Data search
Results for MligTC455_51884
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_51884 | 566 | 11.79 | Mlig455_004230 | Neo: - Age: Down-Down-Up |
CCDC93 | Mlig455_004230 {REF} {Length: 3317} {TRANSSPLICED} {Pfam: CCDC93, coiled-coil domain [PF09762.11, score=190.2]} {Human: ENSG00000125633, CCDC93, coiled-coil domain containing 93, [RH, Score=347, Expect=4e-111]} {Mouse: ENSMUSG00000026339, Ccdc93, coiled-coil domain containing 93, [RH, Score=351, Expect=7e-113]} {Dmel: FBgn0025519, fidipidine, [RH, Score=271, Expect=1e-82]} {Celegans: WBGene00015815, C16A11.2, [RH, Score=93.2, Expect=1e-19]} {Smed: dd_Smed_v6_2519_0_1, dd_Smed_v6_2519_0_1, [RH, Score=295, Expect=9e-92]} {RNA1509_15297} {RNA1310_447.1} {RNA815_4590.1} |
Cumulative graph for MligTC455_51884
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.73 | 3.984 | 0.18763 | 0.81986 | |
| RegionR2 | -1.347 | 3.984 | 0.01230 | 0.11461 | |
| RegionR3 | -0.049 | 3.984 | 0.90182 | 1.00000 | |
| RegionR4 | 1.113 | 3.984 | 0.02350 | 0.11427 | |
| RegionR5 | 0.252 | 3.984 | 0.48014 | 0.84354 | |
| RegionR6 | -0.402 | 3.984 | 0.34778 | 0.93336 | |
| RegionR7 | 0.118 | 3.984 | 0.83418 | 1.00000 | |
| RegionR8 | -1.415 | 3.984 | 0.13043 | 0.66195 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -8.266 | 3.984 | 0.03086 | 0.63108 | |
| RegenerationR2 | 0.758 | 3.984 | 0.05615 | 0.38977 | |
| RegenerationR3 | -0.174 | 3.984 | 0.67940 | 0.94012 | |
| RegenerationR4 | -0.154 | 3.984 | 0.71085 | 0.95756 | |
| RegenerationR5 | 0.316 | 3.984 | 0.41362 | 0.80779 | |
| RegenerationR6 | 0.245 | 3.984 | 0.58376 | 0.85993 | |
| RegenerationBL | 1.285 | 3.984 | 0.01804 | 0.14408 | |
| RegenerationTP | 0.093 | 3.984 | 0.89848 | 1.00000 |
Genes with expression patterns similar to MligTC455_51884
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_51884 | 566 | 11.79 | Mlig455_004230 | Neo: - Age: Down-Down-Up |
CCDC93 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_004230 {REF} {Length: 3317} {TRANSSPLICED} {Pfam: CCDC93, coiled-coil domain [PF09762.11, score=190.2]} {Human: ENSG00000125633, CCDC93, coiled-coil domain containing 93, [RH, Score=347, Expect=4e-111]} {Mouse: ENSMUSG00000026339, Ccdc93, coiled-coil domain containing 93, [RH, Score=351, Expect=7e-113]} {Dmel: FBgn0025519, fidipidine, [RH, Score=271, Expect=1e-82]} {Celegans: WBGene00015815, C16A11.2, [RH, Score=93.2, Expect=1e-19]} {Smed: dd_Smed_v6_2519_0_1, dd_Smed_v6_2519_0_1, [RH, Score=295, Expect=9e-92]} {RNA1509_15297} {RNA1310_447.1} {RNA815_4590.1} |
| 2. | MligTC455_41161 | 1723 | 35.89 | Mlig455_015003, Mlig455_038650 | Neo: - Age: - Regeneration-upregulated R6: 1.721 Regeneration-enriched R6: 1.721 |
RBBP6 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_015003 {REF} {Length: 3795} {TRANSSPLICED} {Pfam: DWNN domain [PF08783.13, score=49.8]; U-box domain [PF04564.17, score=27.2]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=20.9]; Ring finger domain [PF13639.8, score=20.2]} {Human: ENSG00000122257, RBBP6, RB binding protein 6, ubiquitin ligase, [Score=78.2, Expect=7e-14]} {Mouse: ENSMUSG00000030779, Rbbp6, retinoblastoma binding protein 6, ubiquitin ligase, [Score=78.2, Expect=5e-14]} {Dmel: FBgn0086129, snama, something that sticks like glue, [Score=96.3, Expect=9e-20]} {Celegans: WBGene00009477, rbpl-1, Retinoblastoma Binding Protein Like, [Score=61.6, Expect=3e-09]} {Smed: dd_Smed_v6_6556_0_1, dd_Smed_v6_6556_0_1, [Score=80.1, Expect=3e-15]} {RNA1509_48313, RNA1509_5537} {RNA1310_2775, RNA1509_48313} {RNA1509_48313, RNA815_5708} Mlig455_038650 {REF} {Length: 3834} {TRANSSPLICED} {Pfam: DWNN domain [PF08783.13, score=49.8]; U-box domain [PF04564.17, score=28.5]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.8]; Ring finger domain [PF13639.8, score=21.3]} {Human: ENSG00000122257, RBBP6, RB binding protein 6, ubiquitin ligase, [Score=80.9, Expect=1e-14]} {Mouse: ENSMUSG00000030779, Rbbp6, retinoblastoma binding protein 6, ubiquitin ligase, [Score=80.5, Expect=9e-15]} {Dmel: FBgn0086129, snama, something that sticks like glue, [Score=91.3, Expect=3e-18]} {Celegans: WBGene00009477, rbpl-1, Retinoblastoma Binding Protein Like, [Score=62.0, Expect=2e-09]} {Smed: dd_Smed_v6_6556_0_1, dd_Smed_v6_6556_0_1, [RH, Score=85.9, Expect=4e-17]} {RNA1509_5537} {RNA1310_2775} {RNA815_5708} |
| 3. | MligTC455_34775 | 1330 | 27.71 | Mlig455_029221 | Neo: Germline Age: - |
ERP44 | 0.953 | - | - | - | - | 0.953 | - | Mlig455_029221 {REF} {Length: 2684} {TRANSSPLICED} {Pfam: Thioredoxin-like domain [PF13848.8, score=117.6]; Thioredoxin [PF00085.22, score=69.3]; Calsequestrin [PF01216.19, score=23.4]; OST3 / OST6 family, transporter family [PF04756.15, score=22.4]; Thioredoxin-like domain [PF13098.8, score=20.1]} {Human: ENSG00000023318, ERP44, endoplasmic reticulum protein 44, [Score=266, Expect=5e-85]} {Mouse: ENSMUSG00000028343, Erp44, endoplasmic reticulum protein 44, [Score=272, Expect=3e-87]} {Dmel: FBgn0030734, CG9911, [Score=280, Expect=2e-90]} {Celegans: WBGene00016278, erp-44.1, [Score=272, Expect=6e-88]} {Smed: dd_Smed_v6_2276_0_1, dd_Smed_v6_2276_0_1, [Score=248, Expect=2e-78]} {RNA1509_14285, RNA1509_28019, RNA1509_4780} {RNA1310_8582.1, RNA1509_14285, RNA1509_28019} {RNA1509_14285, RNA1509_28019, RNA815_6943} |
| 4. | MligTC455_14268 | 441 | 9.19 | Mlig455_055856 | Neo: - Age: logFC(26M/2M)=0.305 Region-enriched R5: 1.111/0.03055 |
FXN | 0.952 | - | - | - | - | - | 0.952 | Mlig455_055856 {REF} {Length: 835} {TRANSSPLICED} {Pfam: Frataxin-like domain [PF01491.18, score=130.6]} {Human: ENSG00000165060, FXN, frataxin, [RH, Score=115, Expect=1e-31]} {Mouse: ENSMUSG00000059363, Fxn, frataxin, [RH, Score=114, Expect=3e-31]} {Dmel: FBgn0030092, fh, frataxin, [RH, Score=108, Expect=1e-29]} {Celegans: WBGene00001486, frh-1, Frataxin, mitochondrial, [RH, Score=107, Expect=7e-30]} {Smed: dd_Smed_v6_10952_0_1, dd_Smed_v6_10952_0_1, [RH, Score=101, Expect=3e-27]} {RNA1509_39485} {RNA1310_34480.1} {RNA815_16743} |
| 5. | MligTC455_16354 | 819 | 17.05 | Mlig455_046738, Mlig455_046828 | Neo: Irradiation Age: Up-Down-Down Regeneration-downregulated TP: -2.365 Regeneration-depleted TP: -2.365 |
RPS6KA1 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_046738 {REF} {Length: 889} {Pfam: Protein kinase domain [PF00069.27, score=58.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=30.0]} {Human: ENSG00000117676, RPS6KA1, ribosomal protein S6 kinase A1, [Score=168, Expect=6e-49]; ENSG00000281877, RPS6KA1, ribosomal protein S6 kinase A1, [Score=168, Expect=6e-49]; ENSG00000072133, RPS6KA6, ribosomal protein S6 kinase A6, [Score=168, Expect=9e-49]; ENSG00000177189, RPS6KA3, ribosomal protein S6 kinase A3, [Score=167, Expect=3e-48]; ENSG00000071242, RPS6KA2, ribosomal protein S6 kinase A2, [Score=166, Expect=6e-48]} {Mouse: ENSMUSG00000003644, Rps6ka1, ribosomal protein S6 kinase polypeptide 1, [Score=170, Expect=1e-49]; ENSMUSG00000031309, Rps6ka3, ribosomal protein S6 kinase polypeptide 3, [Score=167, Expect=2e-48]; ENSMUSG00000023809, Rps6ka2, ribosomal protein S6 kinase, polypeptide 2, [Score=166, Expect=5e-48]; ENSMUSG00000116203, Rps6ka6, ribosomal protein S6 kinase polypeptide 6, [Score=163, Expect=4e-47]; ENSMUSG00000025665, Rps6ka6, ribosomal protein S6 kinase polypeptide 6, [Score=163, Expect=4e-47]} {Dmel: FBgn0262866, S6kII, Ribosomal protein S6 kinase II, [Score=156, Expect=2e-44]} {Celegans: WBGene00011352, rskn-1, Putative ribosomal protein S6 kinase alpha-1, [Score=170, Expect=7e-50]} {Smed: dd_Smed_v6_4316_0_1, dd_Smed_v6_4316_0_1, [Score=154, Expect=3e-44]} {RNA1509_13802} {RNA1310_6706.1} {RNA815_5503} Mlig455_046828 {REF} {Length: 9072} {RNA1509_13802, RNA1509_34330} {RNA1310_6706.1, RNA1509_13802, RNA1509_34330} {RNA1509_13802, RNA1509_34330, RNA815_5503} |
| 6. | MligTC455_43441 | 981 | 20.44 | Mlig455_030636, Mlig455_031007 | Neo: Int S/G2/M Age: - |
0.952 | - | - | - | - | - | 0.952 | Mlig455_030636 {REF} {Length: 1690} {TRANSSPLICED} {RNA1509_19913, RNA1509_42652, RNA1509_43735} {RNA1310_18465, RNA1509_19913, RNA1509_42652, RNA1509_43735} {RNA1509_19913, RNA1509_42652, RNA1509_43735, RNA815_7582} Mlig455_031007 {REF} {Length: 1871} {TRANSSPLICED} {RNA1509_42652} {RNA1310_18465} {RNA815_7582} |
|
| 7. | MligTC455_15621 | 381 | 7.94 | Mlig455_013242 | Neo: - Age: - Region-enriched R5: 1.802/0.02088 |
TRAPPC11 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_013242 {REF} {Length: 3943} {Pfam: Gryzun, putative trafficking through Golgi [PF07919.14, score=46.1]; Gryzun, putative Golgi trafficking [PF12742.9, score=44.1]} {Human: ENSG00000168538, TRAPPC11, trafficking protein particle complex 11, [Score=187, Expect=9e-51]} {Mouse: ENSMUSG00000038102, Trappc11, trafficking protein particle complex 11, [Score=186, Expect=2e-49]} {Smed: dd_Smed_v6_4563_0_2, dd_Smed_v6_4563_0_2, [Score=150, Expect=3e-38]} {RNA1509_6234} {RNA1310_1443.1} {RNA815_7720.1} |
| 8. | MligTC455_15622 | 731 | 15.22 | Mlig455_013217, Mlig455_013312 | Neo: - Age: - Region-enriched R5: 1.933/0.00483 |
TRAPPC11 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_013217 {REF} {Length: 4928} {TRANSSPLICED} {Pfam: Foie gras liver health family 1 [PF11817.10, score=168.6]; Gryzun, putative Golgi trafficking [PF12742.9, score=42.9]; Gryzun, putative trafficking through Golgi [PF07919.14, score=42.3]} {Human: ENSG00000168538, TRAPPC11, trafficking protein particle complex 11, [RH, Score=769, Expect=0.0]} {Mouse: ENSMUSG00000038102, Trappc11, trafficking protein particle complex 11, [RH, Score=777, Expect=0.0]} {Dmel: FBgn0035416, gry, gryzun, [RH, Score=402, Expect=2e-119]} {Celegans: WBGene00015173, trpp-11, TRansport Protein Particle, [RH, Score=214, Expect=1e-56]} {Smed: dd_Smed_v6_4563_0_4, dd_Smed_v6_4563_0_4, [RH, Score=681, Expect=0.0]} {RNA1509_6234} {RNA1310_1443.1} {RNA815_7720.1} Mlig455_013312 {REF} {Length: 4785} {TRANSSPLICED} {Pfam: Foie gras liver health family 1 [PF11817.10, score=168.5]; Gryzun, putative Golgi trafficking [PF12742.9, score=42.9]; Gryzun, putative trafficking through Golgi [PF07919.14, score=42.5]} {Human: ENSG00000168538, TRAPPC11, trafficking protein particle complex 11, [RH, Score=769, Expect=0.0]} {Mouse: ENSMUSG00000038102, Trappc11, trafficking protein particle complex 11, [RH, Score=776, Expect=0.0]} {Dmel: FBgn0035416, gry, gryzun, [RH, Score=402, Expect=2e-119]} {Celegans: WBGene00015173, trpp-11, TRansport Protein Particle, [RH, Score=214, Expect=1e-56]} {Smed: dd_Smed_v6_4563_0_4, dd_Smed_v6_4563_0_4, [RH, Score=681, Expect=0.0]} {RNA1509_6234} {RNA1310_1443.1} {RNA815_7720.1} |