Data search


search
Exact
Search

Results for MligTC455_17961

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_17961 63 1.32 Mlig455_021046, Mlig455_021081

Neo: -

Age: Down-Up-Down

Mlig455_021046 {REF} {Length: 2175} {Pfam: Family of unknown function (DUF5856) [PF19174.2, score=20.6]} {RNA1310_45857} {RNA815_23318}

Mlig455_021081 {REF} {Length: 2733} {Pfam: SH3 domain [PF17902.3, score=26.9]; Plectin repeat [PF00681.22, score=22.8]; Occludin homology domain [PF07303.15, score=22.8]} {Smed: dd_Smed_v6_16329_0_1, dd_Smed_v6_16329_0_1, [Score=56.6, Expect=3e-08]} {RNA1509_53557} {RNA1310_11053.2} {RNA815_24024.1}

Cumulative graph for MligTC455_17961

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.065 1.522 0.99974 1.00000
RegionR2 0.916 1.522 0.51465 0.89120
RegionR3 1.197 1.522 0.36547 0.89992
RegionR4 2.799 1.522 0.08863 0.28350
RegionR5 -1.091 1.522 0.88555 1.00000
RegionR6 2.234 1.522 0.11342 0.61534
RegionR7 -3 1.522 0.99992 1.00000
RegionR8 -2.99 1.522 0.99986 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -2.003 1.522 0.99990 1.00000
RegenerationR2 0.139 1.522 0.89042 1.00000
RegenerationR3 -0.002 1.522 0.93619 1.00000
RegenerationR4 -1.985 1.522 0.11302 0.51509
RegenerationR5 1.508 1.522 0.26105 0.69234
RegenerationR6 -0.802 1.522 0.46625 0.78204
RegenerationBL -2.045 1.522 0.99962 1.00000
RegenerationTP 3.172 1.522 0.26405 0.71206


Genes with expression patterns similar to MligTC455_17961

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_17961 63 1.32 Mlig455_021046, Mlig455_021081

Neo: -

Age: Down-Up-Down

5 1.000 1.000 1.000 - 1.000 1.000

Mlig455_021046 {REF} {Length: 2175} {Pfam: Family of unknown function (DUF5856) [PF19174.2, score=20.6]} {RNA1310_45857} {RNA815_23318}

Mlig455_021081 {REF} {Length: 2733} {Pfam: SH3 domain [PF17902.3, score=26.9]; Plectin repeat [PF00681.22, score=22.8]; Occludin homology domain [PF07303.15, score=22.8]} {Smed: dd_Smed_v6_16329_0_1, dd_Smed_v6_16329_0_1, [Score=56.6, Expect=3e-08]} {RNA1509_53557} {RNA1310_11053.2} {RNA815_24024.1}
2. MligTC455_50067 66 1.38 Mlig455_053514

Neo: -

Age: logFC(26M/2M)=-0.733

1.873 0.904 0.969 - - - - Mlig455_053514 {REF} {Length: 2509} {RNA1509_46424} {RNA1310_8850} {RNA815_3382.1}
3. MligTC455_47109 27 0.55 Mlig455_053890

Neo: -

Age: -

1.739 - 0.966 - - 0.773 - Mlig455_053890 {REF} {Length: 579} {NoTransDecoderORF} {RNA1509_22152} {RNA1310_48631} {RNA815_40776}
4. MligTC455_47724 33 0.69 Mlig455_019262

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.666

ANK2 0.978 - - - - 0.978 - Mlig455_019262 {REF} {Length: 2041} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=141.5]; Ankyrin repeats (many copies) [PF13637.8, score=111.3]; Ankyrin repeat [PF13606.8, score=94.1]; Ankyrin repeat [PF00023.32, score=92.6]; Ankyrin repeats (many copies) [PF13857.8, score=88.8]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=97.4, Expect=1e-20]; ENSG00000151150, ANK3, ankyrin 3, [Score=95.5, Expect=9e-20]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=96.3, Expect=3e-20]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=95.9, Expect=4e-20]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=82.8, Expect=2e-16]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=83.6, Expect=1e-16]} {Smed: dd_Smed_v6_10835_0_1, dd_Smed_v6_10835_0_1, [Score=83.2, Expect=1e-16]} {RNA1509_10844} {RNA1310_6519} {RNA815_7473}
5. MligTC455_48708 20 0.42 Mlig455_067702

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=1.312

SLC16A12 0.977 - - - - 0.977 - Mlig455_067702 {REF} {Length: 1799} {Pfam: Major Facilitator Superfamily [PF07690.18, score=92.0]} {Human: ENSG00000152779, SLC16A12, solute carrier family 16 member 12, [Score=115, Expect=2e-27]} {Mouse: ENSMUSG00000009378, Slc16a12, solute carrier family 16 (monocarboxylic acid transporters), member 12, [Score=116, Expect=7e-28]} {Dmel: FBgn0033657, Sln, Silnoon, [Score=103, Expect=3e-23]} {Celegans: WBGene00015676, mct-6, MonoCarboxylate Transporter family, [Score=68.6, Expect=3e-12]} {Smed: dd_Smed_v6_27363_0_1, dd_Smed_v6_27363_0_1, [Score=53.1, Expect=1e-07]} {RNA1509_51838} {RNA1310_16175} {RNA815_10056}
6. MligTC455_17774 19 0.4 Mlig455_019109

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=1.701

0.969 - - - - 0.969 - Mlig455_019109 {REF} {Length: 1472} {Pfam: CCDC144C protein coiled-coil region [PF14915.8, score=20.5]; Cholesterol uptake porter CUP1 of Mce4, putative [PF11887.10, score=18.5]} {RNA1509_45238} {RNA1310_36939, RNA1509_45238} {RNA1509_45238, RNA815_17399}
7. MligTC455_23849 24 0.49 Mlig455_042376

Neo: -

Age: -

0.967 - - - - 0.967 - Mlig455_042376 {REF} {Length: 1637} {RNA1310_117298}
8. MligTC455_01160 7 0.14 Mlig455_004789

Neo: -

Age: -

0.962 - 0.962 - - - - Mlig455_004789 {REF} {Length: 311} {NoTransDecoderORF} {RNA1509_34209} {RNA1310_24263} {RNA815_57701}
9. MligTC455_37526 14 0.29 Mlig455_053515

Neo: -

Age: -

0.962 - 0.962 - - - - Mlig455_053515 {REF} {Length: 561} {NoTransDecoderORF} {RNA1310_141986}
10. MligTC455_36357 146 3.04 Mlig455_052875

Neo: -

Age: Up-Down-Up

ANOS1 0.961 - - - - 0.961 - Mlig455_052875 {REF} {Length: 4790} {Pfam: Fibronectin type III domain [PF00041.23, score=50.2]; WAP-type (Whey Acidic Protein) 'four-disulfide core' [PF00095.23, score=23.5]} {Human: ENSG00000011201, ANOS1, anosmin 1, [Score=149, Expect=3e-37]} {Mouse: ENSMUSG00000024246, Thumpd2, THUMP domain containing 2, [Score=57.4, Expect=3e-08]} {Smed: dd_Smed_v6_6746_0_1, dd_Smed_v6_6746_0_1, [Score=188, Expect=2e-51]} {RNA1509_15282} {RNA1310_3612.1} {RNA815_4193}
11. MligTC455_45565 35 0.73 Mlig455_017877

Neo: -

Age: -

Region-enriched R6: 7.343/0.00026

ARF3 0.961 - 0.961 - - - - Mlig455_017877 {REF} {Length: 924} {Pfam: ADP-ribosylation factor family [PF00025.23, score=210.6]; Ras family [PF00071.24, score=57.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=55.4]; Signal recognition particle receptor beta subunit [PF09439.12, score=40.6]; Gtr1/RagA G protein conserved region [PF04670.14, score=32.9]; G-protein alpha subunit [PF00503.22, score=32.2]; 50S ribosome-binding GTPase [PF01926.25, score=21.2]} {Human: ENSG00000134287, ARF3, ADP ribosylation factor 3, [Score=214, Expect=3e-71]; ENSG00000143761, ARF1, ADP ribosylation factor 1, [Score=213, Expect=1e-70]; ENSG00000004059, ARF5, ADP ribosylation factor 5, [Score=204, Expect=5e-67]} {Mouse: ENSMUSG00000051853, Arf3, ADP-ribosylation factor 3, [Score=214, Expect=2e-71]; ENSMUSG00000048076, Arf1, ADP-ribosylation factor 1, [Score=213, Expect=7e-71]; ENSMUSG00000062421, Arf2, ADP-ribosylation factor 2, [Score=213, Expect=5e-71]; ENSMUSG00000020440, Arf5, ADP-ribosylation factor 5, [Score=204, Expect=3e-67]} {Dmel: FBgn0010348, Arf79F, ADP ribosylation factor at 79F, [Score=216, Expect=2e-72]} {Celegans: WBGene00000183, arf-3, ADP-Ribosylation Factor related; ADP-ribosylation factor related (20.5 kD) (Arf-3), [Score=213, Expect=4e-71]} {Smed: dd_Smed_v6_3383_0_1, dd_Smed_v6_3383_0_1, [RH, Score=227, Expect=1e-76]} {RNA1509_57358} {RNA1310_37939} {RNA815_20725}
12. MligTC455_46358 94 1.95 Mlig455_066966

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.840

0.957 - - - - 0.957 - Mlig455_066966 {REF} {Length: 3174} {Pfam: Innexin [PF00876.20, score=311.0]} {Dmel: FBgn0027108, Inx2, Innexin 2, [Score=87.8, Expect=1e-18]} {Celegans: WBGene00006749, unc-9, Innexin unc-9, [Score=193, Expect=6e-57]} {Smed: dd_Smed_v6_8019_0_1, dd_Smed_v6_8019_0_1, [Score=255, Expect=7e-80]} {RNA1509_46847} {RNA1310_9874} {RNA815_3526}
13. MligTC455_14923 64 1.33 Mlig455_019406, Mlig455_019626, Mlig455_059067

Neo: -

Age: -

MSX1 0.954 - 0.954 - - - -

Mlig455_019406 {REF} {Length: 2069} {Pfam: Homeodomain [PF00046.31, score=75.8]} {Human: ENSG00000163132, MSX1, msh homeobox 1, [RH, Score=132, Expect=7e-37]; ENSG00000120149, MSX2, msh homeobox 2, [RH, Score=130, Expect=1e-36]} {Mouse: ENSMUSG00000048450, Msx1, msh homeobox 1, [RH, Score=132, Expect=6e-37]; ENSMUSG00000021469, Msx2, msh homeobox 2, [RH, Score=130, Expect=9e-37]; ENSMUSG00000025469, Msx3, msh homeobox 3, [RH, Score=129, Expect=5e-37]} {Dmel: FBgn0000492, Dr, Drop, [RH, Score=137, Expect=1e-37]} {Celegans: WBGene00006881, vab-15, Homeobox protein vab-15, [RH, Score=128, Expect=2e-36]} {Smed: dd_Smed_v6_16524_0_1, dd_Smed_v6_16524_0_1, [RH, Score=137, Expect=4e-40]} {RNA1310_58602} {RNA815_49934}

Mlig455_019626 {REF} {Length: 2113} {Pfam: Homeodomain [PF00046.31, score=77.4]} {Human: ENSG00000163132, MSX1, msh homeobox 1, [RH, Score=133, Expect=2e-37]; ENSG00000120149, MSX2, msh homeobox 2, [RH, Score=130, Expect=8e-37]} {Mouse: ENSMUSG00000048450, Msx1, msh homeobox 1, [RH, Score=132, Expect=3e-37]; ENSMUSG00000021469, Msx2, msh homeobox 2, [RH, Score=130, Expect=7e-37]; ENSMUSG00000025469, Msx3, msh homeobox 3, [RH, Score=130, Expect=7e-38]} {Dmel: FBgn0000492, Dr, Drop, [RH, Score=136, Expect=1e-37]} {Celegans: WBGene00006881, vab-15, Homeobox protein vab-15, [RH, Score=126, Expect=3e-36]} {Smed: dd_Smed_v6_16524_0_1, dd_Smed_v6_16524_0_1, [RH, Score=135, Expect=8e-40]} {RNA1310_58602} {RNA815_49934}

Mlig455_059067 {REF} {Length: 2124} {Pfam: Homeodomain [PF00046.31, score=77.2]} {Human: ENSG00000163132, MSX1, msh homeobox 1, [RH, Score=132, Expect=7e-37]; ENSG00000120149, MSX2, msh homeobox 2, [RH, Score=130, Expect=1e-36]} {Mouse: ENSMUSG00000048450, Msx1, msh homeobox 1, [RH, Score=132, Expect=5e-37]; ENSMUSG00000021469, Msx2, msh homeobox 2, [RH, Score=130, Expect=9e-37]; ENSMUSG00000025469, Msx3, msh homeobox 3, [RH, Score=129, Expect=4e-37]} {Dmel: FBgn0000492, Dr, Drop, [RH, Score=137, Expect=1e-37]} {Celegans: WBGene00006881, vab-15, Homeobox protein vab-15, [RH, Score=127, Expect=2e-36]} {Smed: dd_Smed_v6_16524_0_1, dd_Smed_v6_16524_0_1, [RH, Score=137, Expect=4e-40]} {RNA1310_58602} {RNA815_49934}
14. MligTC455_36190 239 4.99 Mlig455_011419

Neo: -

Age: -

Region-enriched R6: 8.371/0.00000

GLIPR1 0.951 - 0.951 - - - - Mlig455_011419 {REF} {Length: 1624} {Pfam: Cysteine-rich secretory protein family [PF00188.28, score=61.8]} {Human: ENSG00000139278, GLIPR1, GLI pathogenesis related 1, [Score=76.6, Expect=3e-15]} {Mouse: ENSMUSG00000078949, R3hdml, R3H domain containing-like, [Score=73.2, Expect=3e-14]; ENSMUSG00000024011, Pi16, peptidase inhibitor 16, [Score=70.9, Expect=6e-13]} {Dmel: FBgn0038126, CG8483, [Score=72.0, Expect=1e-13]} {Celegans: WBGene00015246, scl-23, SCP-Like extracellular protein, [RH, Score=58.5, Expect=2e-09]} {Smed: dd_Smed_v6_6756_0_1, dd_Smed_v6_6756_0_1, [Score=96.3, Expect=3e-23]} {RNA1509_16373} {RNA1310_19845.1} {RNA815_8030}
15. MligTC455_15925 433 9.03 Mlig455_000967

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=1.067

Region-enriched R6: 2.167/0.03148

0.95 - 0.950 - - - - Mlig455_000967 {REF} {Length: 2362} {RNA1509_23315} {RNA1310_10319.1, RNA1509_23315} {RNA1509_23315, RNA815_4320.1}
16. MligTC455_29090 29 0.61 Mlig455_007617, Mlig455_063238, Mlig455_066727, Mlig455_066741

Neo: -

Age: Down-Up-Down

0.95 - 0.950 - - - -

Mlig455_007617 {REF} {Length: 204} {NoTransDecoderORF} {RNA1310_16838} {RNA815_16228}

Mlig455_063238 {REF} {Length: 1745} {RNA1310_16838} {RNA815_16228}

Mlig455_066727 {REF} {Length: 1604} {RNA1310_16838} {RNA815_16228}

Mlig455_066741 {REF} {Length: 1298} {RNA1310_16838} {RNA815_16228}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA