Data search
Results for MligTC455_15925
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_15925 | 433 | 9.03 | Mlig455_000967 | Neo: - Age: Up-Down-Up, logFC(26M/2M)=1.067 Region-enriched R6: 2.167/0.03148 |
Mlig455_000967 {REF} {Length: 2362} {RNA1509_23315} {RNA1310_10319.1, RNA1509_23315} {RNA1509_23315, RNA815_4320.1} |
Cumulative graph for MligTC455_15925
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.084 | 3.615 | 0.12236 | 0.71624 | |
| RegionR2 | 0.242 | 3.615 | 0.74798 | 1.00000 | |
| RegionR3 | 0.853 | 3.615 | 0.32922 | 0.86715 | |
| RegionR4 | 1.805 | 3.615 | 0.02935 | 0.13376 | |
| RegionR5 | 1.138 | 3.615 | 0.15546 | 0.41293 | |
| RegionR6 | 2.167 | 3.615 | 0.00073 | 0.03148 | |
| RegionR7 | -0.724 | 3.615 | 0.97502 | 1.00000 | |
| RegionR8 | 0.602 | 3.615 | 0.63014 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 6.484 | 3.615 | 0.11853 | 0.84686 | |
| RegenerationR2 | 0.554 | 3.615 | 0.20924 | 0.65664 | |
| RegenerationR3 | 0.171 | 3.615 | 0.74927 | 0.96465 | |
| RegenerationR4 | 1.206 | 3.615 | 0.01891 | 0.21551 | |
| RegenerationR5 | 0.685 | 3.615 | 0.15082 | 0.56904 | |
| RegenerationR6 | 0.208 | 3.615 | 0.67355 | 0.91029 | |
| RegenerationBL | -3.213 | 3.615 | 0.00756 | 0.08489 | |
| RegenerationTP | 1.276 | 3.615 | 0.11574 | 0.52068 |
Genes with expression patterns similar to MligTC455_15925
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_15925 | 433 | 9.03 | Mlig455_000967 | Neo: - Age: Up-Down-Up, logFC(26M/2M)=1.067 Region-enriched R6: 2.167/0.03148 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_000967 {REF} {Length: 2362} {RNA1509_23315} {RNA1310_10319.1, RNA1509_23315} {RNA1509_23315, RNA815_4320.1} | |
| 2. | MligTC455_42720 | 246 | 5.13 | Mlig455_024695, Mlig455_024719 | Neo: - |
CHRNA3 | 1.772 | - | 0.801 | - | 0.971 | - | - | Mlig455_024695 {REF} {Length: 2853} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=153.6]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=71.5]} {Human: ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=188, Expect=7e-54]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=186, Expect=3e-53]} {Mouse: ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=187, Expect=8e-54]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=187, Expect=1e-53]; ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=185, Expect=2e-53]; ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=179, Expect=9e-51]} {Dmel: FBgn0000036, nAChRalpha1, nicotinic Acetylcholine Receptor alpha1, [Score=194, Expect=4e-56]} {Celegans: WBGene00000058, acr-19, AcetylCholine Receptor; Acetylcholine receptor (63.2 kD) (Acr-19), [Score=179, Expect=2e-50]} {Smed: dd_Smed_v6_2019_0_1, dd_Smed_v6_2019_0_1, [Score=314, Expect=2e-103]} {RNA1509_30530} {RNA1310_16567} {RNA815_2979.1} Mlig455_024719 {REF} {Length: 3783} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=153.5]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=80.8]} {Human: ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=192, Expect=8e-55]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=190, Expect=3e-54]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=193, Expect=2e-55]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=192, Expect=6e-55]; ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=187, Expect=1e-53]; ENSMUSG00000035594, Chrna5, cholinergic receptor, nicotinic, alpha polypeptide 5, [Score=187, Expect=2e-53]} {Dmel: FBgn0000036, nAChRalpha1, nicotinic Acetylcholine Receptor alpha1, [Score=196, Expect=6e-56]} {Celegans: WBGene00000058, acr-19, AcetylCholine Receptor; Acetylcholine receptor (63.2 kD) (Acr-19), [Score=179, Expect=5e-50]} {Smed: dd_Smed_v6_2019_0_1, dd_Smed_v6_2019_0_1, [Score=316, Expect=1e-103]} {RNA1509_30530} {RNA1310_16567, RNA1509_30530} {RNA1509_30530, RNA815_2979.1} |
| 3. | MligTC455_19127 | 65 | 1.35 | Mlig455_056017 | Neo: Irradiation Age: - Region-enriched R5: 3.064/0.02229 |
PHF10 | 1.699 | - | - | 0.739 | 0.960 | - | - | Mlig455_056017 {REF} {Length: 2163} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=53.6]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=26.6]} {Human: ENSG00000130024, PHF10, PHD finger protein 10, [RH, Score=113, Expect=1e-26]} {Mouse: ENSMUSG00000023883, Phf10, PHD finger protein 10, [RH, Score=112, Expect=3e-26]} {Dmel: FBgn0087008, e(y)3, enhancer of yellow 3, [RH, Score=96.7, Expect=9e-21]} {Celegans: WBGene00018013, phf-10, PHd Finger family, [RH, Score=105, Expect=1e-24]} {Smed: dd_Smed_v6_5804_0_1, dd_Smed_v6_5804_0_1, [RH, Score=137, Expect=6e-36]} {RNA1509_40742} {RNA1310_19455.1, RNA1509_40742} {RNA1509_40742, RNA815_22493} |
| 4. | MligTC455_51455 | 235 | 4.9 | Mlig455_020896 | Neo: - Age: - Region-enriched R2: 2.815/0.01995 |
INTS9 | 0.961 | - | - | - | 0.961 | - | - | Mlig455_020896 {REF} {Length: 2141} {TRANSSPLICED} {Pfam: Metallo-beta-lactamase superfamily domain [PF16661.7, score=46.8]; Beta-Casp domain [PF10996.10, score=24.8]} {Human: ENSG00000104299, INTS9, integrator complex subunit 9, [RH, Score=350, Expect=6e-111]} {Mouse: ENSMUSG00000021975, Ints9, integrator complex subunit 9, [RH, Score=341, Expect=2e-107]} {Dmel: FBgn0036570, IntS9, Integrator 9, [RH, Score=308, Expect=2e-95]} {Celegans: WBGene00017608, F19F10.12, [RH, Score=206, Expect=9e-58]} {Smed: dd_Smed_v6_5262_0_1, dd_Smed_v6_5262_0_1, [RH, Score=317, Expect=5e-99]} {RNA1509_13901} {RNA1310_11245.1} {RNA815_21239} |
| 5. | MligTC455_26726 | 926 | 19.29 | Mlig455_039960, Mlig455_039973 | Neo: Int S/G2/M Age: Up-Down-Up Region-enriched R5: 1.156/0.00929 |
NUP205 | 0.96 | - | - | - | 0.960 | - | - | Mlig455_039960 {REF} {Length: 7090} {TRANSSPLICED} {Pfam: Nuclear pore complex scaffold, nucleoporins 186/192/205 [PF11894.10, score=574.1]} {Human: ENSG00000155561, NUP205, nucleoporin 205, [RH, Score=639, Expect=0.0]} {Mouse: ENSMUSG00000038759, Nup205, nucleoporin 205, [RH, Score=623, Expect=0.0]} {Dmel: FBgn0031078, Nup205, Nucleoporin 205kD, [RH, Score=293, Expect=3e-79]} {Celegans: WBGene00003789, npp-3, Nuclear Pore complex Protein, [RH, Score=91.7, Expect=6e-18]} {Smed: dd_Smed_v6_3533_0_1, dd_Smed_v6_3533_0_1, [RH, Score=404, Expect=1e-113]} {RNA1509_7576} {RNA1310_395.1} {RNA815_13561} Mlig455_039973 {REF} {Length: 7093} {TRANSSPLICED} {Pfam: Nuclear pore complex scaffold, nucleoporins 186/192/205 [PF11894.10, score=567.0]} {Human: ENSG00000155561, NUP205, nucleoporin 205, [Score=635, Expect=0.0]} {Mouse: ENSMUSG00000038759, Nup205, nucleoporin 205, [RH, Score=619, Expect=0.0]} {Dmel: FBgn0031078, Nup205, Nucleoporin 205kD, [RH, Score=290, Expect=3e-78]} {Celegans: WBGene00003789, npp-3, Nuclear Pore complex Protein, [RH, Score=91.3, Expect=6e-18]} {Smed: dd_Smed_v6_3533_0_1, dd_Smed_v6_3533_0_1, [RH, Score=405, Expect=5e-114]} {RNA1509_30395, RNA1509_49926, RNA1509_7576} {RNA1310_395.1, RNA1509_30395, RNA1509_49926} {RNA1509_30395, RNA1509_49926, RNA815_13561} |
| 6. | MligTC455_27280 | 56 | 1.17 | Mlig455_060800 | Neo: - |
ANKRD44 | 0.955 | 0.955 | - | - | - | - | - | Mlig455_060800 {REF} {Length: 4271} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=114.5]; Ankyrin repeats (many copies) [PF13857.8, score=86.4]; Ankyrin repeats (many copies) [PF13637.8, score=83.9]; Ankyrin repeat [PF00023.32, score=79.0]; Ankyrin repeat [PF13606.8, score=66.4]; Caspase domain [PF00656.24, score=66.2]} {Human: ENSG00000065413, ANKRD44, ankyrin repeat domain 44, [Score=84.7, Expect=5e-16]; ENSG00000138794, CASP6, caspase 6, [Score=82.0, Expect=3e-16]; ENSG00000206560, ANKRD28, ankyrin repeat domain 28, [Score=80.9, Expect=8e-15]; ENSG00000164305, CASP3, caspase 3, [Score=80.5, Expect=7e-16]} {Mouse: ENSMUSG00000052331, Ankrd44, ankyrin repeat domain 44, [Score=85.9, Expect=2e-16]} {Dmel: FBgn0010501, Dcp-1, Death caspase-1, [Score=75.1, Expect=4e-14]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=74.7, Expect=2e-13]} {Smed: dd_Smed_v6_4986_0_1, dd_Smed_v6_4986_0_1, [Score=83.6, Expect=2e-17]} {RNA1509_49818} {RNA1310_3965, RNA1509_49818} {RNA1509_49818, RNA815_66.1} |
| 7. | MligTC455_39133 | 322 | 6.7 | Mlig455_036429 | Neo: - Age: Down-Up-Up |
COPS6 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_036429 {REF} {Length: 2651} {TRANSSPLICED} {Pfam: Maintenance of mitochondrial structure and function [PF13012.8, score=85.9]; JAB1/Mov34/MPN/PAD-1 ubiquitin protease [PF01398.23, score=43.1]} {Human: ENSG00000168090, COPS6, COP9 signalosome subunit 6, [RH, Score=243, Expect=6e-78]} {Mouse: ENSMUSG00000019494, Cops6, COP9 signalosome subunit 6, [RH, Score=239, Expect=1e-76]} {Dmel: FBgn0028837, CSN6, COP9 signalosome subunit 6, [RH, Score=233, Expect=3e-74]} {Celegans: WBGene00004464, rpn-8, Proteasome Regulatory Particle, Non-ATPase-like, [Score=89.0, Expect=1e-19]} {Smed: dd_Smed_v6_4168_0_1, dd_Smed_v6_4168_0_1, [RH, Score=131, Expect=1e-35]} {RNA1509_12499} {RNA1310_25406.1, RNA1509_12499} {RNA1509_12499, RNA815_12821.1} |
| 8. | MligTC455_47491 | 302 | 6.29 | Mlig455_030531 | Neo: Irradiation Age: Up-Down-Up, logFC(26M/2M)=0.489 Region-specific R5: 2.664 Region-enriched R5: 1.755/0.00006 |
TUT7 | 0.954 | - | - | - | 0.954 | - | - | Mlig455_030531 {REF} {Length: 3483} {TRANSSPLICED} {Pfam: TUTase nucleotidyltransferase domain [PF19088.2, score=36.1]} {Human: ENSG00000083223, TUT7, terminal uridylyl transferase 7, [Score=53.1, Expect=2e-06]} {RNA1509_22764} {RNA1310_6443.1} {RNA815_24098} |
| 9. | MligTC455_42930 | 454 | 9.46 | Mlig455_021401 | Neo: - Age: Down-Up-Up |
0.953 | - | - | - | 0.953 | - | - | Mlig455_021401 {REF} {Length: 2364} {Pfam: Staphylococcal nuclease homologue [PF00565.19, score=54.6]} {Smed: dd_Smed_v6_2248_0_1, dd_Smed_v6_2248_0_1, [RH, Score=90.1, Expect=5e-23]} {RNA1509_35535} {RNA1310_33600, RNA1509_35535} {RNA1509_35535, RNA815_19822} | |
| 10. | MligTC455_17961 | 63 | 1.32 | Mlig455_021046, Mlig455_021081 | Neo: - Age: Down-Up-Down |
0.95 | - | 0.950 | - | - | - | - | Mlig455_021046 {REF} {Length: 2175} {Pfam: Family of unknown function (DUF5856) [PF19174.2, score=20.6]} {RNA1310_45857} {RNA815_23318} Mlig455_021081 {REF} {Length: 2733} {Pfam: SH3 domain [PF17902.3, score=26.9]; Plectin repeat [PF00681.22, score=22.8]; Occludin homology domain [PF07303.15, score=22.8]} {Smed: dd_Smed_v6_16329_0_1, dd_Smed_v6_16329_0_1, [Score=56.6, Expect=3e-08]} {RNA1509_53557} {RNA1310_11053.2} {RNA815_24024.1} |
|
| 11. | MligTC455_34501 | 66 | 1.37 | Mlig455_061338 | Neo: - Age: - |
PARG | 0.95 | - | - | - | - | - | 0.950 | Mlig455_061338 {REF} {Length: 5848} {TRANSSPLICED} {Pfam: Poly (ADP-ribose) glycohydrolase (PARG) [PF05028.16, score=233.7]} {Human: ENSG00000227345, PARG, poly(ADP-ribose) glycohydrolase, [Score=113, Expect=5e-25]} {Mouse: ENSMUSG00000021911, Parg, poly (ADP-ribose) glycohydrolase, [Score=112, Expect=9e-25]} {Dmel: FBgn0023216, Parg, Poly(ADP-ribose) glycohydrolase, [Score=126, Expect=1e-29]} {Celegans: WBGene00004051, parg-1, Poly(ADP-ribose) glycohydrolase 1, [Score=71.6, Expect=1e-12]} {Smed: dd_Smed_v6_8617_0_1, dd_Smed_v6_8617_0_1, [Score=90.1, Expect=1e-18]} {RNA1509_7765} {RNA1310_1520.1, RNA1509_7765} {RNA1509_7765, RNA815_6107} |
| 12. | MligTC455_43952 | 230 | 4.79 | Mlig455_068335 | Neo: Int S/G2/M Age: - |
NEMP1 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_068335 {REF} {Length: 1736} {Pfam: NEMP family [PF10225.11, score=60.7]} {Human: ENSG00000166881, NEMP1, nuclear envelope integral membrane protein 1, [Score=66.6, Expect=1e-12]} {Mouse: ENSMUSG00000043015, Nemp2, nuclear envelope integral membrane protein 2, [Score=55.1, Expect=9e-09]} {RNA1509_42654} {RNA1310_10680} {RNA815_32705} |