44]} {Celegans: WBGene00001796, gtl-2, Gon-Two Like (TRP subfamily), [Score=139, Expect=2e-35]} {Smed: dd_Smed_v6_11377_0_1, dd_Smed_v6_11377_0_1, [Score=135, Expect=3e-34]} {RNA1509_21252} {RNA1310_16384} {RNA815_2587}
6.	MligTC455_35146	79	1.65	Mlig455_041956	Neo: - Age: -	CAPN8	0.95	-	-	0.950	-	-	-	Mlig455_041956 {REF} {Length: 5164} {Pfam: Calpain family cysteine protease [PF00648.23, score=313.1]; Calpain large subunit, domain III [PF01067.24, score=120.5]; EF-hand domain pair [PF13499.8, score=24.7]; EF hand [PF00036.34, score=20.7]; EF-hand domain [PF13405.8, score=20.4]} {Human: ENSG00000203697, CAPN8, calpain 8, [Score=469, Expect=7e-156]; ENSG00000135773, CAPN9, calpain 9, [Score=451, Expect=8e-149]; ENSG00000092529, CAPN3, calpain 3, [Score=451, Expect=3e-148]} {Mouse: ENSMUSG00000038599, Capn8, calpain 8, [Score=460, Expect=2e-152]; ENSMUSG00000079110, Capn3, calpain 3, [Score=451, Expect=2e-148]; ENSMUSG00000031981, Capn9, calpain 9, [Score=450, Expect=1e-148]} {Dmel: FBgn0025866, CalpB, Calpain-B, [Score=476, Expect=3e-156]} {Celegans: WBGene00000542, clp-1, Calpain clp-1, [Score=358, Expect=7e-113]} {Smed: dd_Smed_v6_1971_0_2, dd_Smed_v6_1971_0_2, [Score=586, Expect=0.0]} {RNA1509_47386} {RNA1310_7426} {RNA815_43538}