TomoSeq data search

Data search

Results for MligTC455_15611

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_15611

451

9.39

Mlig455_060587, Mlig455_060628

Neo: -

Age: -

Regeneration-downregulated BL: -7.473

Regeneration-depleted BL: -7.473

Mlig455_060587 {REF} {Length: 2766} {Pfam: Protein of unknown function (DUF3847) [PF12958.9, score=27.6]} {RNA1509_45592} {RNA1310_33388} {RNA815_14613}

Mlig455_060628 {REF} {Length: 1029} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_59624} {RNA1310_33388} {RNA815_14613}

Cumulative graph for MligTC455_15611

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.07	3.681	0.17727	0.80459
RegionR2	0.299	3.681	0.60075	0.95108
RegionR3	0.301	3.681	0.52997	1.00000
RegionR4	0.233	3.681	0.67244	0.96847
RegionR5	0.117	3.681	0.79958	1.00000
RegionR6	0.978	3.681	0.03473	0.34642
RegionR7	0.871	3.681	0.10632	0.61946
RegionR8	-0.729	3.681	0.36710	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-5.301	3.681	0.35226	1.00000
RegenerationR2	-0.575	3.681	0.23774	0.68591
RegenerationR3	0.371	3.681	0.47830	0.84872
RegenerationR4	-0.499	3.681	0.35616	0.78533
RegenerationR5	-0.307	3.681	0.55604	0.88891
RegenerationR6	-1.434	3.681	0.00789	0.10880
RegenerationBL	-7.473	3.681	0.00000	0.00047	Specific for BL: -7.473
RegenerationTP	0.471	3.681	0.45755	0.87269

Genes with expression patterns similar to MligTC455_15611

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_15611	451	9.39	Mlig455_060587, Mlig455_060628	Neo: - Age: - Regeneration-downregulated BL: -7.473 Regeneration-depleted BL: -7.473		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_060587 {REF} {Length: 2766} {Pfam: Protein of unknown function (DUF3847) [PF12958.9, score=27.6]} {RNA1509_45592} {RNA1310_33388} {RNA815_14613} Mlig455_060628 {REF} {Length: 1029} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_59624} {RNA1310_33388} {RNA815_14613}
2.	MligTC455_15610	221	4.6	Mlig455_053951	Neo: - Age: logFC(26M/2M)=0.556	GOLT1A	5.984	0.997	0.999	0.998	0.998	0.996	0.996	Mlig455_053951 {REF} {Length: 1127} {Pfam: Got1/Sft2-like family [PF04178.14, score=58.1]} {Human: ENSG00000174567, GOLT1A, golgi transport 1A, [RH, Score=119, Expect=3e-35]} {Mouse: ENSMUSG00000103421, Golt1a, golgi transport 1A, [RH, Score=125, Expect=1e-37]; ENSMUSG00000098306, Gm28040, predicted gene, 28040, [RH, Score=125, Expect=1e-37]} {Dmel: FBgn0052576, CG32576, [RH, Score=132, Expect=2e-40]} {Celegans: WBGene00018270, F41C3.4, Probable Golgi transport protein 1, [RH, Score=114, Expect=2e-33]} {Smed: dd_Smed_v6_5105_0_1, dd_Smed_v6_5105_0_1, [RH, Score=139, Expect=2e-43]} {RNA1509_27476} {RNA1310_33388} {RNA815_14613}
3.	MligTC455_07850	131	2.73	Mlig455_040737	Neo: - Age: -		1.748	0.798	-	-	-	-	0.950	Mlig455_040737 {REF} {Length: 474} {NoTransDecoderORF} {RNA815_44906}
4.	MligTC455_49858	411	8.56	Mlig455_037429	Neo: - Age: -	CDC42	1.699	0.732	-	-	-	-	0.967	Mlig455_037429 {REF} {Length: 2600} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=183.8]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=67.9]; ADP-ribosylation factor family [PF00025.23, score=27.0]} {Human: ENSG00000070831, CDC42, cell division cycle 42, [RH, Score=337, Expect=2e-119]; ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [RH, Score=337, Expect=2e-119]} {Mouse: ENSMUSG00000006699, Cdc42, cell division cycle 42, [RH, Score=337, Expect=1e-119]} {Dmel: FBgn0010341, Cdc42, [RH, Score=335, Expect=4e-119]} {Celegans: WBGene00000390, cdc-42, Cell division control protein 42 homolog, [RH, Score=328, Expect=2e-116]} {Smed: dd_Smed_v6_698_0_1, dd_Smed_v6_698_0_1, [RH, Score=330, Expect=5e-117]} {RNA1509_55232} {RNA1310_42394} {RNA815_18622}
5.	MligTC455_41173	89	1.85	Mlig455_012423	Neo: - Age: -		0.973	-	-	-	-	-	0.973	Mlig455_012423 {REF} {Length: 2142} {Pfam: Transcription factor IIA, alpha/beta subunit [PF03153.15, score=22.2]} {RNA1509_43208} {RNA1310_19732} {RNA815_10956}
6.	MligTC455_46822	605	12.61	Mlig455_034621	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.538		0.971	-	-	-	-	-	0.971	Mlig455_034621 {REF} {Length: 4106} {TRANSSPLICED} {RNA1509_53831} {RNA1310_22633.1} {RNA815_28333}
7.	MligTC455_29510	1443	30.06	Mlig455_003367, Mlig455_003369	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.360 Region-enriched R8: 1.897/0.00063 Region-enriched R7: 1.375/0.01086 Regeneration-downregulated BL: -2.492 Regeneration-depleted BL: -2.492		0.97	-	-	-	-	-	0.970	Mlig455_003367 {REF} {Length: 1906} {Pfam: Interferon-induced 6-16 family [PF06140.15, score=25.4]} {RNA1509_46297} {RNA1310_31671} {RNA815_28401} Mlig455_003369 {REF} {Length: 1024} {RNA1509_28087, RNA1509_46297} {RNA1310_31671, RNA1509_28087, RNA1509_46297} {RNA1509_28087, RNA1509_46297, RNA815_17641.1}
8.	MligTC455_42212	384	7.99	Mlig455_066820	Neo: - Age: Down-Up-Down		0.968	-	-	-	-	-	0.968	Mlig455_066820 {REF} {Length: 865} {Pfam: Protein of unknown function (DUF3421) [PF11901.10, score=120.7]} {Dmel: FBgn0034583, CG10527, [Score=94.0, Expect=4e-23]} {Smed: dd_Smed_v6_766_0_1, dd_Smed_v6_766_0_1, [Score=127, Expect=1e-37]} {RNA1509_43893} {RNA1310_49421} {RNA815_24671}
9.	MligTC455_23908	319	6.64	Mlig455_035672, Mlig455_035768	Neo: - Age: - Region-enriched R8: 3.529/0.00166	SDCBP	0.965	-	-	-	-	-	0.965	Mlig455_035672 {REF} {Length: 2598} {Pfam: PDZ domain [PF00595.26, score=78.0]; PDZ domain [PF17820.3, score=57.4]; PDZ domain [PF13180.8, score=42.0]} {Human: ENSG00000137575, SDCBP, syndecan binding protein, [Score=57.0, Expect=2e-08]} {Mouse: ENSMUSG00000030838, Ush1c, USH1 protein network component harmonin, [Score=59.3, Expect=8e-09]; ENSMUSG00000028249, Sdcbp, syndecan binding protein, [Score=58.2, Expect=2e-09]} {Dmel: FBgn0029835, CG5921, [Score=67.4, Expect=2e-11]} {Smed: dd_Smed_v6_11951_0_1, dd_Smed_v6_11951_0_1, [RH, Score=188, Expect=2e-54]} {RNA1509_47757} {RNA1310_7845.1} {RNA815_33452} Mlig455_035768 {REF} {Length: 2416} {Pfam: PDZ domain [PF00595.26, score=75.7]; PDZ domain [PF17820.3, score=57.2]; PDZ domain [PF13180.8, score=43.7]} {Human: ENSG00000137575, SDCBP, syndecan binding protein, [Score=56.2, Expect=5e-08]} {Mouse: ENSMUSG00000030838, Ush1c, USH1 protein network component harmonin, [Score=62.0, Expect=1e-09]} {Dmel: FBgn0029835, CG5921, [Score=64.7, Expect=1e-10]} {Smed: dd_Smed_v6_11951_0_1, dd_Smed_v6_11951_0_1, [RH, Score=188, Expect=6e-54]} {RNA1509_47757} {RNA1310_7845.1} {RNA815_33452}
10.	MligTC455_30998	353	7.36	Mlig455_041372, Mlig455_062743	Neo: - Age: -		0.961	-	-	-	-	-	0.961	Mlig455_041372 {REF} {Length: 239} {NoTransDecoderORF} {RNA1509_13580} {RNA1310_166} {RNA815_5586} Mlig455_062743 {REF} {Length: 223} {NoTransDecoderORF} {RNA1509_13580} {RNA1310_166} {RNA815_5586}
11.	MligTC455_52093	200	4.17	Mlig455_026940, Mlig455_027028, Mlig455_027091	Neo: - Age: -		0.961	-	-	-	-	-	0.961	Mlig455_026940 {REF} {Length: 2010} {RNA1310_29141} {RNA815_58200} Mlig455_027028 {REF} {Length: 1107} {NoTransDecoderORF} {RNA1310_29141} {RNA815_58200} Mlig455_027091 {REF} {Length: 1224} {RNA1310_29141} {RNA815_58200}
12.	MligTC455_30589	76	1.58	Mlig455_014800, Mlig455_042626	Neo: - Age: Up-Down-Up		0.96	-	-	-	-	-	0.960	Mlig455_014800 {REF} {Length: 4522} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=132.9]} {Celegans: WBGene00007723, C25F9.2, [Score=290, Expect=2e-84]} {RNA1509_4648} {RNA1310_3417} {RNA815_2072} Mlig455_042626 {REF} {Length: 4176} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=141.2]} {Celegans: WBGene00007723, C25F9.2, [Score=291, Expect=7e-85]} {RNA1509_4648} {RNA1310_2280.1} {RNA815_694.2}
13.	MligTC455_54214	320	6.67	Mlig455_046794, Mlig455_069948	Neo: - Age: Down-Up-Down		0.96	-	-	-	-	-	0.960	Mlig455_046794 {REF} {Length: 3639} {TRANSSPLICED} {RNA1509_54074} {RNA1310_29489, RNA1509_54074} {RNA1509_54074, RNA815_22674} Mlig455_069948 {REF} {Length: 3566} {TRANSSPLICED} {RNA1509_54074} {RNA1310_29489} {RNA815_22674}
14.	MligTC455_41212	267	5.57	Mlig455_058990	Neo: - Age: - Region-enriched R7: 3.930/0.00000		0.956	-	-	-	-	-	0.956	Mlig455_058990 {REF} {Length: 864} {NoTransDecoderORF} {RNA1509_28368} {RNA1310_8590.1} {RNA815_19858}
15.	MligTC455_14190	26	0.54	Mlig455_007887	Neo: - Age: -		0.953	-	-	-	-	-	0.953	Mlig455_007887 {REF} {Length: 570} {NoTransDecoderORF}
16.	MligTC455_25642	404	8.41	Mlig455_055674	Neo: - Age: logFC(26M/2M)=-0.267 Regeneration-downregulated BL: -3.906 Regeneration-depleted BL: -3.906	TRAF3	0.951	-	-	-	-	-	0.951	Mlig455_055674 {REF} {Length: 3425} {Pfam: TRAF-type zinc finger [PF02176.20, score=35.2]; Seven in absentia protein family [PF03145.18, score=32.2]} {Human: ENSG00000131323, TRAF3, TNF receptor associated factor 3, [Score=68.9, Expect=2e-11]} {Mouse: ENSMUSG00000021277, Traf3, TNF receptor-associated factor 3, [Score=75.5, Expect=1e-13]; ENSMUSG00000027164, Traf6, TNF receptor-associated factor 6, [Score=72.0, Expect=1e-12]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [Score=58.5, Expect=1e-08]} {Smed: dd_Smed_v6_8046_0_1, dd_Smed_v6_8046_0_1, [Score=79.0, Expect=4e-15]} {RNA1509_45640} {RNA1310_11522} {RNA815_6004}
17.	MligTC455_27901	200	4.17	Mlig455_028860	Neo: - Age: -	RNF213	0.951	-	-	-	-	-	0.951	Mlig455_028860 {REF} {Length: 7501} {Human: ENSG00000173821, RNF213, ring finger protein 213, [Score=81.6, Expect=2e-15]} {Mouse: ENSMUSG00000070327, Rnf213, ring finger protein 213, [Score=72.8, Expect=7e-13]} {RNA1509_4697} {RNA1310_300.1} {RNA815_205.1}
18.	MligTC455_13293	364	7.59	Mlig455_012562	Neo: - Age: Down-Up-Down	FYN	0.95	-	-	-	-	-	0.950	Mlig455_012562 {REF} {Length: 2323} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=272.2]; Protein kinase domain [PF00069.27, score=145.0]; SH2 domain [PF00017.26, score=47.5]; SH3 domain [PF00018.30, score=43.5]; Variant SH3 domain [PF07653.19, score=29.7]; Variant SH3 domain [PF14604.8, score=29.4]; Haspin like kinase domain [PF12330.10, score=21.4]; ABC1 atypical kinase-like domain [PF03109.18, score=18.6]} {Human: ENSG00000010810, FYN, FYN proto-oncogene, Src family tyrosine kinase, [Score=366, Expect=8e-121]; ENSG00000182866, LCK, LCK proto-oncogene, Src family tyrosine kinase, [Score=364, Expect=1e-120]; ENSG00000101336, HCK, HCK proto-oncogene, Src family tyrosine kinase, [Score=357, Expect=5e-118]; ENSG00000176105, YES1, YES proto-oncogene 1, Src family tyrosine kinase, [Score=357, Expect=2e-117]; ENSG00000197122, SRC, SRC proto-oncogene, non-receptor tyrosine kinase, [Score=352, Expect=2e-115]} {Mouse: ENSMUSG00000019843, Fyn, Fyn proto-oncogene, [Score=369, Expect=3e-122]; ENSMUSG00000000409, Lck, lymphocyte protein tyrosine kinase, [Score=365, Expect=6e-121]; ENSMUSG00000014932, Yes1, YES proto-oncogene 1, Src family tyrosine kinase, [Score=357, Expect=2e-117]; ENSMUSG00000027646, Src, Rous sarcoma oncogene, [Score=352, Expect=1e-115]} {Dmel: FBgn0264959, Src42A, Src oncogene at 42A, [Score=361, Expect=1e-119]} {Celegans: WBGene00005077, src-1, Tyrosine protein-kinase src-1, [Score=379, Expect=4e-127]} {Smed: dd_Smed_v6_3363_0_2, dd_Smed_v6_3363_0_2, [Score=431, Expect=1e-147]} {RNA1509_28839} {RNA1310_8178.1} {RNA815_4079.1}
19.	MligTC455_39861	264	5.5	Mlig455_059014	Neo: - Age: -		0.95	-	-	-	-	-	0.950	Mlig455_059014 {REF} {Length: 2813} {TRANSSPLICED} {RNA1509_22951} {RNA1310_7946} {RNA815_4282}

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