TomoSeq data search

Data search

Results for MligTC455_15622

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_15622

731

15.22

Mlig455_013217, Mlig455_013312

Neo: -

Age: -

Region-enriched R5: 1.933/0.00483

TRAPPC11

Mlig455_013217 {REF} {Length: 4928} {TRANSSPLICED} {Pfam: Foie gras liver health family 1 [PF11817.10, score=168.6]; Gryzun, putative Golgi trafficking [PF12742.9, score=42.9]; Gryzun, putative trafficking through Golgi [PF07919.14, score=42.3]} {Human: ENSG00000168538, TRAPPC11, trafficking protein particle complex 11, [RH, Score=769, Expect=0.0]} {Mouse: ENSMUSG00000038102, Trappc11, trafficking protein particle complex 11, [RH, Score=777, Expect=0.0]} {Dmel: FBgn0035416, gry, gryzun, [RH, Score=402, Expect=2e-119]} {Celegans: WBGene00015173, trpp-11, TRansport Protein Particle, [RH, Score=214, Expect=1e-56]} {Smed: dd_Smed_v6_4563_0_4, dd_Smed_v6_4563_0_4, [RH, Score=681, Expect=0.0]} {RNA1509_6234} {RNA1310_1443.1} {RNA815_7720.1}

Mlig455_013312 {REF} {Length: 4785} {TRANSSPLICED} {Pfam: Foie gras liver health family 1 [PF11817.10, score=168.5]; Gryzun, putative Golgi trafficking [PF12742.9, score=42.9]; Gryzun, putative trafficking through Golgi [PF07919.14, score=42.5]} {Human: ENSG00000168538, TRAPPC11, trafficking protein particle complex 11, [RH, Score=769, Expect=0.0]} {Mouse: ENSMUSG00000038102, Trappc11, trafficking protein particle complex 11, [RH, Score=776, Expect=0.0]} {Dmel: FBgn0035416, gry, gryzun, [RH, Score=402, Expect=2e-119]} {Celegans: WBGene00015173, trpp-11, TRansport Protein Particle, [RH, Score=214, Expect=1e-56]} {Smed: dd_Smed_v6_4563_0_4, dd_Smed_v6_4563_0_4, [RH, Score=681, Expect=0.0]} {RNA1509_6234} {RNA1310_1443.1} {RNA815_7720.1}

Cumulative graph for MligTC455_15622

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-5.928	4.303	0.13826	0.74386
RegionR2	1.249	4.303	0.11989	0.42892
RegionR3	0.911	4.303	0.24319	0.78575
RegionR4	1.708	4.303	0.02431	0.11697
RegionR5	1.933	4.303	0.00039	0.00483
RegionR6	0.712	4.303	0.39716	0.97008
RegionR7	0.074	4.303	0.82451	1.00000
RegionR8	-0.659	4.303	0.96941	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	7.361	4.303	0.03543	0.64776
RegenerationR2	-0.11	4.303	0.78095	0.98356
RegenerationR3	0.018	4.303	0.97151	1.00000
RegenerationR4	0.226	4.303	0.64150	0.92817
RegenerationR5	0.321	4.303	0.44060	0.82480
RegenerationR6	-0.009	4.303	0.98518	1.00000
RegenerationBL	0.487	4.303	0.43643	0.80439
RegenerationTP	0.82	4.303	0.24176	0.68796

Genes with expression patterns similar to MligTC455_15622

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_15622	731	15.22	Mlig455_013217, Mlig455_013312	Neo: - Age: - Region-enriched R5: 1.933/0.00483	TRAPPC11	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_013217 {REF} {Length: 4928} {TRANSSPLICED} {Pfam: Foie gras liver health family 1 [PF11817.10, score=168.6]; Gryzun, putative Golgi trafficking [PF12742.9, score=42.9]; Gryzun, putative trafficking through Golgi [PF07919.14, score=42.3]} {Human: ENSG00000168538, TRAPPC11, trafficking protein particle complex 11, [RH, Score=769, Expect=0.0]} {Mouse: ENSMUSG00000038102, Trappc11, trafficking protein particle complex 11, [RH, Score=777, Expect=0.0]} {Dmel: FBgn0035416, gry, gryzun, [RH, Score=402, Expect=2e-119]} {Celegans: WBGene00015173, trpp-11, TRansport Protein Particle, [RH, Score=214, Expect=1e-56]} {Smed: dd_Smed_v6_4563_0_4, dd_Smed_v6_4563_0_4, [RH, Score=681, Expect=0.0]} {RNA1509_6234} {RNA1310_1443.1} {RNA815_7720.1} Mlig455_013312 {REF} {Length: 4785} {TRANSSPLICED} {Pfam: Foie gras liver health family 1 [PF11817.10, score=168.5]; Gryzun, putative Golgi trafficking [PF12742.9, score=42.9]; Gryzun, putative trafficking through Golgi [PF07919.14, score=42.5]} {Human: ENSG00000168538, TRAPPC11, trafficking protein particle complex 11, [RH, Score=769, Expect=0.0]} {Mouse: ENSMUSG00000038102, Trappc11, trafficking protein particle complex 11, [RH, Score=776, Expect=0.0]} {Dmel: FBgn0035416, gry, gryzun, [RH, Score=402, Expect=2e-119]} {Celegans: WBGene00015173, trpp-11, TRansport Protein Particle, [RH, Score=214, Expect=1e-56]} {Smed: dd_Smed_v6_4563_0_4, dd_Smed_v6_4563_0_4, [RH, Score=681, Expect=0.0]} {RNA1509_6234} {RNA1310_1443.1} {RNA815_7720.1}
2.	MligTC455_15621	381	7.94	Mlig455_013242	Neo: - Age: - Region-enriched R5: 1.802/0.02088	TRAPPC11	5.959	0.999	0.997	0.999	0.999	0.965	1.000	Mlig455_013242 {REF} {Length: 3943} {Pfam: Gryzun, putative trafficking through Golgi [PF07919.14, score=46.1]; Gryzun, putative Golgi trafficking [PF12742.9, score=44.1]} {Human: ENSG00000168538, TRAPPC11, trafficking protein particle complex 11, [Score=187, Expect=9e-51]} {Mouse: ENSMUSG00000038102, Trappc11, trafficking protein particle complex 11, [Score=186, Expect=2e-49]} {Smed: dd_Smed_v6_4563_0_2, dd_Smed_v6_4563_0_2, [Score=150, Expect=3e-38]} {RNA1509_6234} {RNA1310_1443.1} {RNA815_7720.1}
3.	MligTC455_17250	422	8.79	Mlig455_002372	Neo: Int S/G2/M Age: Down-Up-Down Region-enriched R5: 1.866/0.00025	GNAI1	1.677	-	-	-	0.727	-	0.950	Mlig455_002372 {REF} {Length: 3277} {Pfam: G-protein alpha subunit [PF00503.22, score=411.7]; ADP-ribosylation factor family [PF00025.23, score=60.8]; Gtr1/RagA G protein conserved region [PF04670.14, score=22.2]} {Human: ENSG00000127955, GNAI1, G protein subunit alpha i1, [RH, Score=545, Expect=0.0]; ENSG00000114353, GNAI2, G protein subunit alpha i2, [RH, Score=539, Expect=0.0]; ENSG00000065135, GNAI3, G protein subunit alpha i3, [RH, Score=536, Expect=0.0]} {Mouse: ENSMUSG00000057614, Gnai1, guanine nucleotide binding protein (G protein), alpha inhibiting 1, [RH, Score=545, Expect=0.0]; ENSMUSG00000000001, Gnai3, guanine nucleotide binding protein (G protein), alpha inhibiting 3, [RH, Score=536, Expect=0.0]; ENSMUSG00000032562, Gnai2, guanine nucleotide binding protein (G protein), alpha inhibiting 2, [RH, Score=536, Expect=0.0]} {Dmel: FBgn0001104, Galphai, G protein alpha i subunit, [RH, Score=513, Expect=0.0]} {Celegans: WBGene00001678, gpa-16, Guanine nucleotide-binding protein alpha-16 subunit, [RH, Score=460, Expect=5e-163]} {Smed: dd_Smed_v6_5082_0_2, dd_Smed_v6_5082_0_2, [RH, Score=440, Expect=2e-155]} {RNA1509_28648, RNA1509_5180} {RNA1310_16162, RNA1509_28648, RNA1509_5180} {RNA1509_28648, RNA1509_5180, RNA815_5988}
4.	MligTC455_45169	904	18.83	Mlig455_033523, Mlig455_069214	Neo: - Age: -	ABRA	0.98	-	-	-	-	-	0.980	Mlig455_033523 {REF} {Length: 2107} {TRANSSPLICED} {Pfam: Costars [PF14705.8, score=94.7]} {Human: ENSG00000174429, ABRA, actin binding Rho activating protein, [Score=115, Expect=3e-30]} {Mouse: ENSMUSG00000042895, Abra, actin-binding Rho activating protein, [RH, Score=117, Expect=3e-31]} {Dmel: FBgn0023540, CG3630, [RH, Score=107, Expect=1e-27]} {Celegans: WBGene00009475, F36F2.1, [RH, Score=96.3, Expect=1e-25]} {RNA1509_29290, RNA1509_40875} {RNA1310_42514.1, RNA1509_29290, RNA1509_40875} {RNA1509_29290, RNA1509_40875, RNA815_24570} Mlig455_069214 {REF} {Length: 724} {TRANSSPLICED} {Pfam: Costars [PF14705.8, score=97.2]} {Human: ENSG00000174429, ABRA, actin binding Rho activating protein, [RH, Score=119, Expect=6e-32]} {Mouse: ENSMUSG00000042895, Abra, actin-binding Rho activating protein, [RH, Score=120, Expect=8e-33]} {Dmel: FBgn0023540, CG3630, [RH, Score=108, Expect=2e-28]} {Celegans: WBGene00009475, F36F2.1, [RH, Score=97.4, Expect=6e-26]} {RNA1509_37980} {RNA1310_42326, RNA1509_37980} {RNA1509_37980, RNA815_24570}
5.	MligTC455_45328	307	6.41	Mlig455_069747	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.371 Region-enriched R2: 3.524/0.00087	CBY1	0.971	-	-	0.971	-	-	-	Mlig455_069747 {REF} {Length: 1865} {Pfam: Chibby family [PF14645.8, score=103.6]} {Human: ENSG00000100211, CBY1, chibby family member 1, beta catenin antagonist, [RH, Score=85.5, Expect=1e-21]} {Mouse: ENSMUSG00000022428, Cby1, chibby family member 1, beta catenin antagonist, [RH, Score=95.9, Expect=3e-26]} {Smed: dd_Smed_v6_11618_0_1, dd_Smed_v6_11618_0_1, [Score=54.7, Expect=1e-10]} {RNA1509_21398, RNA1509_56624} {RNA1310_30284, RNA1509_56624} {RNA1509_56624, RNA815_13488}
6.	MligTC455_47293	677	14.09	Mlig455_021706	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.269	DHX38	0.967	-	-	-	-	-	0.967	Mlig455_021706 {REF} {Length: 4408} {TRANSSPLICED} {Pfam: Helicase associated domain (HA2) [PF04408.25, score=76.8]; Oligonucleotide/oligosaccharide-binding (OB)-fold [PF07717.18, score=52.7]; Helicase conserved C-terminal domain [PF00271.33, score=48.7]; AAA domain [PF13401.8, score=30.2]; DEAD/DEAH box helicase [PF00270.31, score=22.4]} {Human: ENSG00000140829, DHX38, DEAH-box helicase 38, [RH, Score=1274, Expect=0.0]} {Mouse: ENSMUSG00000037993, Dhx38, DEAH (Asp-Glu-Ala-His) box polypeptide 38, [RH, Score=1281, Expect=0.0]} {Dmel: FBgn0026713, l(1)G0007, lethal (1) G0007, [RH, Score=1262, Expect=0.0]} {Celegans: WBGene00003389, mog-1, Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1, [RH, Score=1181, Expect=0.0]} {Smed: dd_Smed_v6_1945_0_1, dd_Smed_v6_1945_0_1, [RH, Score=1061, Expect=0.0]} {RNA1509_13800, RNA1509_38171, RNA1509_59960} {RNA1310_2432, RNA1509_13800, RNA1509_38171, RNA1509_59960} {RNA1509_13800, RNA1509_38171, RNA1509_59960, RNA815_1319}
7.	MligTC455_24980	407	8.48	Mlig455_034705	Neo: - Age: -	TRAPPC1	0.961	-	-	-	-	-	0.961	Mlig455_034705 {REF} {Length: 1215} {TRANSSPLICED} {Pfam: Sybindin-like family [PF04099.14, score=96.9]} {Human: ENSG00000170043, TRAPPC1, trafficking protein particle complex 1, [RH, Score=126, Expect=3e-37]} {Mouse: ENSMUSG00000049299, Trappc1, trafficking protein particle complex 1, [RH, Score=127, Expect=1e-37]} {Dmel: FBgn0260860, Bet5, Blocked early in transport 5, [RH, Score=103, Expect=2e-28]} {Celegans: WBGene00077643, trpp-1, TRansport Protein Particle, [RH, Score=68.6, Expect=5e-15]} {Smed: dd_Smed_v6_9403_0_1, dd_Smed_v6_9403_0_1, [RH, Score=90.1, Expect=2e-23]} {RNA1509_48600, RNA1509_58389} {RNA1310_25160.1, RNA1509_48600, RNA1509_58389} {RNA1509_48600, RNA1509_58389, RNA815_14862}
8.	MligTC455_41438	835	17.39	Mlig455_058954	Neo: Int S/G2/M Age: Down-Up-Up	WDR46	0.958	-	-	-	-	-	0.958	Mlig455_058954 {REF} {Length: 3385} {TRANSSPLICED} {Pfam: BING4CT (NUC141) domain [PF08149.13, score=81.7]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=22.5]} {Human: ENSG00000204221, WDR46, WD repeat domain 46, [RH, Score=249, Expect=6e-75]; ENSG00000226916, WDR46, WD repeat domain 46, [RH, Score=249, Expect=6e-75]; ENSG00000236222, WDR46, WD repeat domain 46, [RH, Score=249, Expect=6e-75]; ENSG00000227057, WDR46, WD repeat domain 46, [RH, Score=249, Expect=6e-75]; ENSG00000206284, WDR46, WD repeat domain 46, [RH, Score=248, Expect=2e-74]} {Mouse: ENSMUSG00000024312, Wdr46, WD repeat domain 46, [RH, Score=252, Expect=7e-76]} {Dmel: FBgn0030000, CG2260, [RH, Score=257, Expect=3e-78]} {Celegans: WBGene00009211, wdr-46, WD Repeat protein, [RH, Score=250, Expect=5e-76]} {Smed: dd_Smed_v6_10180_0_1, dd_Smed_v6_10180_0_1, [RH, Score=240, Expect=1e-72]} {RNA1509_5871} {RNA1310_17370, RNA1509_5871} {RNA1509_5871, RNA815_4556}
9.	MligTC455_40134	396	8.25	Mlig455_003061, Mlig455_003267	Neo: Int S/G2/M Age: -		0.955	-	-	-	-	-	0.955	Mlig455_003061 {REF} {Length: 2554} {Pfam: WD domain, G-beta repeat [PF00400.34, score=27.5]} {RNA1509_32538, RNA1509_54728} {RNA1310_22220, RNA1509_32538, RNA1509_54728} {RNA1509_32538, RNA1509_54728, RNA815_9624} Mlig455_003267 {REF} {Length: 3804} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=29.3]} {Celegans: WBGene00006481, plrg-1, PLeiotropic ReGulator (Vertebrate) homolog, [Score=48.9, Expect=4e-06]} {RNA1509_32538} {RNA1310_22220} {RNA815_9624}
10.	MligTC455_07731	1424	29.67	Mlig455_009815	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.273 Region-enriched R5: 1.342/0.00003	KRR1	0.952	-	-	-	-	-	0.952	Mlig455_009815 {REF} {Length: 1306} {TRANSSPLICED} {Pfam: Krr1 KH1 domain [PF17903.3, score=96.8]} {Human: ENSG00000111615, KRR1, KRR1, small subunit processome component homolog, [RH, Score=334, Expect=7e-113]} {Mouse: ENSMUSG00000063334, Krr1, KRR1, small subunit (SSU) processome component, homolog (yeast), [RH, Score=338, Expect=1e-114]} {Dmel: FBgn0020305, dbe, dribble, [RH, Score=317, Expect=8e-107]} {Celegans: WBGene00015461, C05C8.2, KRR1 small subunit processome component, [RH, Score=294, Expect=7e-98]} {Smed: dd_Smed_v6_3526_0_1, dd_Smed_v6_3526_0_1, [RH, Score=225, Expect=1e-71]} {RNA1509_11747, RNA1509_57395} {RNA1310_16639.1, RNA1509_57395} {RNA1509_57395, RNA815_11360}
11.	MligTC455_34953	479	9.99	Mlig455_010539	Neo: - Age: Down-Up-Up	CENPS-CORT	0.952	-	-	-	-	-	0.952	Mlig455_010539 {REF} {Length: 602} {TRANSSPLICED} {Pfam: CENP-S protein [PF15630.8, score=80.6]; Centromere kinetochore component CENP-T histone fold [PF15511.8, score=25.9]} {Human: ENSG00000251503, CENPS-CORT, CENPS-CORT readthrough, [RH, Score=78.2, Expect=1e-18]; ENSG00000175279, CENPS, centromere protein S, [RH, Score=78.2, Expect=1e-18]} {Mouse: ENSMUSG00000073705, Cenps, centromere protein S, [RH, Score=80.1, Expect=1e-19]} {Celegans: WBGene00013014, Y48E1C.1, [Score=49.7, Expect=1e-07]} {Smed: dd_Smed_v6_6312_0_1, dd_Smed_v6_6312_0_1, [RH, Score=58.2, Expect=1e-11]} {RNA1509_13037} {RNA1310_36934.2} {RNA815_18143}
12.	MligTC455_36647	786	16.38	Mlig455_017686, Mlig455_053756	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.309 Region-enriched R4: 2.139/0.02125	NWD1, NWD2	0.951	-	-	0.951	-	-	-	Mlig455_017686 {REF} {Length: 5971} {Pfam: AAA domain [PF13401.8, score=21.4]; AAA ATPase domain [PF13191.8, score=19.6]} {Human: ENSG00000174145, NWD2, NACHT and WD repeat domain containing 2, [Score=61.2, Expect=2e-08]} {Mouse: ENSMUSG00000048148, Nwd1, NACHT and WD repeat domain containing 1, [Score=58.2, Expect=1e-07]; ENSMUSG00000090061, Nwd2, NACHT and WD repeat domain containing 2, [Score=57.0, Expect=3e-07]} {Dmel: FBgn0038397, CG10185, [Score=54.7, Expect=1e-06]} {RNA1509_31906} {RNA1310_765} {RNA815_1377} Mlig455_053756 {REF} {Length: 5627} {TRANSSPLICED} {Pfam: AAA domain [PF13401.8, score=21.3]; AAA ATPase domain [PF13191.8, score=19.2]} {Human: ENSG00000188039, NWD1, NACHT and WD repeat domain containing 1, [Score=63.5, Expect=4e-09]; ENSG00000174145, NWD2, NACHT and WD repeat domain containing 2, [Score=60.5, Expect=3e-08]} {Mouse: ENSMUSG00000048148, Nwd1, NACHT and WD repeat domain containing 1, [Score=59.3, Expect=5e-08]} {RNA1509_23443} {RNA1310_765} {RNA815_1377}
13.	MligTC455_51884	566	11.79	Mlig455_004230	Neo: - Age: Down-Down-Up	CCDC93	0.951	-	-	-	-	-	0.951	Mlig455_004230 {REF} {Length: 3317} {TRANSSPLICED} {Pfam: CCDC93, coiled-coil domain [PF09762.11, score=190.2]} {Human: ENSG00000125633, CCDC93, coiled-coil domain containing 93, [RH, Score=347, Expect=4e-111]} {Mouse: ENSMUSG00000026339, Ccdc93, coiled-coil domain containing 93, [RH, Score=351, Expect=7e-113]} {Dmel: FBgn0025519, fidipidine, [RH, Score=271, Expect=1e-82]} {Celegans: WBGene00015815, C16A11.2, [RH, Score=93.2, Expect=1e-19]} {Smed: dd_Smed_v6_2519_0_1, dd_Smed_v6_2519_0_1, [RH, Score=295, Expect=9e-92]} {RNA1509_15297} {RNA1310_447.1} {RNA815_4590.1}
14.	MligTC455_29329	1510	31.46	Mlig455_011494	Neo: - Age: Down-Down-Up, logFC(26M/2M)=0.318	OLA1	0.95	-	-	-	-	-	0.950	Mlig455_011494 {REF} {Length: 1556} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF933) [PF06071.15, score=132.0]; 50S ribosome-binding GTPase [PF01926.25, score=52.8]; Ferrous iron transport protein B [PF02421.20, score=28.4]} {Human: ENSG00000138430, OLA1, Obg like ATPase 1, [Score=457, Expect=8e-161]} {Mouse: ENSMUSG00000027108, Ola1, Obg-like ATPase 1, [Score=456, Expect=1e-160]} {Dmel: FBgn0030151, CG1354, [Score=477, Expect=6e-169]} {Celegans: WBGene00012344, ola-1, Obg-like ATPase 1, [Score=466, Expect=1e-164]} {Smed: dd_Smed_v6_2199_0_1, dd_Smed_v6_2199_0_1, [Score=481, Expect=8e-171]} {RNA1509_3669} {RNA1310_18424} {RNA815_7325}
15.	MligTC455_43024	907	18.9	Mlig455_043735, Mlig455_043739, Mlig455_043829, Mlig455_047419	Neo: - Age: logFC(26M/2M)=0.232		0.95	-	-	0.950	-	-	-	Mlig455_043735 {REF} {Length: 2623} {TRANSSPLICED} {RNA1509_19250} {RNA1310_2879.1} {RNA815_7299} Mlig455_043739 {REF} {Length: 2554} {TRANSSPLICED} {RNA1509_19250} {RNA1310_2879.1} {RNA815_7299} Mlig455_043829 {REF} {Length: 2397} {TRANSSPLICED} {RNA1509_44171} {RNA1310_27247.1} {RNA815_7299} Mlig455_047419 {REF} {Length: 2292} {TRANSSPLICED} {RNA1509_44171} {RNA1310_27247.1} {RNA815_7299}

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