Data search
Results for MligTC455_43024
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_43024 | 907 | 18.90 | Mlig455_043735, Mlig455_043739, Mlig455_043829, Mlig455_047419 | Neo: - Age: logFC(26M/2M)=0.232 |
Mlig455_043735 {REF} {Length: 2623} {TRANSSPLICED} {RNA1509_19250} {RNA1310_2879.1} {RNA815_7299} Mlig455_043739 {REF} {Length: 2554} {TRANSSPLICED} {RNA1509_19250} {RNA1310_2879.1} {RNA815_7299} Mlig455_043829 {REF} {Length: 2397} {TRANSSPLICED} {RNA1509_44171} {RNA1310_27247.1} {RNA815_7299} Mlig455_047419 {REF} {Length: 2292} {TRANSSPLICED} {RNA1509_44171} {RNA1310_27247.1} {RNA815_7299} |
Cumulative graph for MligTC455_43024
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.867 | 4.575 | 0.49434 | 1.00000 | |
| RegionR2 | 0.64 | 4.575 | 0.29368 | 0.68222 | |
| RegionR3 | -0.226 | 4.575 | 0.65131 | 1.00000 | |
| RegionR4 | 0.73 | 4.575 | 0.18451 | 0.45650 | |
| RegionR5 | 0.38 | 4.575 | 0.38207 | 0.73670 | |
| RegionR6 | -0.388 | 4.575 | 0.43188 | 0.99534 | |
| RegionR7 | 0.294 | 4.575 | 0.58349 | 1.00000 | |
| RegionR8 | -0.562 | 4.575 | 0.41512 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.93 | 4.575 | 0.23027 | 0.96044 | |
| RegenerationR2 | 0.077 | 4.575 | 0.88012 | 1.00000 | |
| RegenerationR3 | 1.163 | 4.575 | 0.04467 | 0.36937 | |
| RegenerationR4 | 0.059 | 4.575 | 0.91887 | 1.00000 | |
| RegenerationR5 | 0.553 | 4.575 | 0.29834 | 0.72588 | |
| RegenerationR6 | 1.357 | 4.575 | 0.01869 | 0.16888 | |
| RegenerationBL | 0.887 | 4.575 | 0.12558 | 0.42070 | |
| RegenerationTP | 0.283 | 4.575 | 0.66632 | 0.99774 |
Genes with expression patterns similar to MligTC455_43024
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_43024 | 907 | 18.9 | Mlig455_043735, Mlig455_043739, Mlig455_043829, Mlig455_047419 | Neo: - Age: logFC(26M/2M)=0.232 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_043735 {REF} {Length: 2623} {TRANSSPLICED} {RNA1509_19250} {RNA1310_2879.1} {RNA815_7299} Mlig455_043739 {REF} {Length: 2554} {TRANSSPLICED} {RNA1509_19250} {RNA1310_2879.1} {RNA815_7299} Mlig455_043829 {REF} {Length: 2397} {TRANSSPLICED} {RNA1509_44171} {RNA1310_27247.1} {RNA815_7299} Mlig455_047419 {REF} {Length: 2292} {TRANSSPLICED} {RNA1509_44171} {RNA1310_27247.1} {RNA815_7299} |
|
| 2. | MligTC455_25593 | 620 | 12.91 | Mlig455_010640 | Neo: - Age: Up-Down-Up |
0.971 | - | - | - | - | - | 0.971 | Mlig455_010640 {REF} {Length: 6295} {TRANSSPLICED} {RNA1509_21874, RNA1509_21918, RNA1509_4078} {RNA1310_3072, RNA1509_21874, RNA1509_21918} {RNA1509_21874, RNA1509_21918, RNA815_5186} | |
| 3. | MligTC455_52928 | 703 | 14.65 | Mlig455_047484 | Neo: - Age: - |
MAGI3 | 0.962 | - | - | - | - | - | 0.962 | Mlig455_047484 {REF} {Length: 4954} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=218.7]; PDZ domain [PF17820.3, score=142.6]; PDZ domain [PF13180.8, score=85.4]; Guanylate kinase [PF00625.23, score=42.7]; WW domain [PF00397.28, score=20.6]} {Human: ENSG00000081026, MAGI3, membrane associated guanylate kinase, WW and PDZ domain containing 3, [RH, Score=288, Expect=1e-80]} {Mouse: ENSMUSG00000040003, Magi2, membrane associated guanylate kinase, WW and PDZ domain containing 2, [RH, Score=315, Expect=2e-89]} {Dmel: FBgn0034590, Magi, [RH, Score=204, Expect=2e-53]} {Celegans: WBGene00010444, magi-1, MAGI (Membrane Associated Guanylate kinase Inverted) homolog, [Score=300, Expect=2e-85]} {Smed: dd_Smed_v6_854_0_3, dd_Smed_v6_854_0_3, [RH, Score=657, Expect=0.0]} {RNA1509_8632} {RNA1310_3024} {RNA815_10565} |
| 4. | MligTC455_25839 | 526 | 10.96 | Mlig455_063298 | Neo: - Age: - |
0.961 | - | - | 0.961 | - | - | - | Mlig455_063298 {REF} {Length: 1724} {Pfam: Homeodomain-like domain [PF13384.8, score=21.8]; Winged helix-turn helix [PF13551.8, score=20.9]} {RNA1509_32923, RNA1509_34813, RNA1509_41268} {RNA1310_71250, RNA1509_34813, RNA1509_41268} {RNA1509_34813, RNA1509_41268, RNA815_40067.2} | |
| 5. | MligTC455_19137 | 807 | 16.82 | Mlig455_067132 | Neo: Irradiation Age: - |
KDM4C | 0.958 | - | - | - | - | - | 0.958 | Mlig455_067132 {REF} {Length: 4923} {TRANSSPLICED} {Pfam: JmjC domain, hydroxylase [PF02373.24, score=145.4]; PHD-zinc-finger like domain [PF13832.8, score=57.1]; jmjN domain [PF02375.19, score=52.4]; PHD-finger [PF13831.8, score=36.5]; Jumonji domain-containing protein 2A Tudor domain [PF18104.3, score=34.5]; PHD-finger [PF00628.31, score=29.8]; PHD-like zinc-binding domain [PF13771.8, score=26.1]; Domain of unknown function (DUF4537) [PF15057.8, score=22.1]; DNA repair protein Crb2 Tudor domain [PF18115.3, score=18.9]} {Human: ENSG00000107077, KDM4C, lysine demethylase 4C, [RH, Score=479, Expect=5e-151]; ENSG00000066135, KDM4A, lysine demethylase 4A, [RH, Score=475, Expect=7e-147]; ENSG00000127663, KDM4B, lysine demethylase 4B, [RH, Score=462, Expect=4e-141]} {Mouse: ENSMUSG00000033326, Kdm4a, lysine (K)-specific demethylase 4A, [RH, Score=476, Expect=4e-147]; ENSMUSG00000028397, Kdm4c, lysine (K)-specific demethylase 4C, [RH, Score=473, Expect=4e-146]; ENSMUSG00000024201, Kdm4b, lysine (K)-specific demethylase 4B, [RH, Score=467, Expect=3e-144]} {Dmel: FBgn0053182, Kdm4B, Lysine (K)-specific demethylase 4B, [RH, Score=474, Expect=6e-151]} {Celegans: WBGene00012982, jmjd-2, Lysine-specific demethylase 4, [RH, Score=328, Expect=3e-95]} {Smed: dd_Smed_v6_10398_0_1, dd_Smed_v6_10398_0_1, [RH, Score=523, Expect=5e-167]} {RNA1509_11069, RNA1509_19042, RNA1509_37896, RNA1509_42721} {RNA1310_1204, RNA1509_11069, RNA1509_19042, RNA1509_37896, RNA1509_42721} {RNA1509_11069, RNA1509_19042, RNA1509_37896, RNA1509_42721, RNA815_6410} |
| 6. | MligTC455_25218 | 1025 | 21.35 | Mlig455_021728 | Neo: - Age: - |
APC | 0.951 | - | - | - | - | - | 0.951 | Mlig455_021728 {REF} {Length: 7056} {TRANSSPLICED} {Pfam: Armadillo/beta-catenin-like repeat [PF00514.25, score=36.0]; SAMP Motif [PF05924.13, score=24.0]} {Human: ENSG00000134982, APC, APC, WNT signaling pathway regulator, [RH, Score=284, Expect=4e-76]; ENSG00000115266, APC2, APC2, WNT signaling pathway regulator, [RH, Score=270, Expect=4e-72]} {Mouse: ENSMUSG00000005871, Apc, adenomatosis polyposis coli, [RH, Score=283, Expect=6e-76]; ENSMUSG00000020135, Apc2, adenomatosis polyposis coli 2, [RH, Score=272, Expect=8e-73]} {Dmel: FBgn0015589, Apc, APC-like, [RH, Score=265, Expect=2e-70]} {Celegans: WBGene00000156, apr-1, Adenomatous polyposis coli protein-related protein 1, [RH, Score=124, Expect=6e-28]} {Smed: dd_Smed_v6_6966_0_1, dd_Smed_v6_6966_0_1, [RH, Score=235, Expect=5e-62]} {RNA1509_26796, RNA1509_3590} {RNA1310_116.2, RNA1509_26796} {RNA1509_26796, RNA815_4707} |
| 7. | MligTC455_40191 | 742 | 15.45 | Mlig455_057496 | Neo: - Age: - |
CPSF4L | 0.951 | - | - | - | - | - | 0.951 | Mlig455_057496 {REF} {Length: 5411} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4603) [PF15376.8, score=31.4]; Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=29.4]; RNA-binding, Nab2-type zinc finger [PF14608.8, score=23.8]; Torus domain [PF16131.7, score=23.6]; Zinc finger domain [PF18345.3, score=20.5]} {Human: ENSG00000187959, CPSF4L, cleavage and polyadenylation specific factor 4 like, [Score=51.2, Expect=8e-07]; ENSG00000170871, KIAA0232, KIAA0232, [Score=50.1, Expect=1e-05]} {Mouse: ENSMUSG00000029190, D5Ertd579e, DNA segment, Chr 5, ERATO Doi 579, expressed, [Score=55.8, Expect=2e-07]} {Smed: dd_Smed_v6_14012_0_1, dd_Smed_v6_14012_0_1, [RH, Score=99.4, Expect=1e-21]} {RNA1509_12987, RNA1509_13189, RNA1509_28003, RNA1509_32009, RNA1509_3288, RNA1509_41548, RNA1509_50815} {RNA1310_12659.1, RNA1509_12987, RNA1509_13189, RNA1509_28003, RNA1509_32009, RNA1509_3288, RNA1509_41548, RNA1509_50815} {RNA1509_12987, RNA1509_13189, RNA1509_28003, RNA1509_32009, RNA1509_3288, RNA1509_41548, RNA1509_50815, RNA815_306} |
| 8. | MligTC455_15621 | 381 | 7.94 | Mlig455_013242 | Neo: - Age: - Region-enriched R5: 1.802/0.02088 |
TRAPPC11 | 0.95 | - | - | 0.950 | - | - | - | Mlig455_013242 {REF} {Length: 3943} {Pfam: Gryzun, putative trafficking through Golgi [PF07919.14, score=46.1]; Gryzun, putative Golgi trafficking [PF12742.9, score=44.1]} {Human: ENSG00000168538, TRAPPC11, trafficking protein particle complex 11, [Score=187, Expect=9e-51]} {Mouse: ENSMUSG00000038102, Trappc11, trafficking protein particle complex 11, [Score=186, Expect=2e-49]} {Smed: dd_Smed_v6_4563_0_2, dd_Smed_v6_4563_0_2, [Score=150, Expect=3e-38]} {RNA1509_6234} {RNA1310_1443.1} {RNA815_7720.1} |
| 9. | MligTC455_15622 | 731 | 15.22 | Mlig455_013217, Mlig455_013312 | Neo: - Age: - Region-enriched R5: 1.933/0.00483 |
TRAPPC11 | 0.95 | - | - | 0.950 | - | - | - | Mlig455_013217 {REF} {Length: 4928} {TRANSSPLICED} {Pfam: Foie gras liver health family 1 [PF11817.10, score=168.6]; Gryzun, putative Golgi trafficking [PF12742.9, score=42.9]; Gryzun, putative trafficking through Golgi [PF07919.14, score=42.3]} {Human: ENSG00000168538, TRAPPC11, trafficking protein particle complex 11, [RH, Score=769, Expect=0.0]} {Mouse: ENSMUSG00000038102, Trappc11, trafficking protein particle complex 11, [RH, Score=777, Expect=0.0]} {Dmel: FBgn0035416, gry, gryzun, [RH, Score=402, Expect=2e-119]} {Celegans: WBGene00015173, trpp-11, TRansport Protein Particle, [RH, Score=214, Expect=1e-56]} {Smed: dd_Smed_v6_4563_0_4, dd_Smed_v6_4563_0_4, [RH, Score=681, Expect=0.0]} {RNA1509_6234} {RNA1310_1443.1} {RNA815_7720.1} Mlig455_013312 {REF} {Length: 4785} {TRANSSPLICED} {Pfam: Foie gras liver health family 1 [PF11817.10, score=168.5]; Gryzun, putative Golgi trafficking [PF12742.9, score=42.9]; Gryzun, putative trafficking through Golgi [PF07919.14, score=42.5]} {Human: ENSG00000168538, TRAPPC11, trafficking protein particle complex 11, [RH, Score=769, Expect=0.0]} {Mouse: ENSMUSG00000038102, Trappc11, trafficking protein particle complex 11, [RH, Score=776, Expect=0.0]} {Dmel: FBgn0035416, gry, gryzun, [RH, Score=402, Expect=2e-119]} {Celegans: WBGene00015173, trpp-11, TRansport Protein Particle, [RH, Score=214, Expect=1e-56]} {Smed: dd_Smed_v6_4563_0_4, dd_Smed_v6_4563_0_4, [RH, Score=681, Expect=0.0]} {RNA1509_6234} {RNA1310_1443.1} {RNA815_7720.1} |
| 10. | MligTC455_27916 | 96 | 1.99 | Mlig455_039205 | Neo: Int S/G2/M Age: - |
0.95 | - | - | - | 0.950 | - | - | Mlig455_039205 {REF} {Length: 227} {NoTransDecoderORF} {RNA1310_27863.2} {RNA815_57847} |
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