Data search
Results for MligTC455_16084
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_16084 | 669 | 13.94 | Mlig455_064829 | Neo: - Age: - Region-enriched R5: 1.583/0.01422 |
ERGIC3 | Mlig455_064829 {REF} {Length: 11460} {TRANSSPLICED} {Pfam: Endoplasmic reticulum vesicle transporter [PF07970.14, score=268.9]; Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) [PF13850.8, score=99.6]} {Human: ENSG00000125991, ERGIC3, ERGIC and golgi 3, [RH, Score=385, Expect=3e-132]} {Mouse: ENSMUSG00000005881, Ergic3, ERGIC and golgi 3, [RH, Score=383, Expect=2e-131]} {Dmel: FBgn0036489, CG7011, [RH, Score=301, Expect=5e-100]} {Celegans: WBGene00010725, erv-46, Yeast ERV (ER to Golgi transport Vesicle protein) homolog, [RH, Score=314, Expect=6e-105]} {Smed: dd_Smed_v6_8239_0_1, dd_Smed_v6_8239_0_1, [RH, Score=399, Expect=8e-138]} {RNA1509_12548, RNA1509_24446, RNA1509_27360, RNA1509_46735} {RNA1310_19725, RNA1509_12548, RNA1509_24446, RNA1509_27360, RNA1509_46735} {RNA1509_12548, RNA1509_24446, RNA1509_27360, RNA1509_46735, RNA815_9609} |
Cumulative graph for MligTC455_16084
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -7.83 | 4.206 | 0.00777 | 0.26410 | |
| RegionR2 | 1.065 | 4.206 | 0.16835 | 0.51345 | |
| RegionR3 | 1.432 | 4.206 | 0.01248 | 0.17688 | |
| RegionR4 | 0.854 | 4.206 | 0.27286 | 0.57916 | |
| RegionR5 | 1.583 | 4.206 | 0.00153 | 0.01422 | |
| RegionR6 | 1.204 | 4.206 | 0.05988 | 0.45962 | |
| RegionR7 | 1.665 | 4.206 | 0.00879 | 0.15910 | |
| RegionR8 | 0.027 | 4.206 | 0.84267 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 6.487 | 4.206 | 0.15858 | 0.90183 | |
| RegenerationR2 | -0.052 | 4.206 | 0.87929 | 1.00000 | |
| RegenerationR3 | -0.476 | 4.206 | 0.18824 | 0.62350 | |
| RegenerationR4 | -0.397 | 4.206 | 0.30046 | 0.74219 | |
| RegenerationR5 | -0.086 | 4.206 | 0.78892 | 0.98485 | |
| RegenerationR6 | -0.286 | 4.206 | 0.44946 | 0.77023 | |
| RegenerationBL | 0.153 | 4.206 | 0.75353 | 1.00000 | |
| RegenerationTP | -0.975 | 4.206 | 0.12510 | 0.53552 |
Genes with expression patterns similar to MligTC455_16084
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_16084 | 669 | 13.94 | Mlig455_064829 | Neo: - Age: - Region-enriched R5: 1.583/0.01422 |
ERGIC3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_064829 {REF} {Length: 11460} {TRANSSPLICED} {Pfam: Endoplasmic reticulum vesicle transporter [PF07970.14, score=268.9]; Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) [PF13850.8, score=99.6]} {Human: ENSG00000125991, ERGIC3, ERGIC and golgi 3, [RH, Score=385, Expect=3e-132]} {Mouse: ENSMUSG00000005881, Ergic3, ERGIC and golgi 3, [RH, Score=383, Expect=2e-131]} {Dmel: FBgn0036489, CG7011, [RH, Score=301, Expect=5e-100]} {Celegans: WBGene00010725, erv-46, Yeast ERV (ER to Golgi transport Vesicle protein) homolog, [RH, Score=314, Expect=6e-105]} {Smed: dd_Smed_v6_8239_0_1, dd_Smed_v6_8239_0_1, [RH, Score=399, Expect=8e-138]} {RNA1509_12548, RNA1509_24446, RNA1509_27360, RNA1509_46735} {RNA1310_19725, RNA1509_12548, RNA1509_24446, RNA1509_27360, RNA1509_46735} {RNA1509_12548, RNA1509_24446, RNA1509_27360, RNA1509_46735, RNA815_9609} |
| 2. | MligTC455_31540 | 586 | 12.21 | Mlig455_009199 | Neo: Int S/G2/M Age: Up-Down-Down |
CPSF1 | 1.698 | 0.747 | - | - | - | - | 0.951 | Mlig455_009199 {REF} {Length: 7327} {TRANSSPLICED} {Pfam: CPSF A subunit region [PF03178.17, score=217.3]; Mono-functional DNA-alkylating methyl methanesulfonate N-term [PF10433.11, score=80.2]} {Human: ENSG00000071894, CPSF1, cleavage and polyadenylation specific factor 1, [RH, Score=567, Expect=4e-173]; ENSG00000285049, CPSF1, cleavage and polyadenylation specific factor 1, [RH, Score=567, Expect=4e-173]} {Mouse: ENSMUSG00000034022, Cpsf1, cleavage and polyadenylation specific factor 1, [RH, Score=570, Expect=3e-174]} {Dmel: FBgn0024698, Cpsf160, Cleavage and polyadenylation specificity factor 160, [RH, Score=473, Expect=8e-140]} {Celegans: WBGene00022301, cpsf-1, Probable cleavage and polyadenylation specificity factor subunit 1, [RH, Score=364, Expect=5e-103]} {Smed: dd_Smed_v6_8644_0_1, dd_Smed_v6_8644_0_1, [RH, Score=468, Expect=1e-137]} {RNA1509_23949, RNA1509_5909} {RNA1310_503.1, RNA1509_23949, RNA1509_5909} {RNA1509_23949, RNA1509_5909, RNA815_575.1} |
| 3. | MligTC455_44495 | 322 | 6.7 | Mlig455_039415 | Neo: - Age: - |
STAT4 | 0.961 | - | - | - | - | - | 0.961 | Mlig455_039415 {REF} {Length: 2741} {TRANSSPLICED} {Pfam: SH2 domain [PF00017.26, score=23.5]} {Human: ENSG00000138378, STAT4, signal transducer and activator of transcription 4, [RH, Score=70.5, Expect=6e-12]} {Mouse: ENSMUSG00000062939, Stat4, signal transducer and activator of transcription 4, [RH, Score=76.3, Expect=7e-14]} {RNA1509_16743, RNA1509_17436} {RNA1310_6522.1, RNA1509_16743, RNA1509_17436} {RNA1509_16743, RNA1509_17436, RNA815_3533} |
| 4. | MligTC455_15446 | 84 | 1.76 | Mlig455_049757 | Neo: Irradiation Age: logFC(26M/2M)=0.275 Region-enriched R5: 3.436/0.00161 |
ESRRG | 0.959 | - | - | - | - | 0.959 | - | Mlig455_049757 {REF} {Length: 2879} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=80.9]} {Human: ENSG00000196482, ESRRG, estrogen related receptor gamma, [Score=85.1, Expect=4e-19]; ENSG00000116833, NR5A2, nuclear receptor subfamily 5 group A member 2, [Score=83.2, Expect=2e-18]; ENSG00000119715, ESRRB, estrogen related receptor beta, [Score=82.8, Expect=3e-18]; ENSG00000173153, ESRRA, estrogen related receptor alpha, [Score=82.8, Expect=2e-18]; ENSG00000175745, NR2F1, nuclear receptor subfamily 2 group F member 1, [Score=82.4, Expect=2e-18]; ENSG00000185551, NR2F2, nuclear receptor subfamily 2 group F member 2, [Score=82.0, Expect=4e-18]} {Mouse: ENSMUSG00000026610, Esrrg, estrogen-related receptor gamma, [Score=85.1, Expect=3e-19]; ENSMUSG00000024955, Esrra, estrogen related receptor, alpha, [Score=83.2, Expect=1e-18]; ENSMUSG00000069171, Nr2f1, nuclear receptor subfamily 2, group F, member 1, [Score=82.4, Expect=2e-18]; ENSMUSG00000030551, Nr2f2, nuclear receptor subfamily 2, group F, member 2, [Score=82.0, Expect=3e-18]; ENSMUSG00000021255, Esrrb, estrogen related receptor, beta, [Score=82.0, Expect=4e-18]; ENSMUSG00000026398, Nr5a2, nuclear receptor subfamily 5, group A, member 2, [Score=81.6, Expect=5e-18]; ENSMUSG00000023034, Nr4a1, nuclear receptor subfamily 4, group A, member 1, [Score=81.6, Expect=6e-18]} {Dmel: FBgn0035849, ERR, estrogen-related receptor, [Score=84.3, Expect=4e-19]} {Celegans: WBGene00003678, nhr-88, Nuclear Hormone Receptor family, [Score=77.4, Expect=1e-17]} {Smed: dd_Smed_v6_33286_0_2, dd_Smed_v6_33286_0_2, [Score=88.6, Expect=2e-21]} {RNA1509_22231, RNA1509_56454} {RNA1310_7459.2, RNA1509_56454} {RNA1509_56454, RNA815_5691.1} |
| 5. | MligTC455_14017 | 669 | 13.94 | Mlig455_011296, Mlig455_011386 | Neo: Irradiation Age: - Region-enriched R5: 1.719/0.02143 |
0.958 | - | - | - | - | 0.958 | - | Mlig455_011296 {REF} {Length: 3314} {TRANSSPLICED} {Pfam: Glycine-rich domain-containing protein-like [PF07173.14, score=129.4]} {Celegans: WBGene00017980, F32B5.7, [RH, Score=247, Expect=2e-70]} {Smed: dd_Smed_v6_5132_0_1, dd_Smed_v6_5132_0_1, [Score=293, Expect=1e-86]} {RNA1509_18421} {RNA1310_3961.1, RNA1509_18421} {RNA1509_18421, RNA815_3416} Mlig455_011386 {REF} {Length: 3653} {TRANSSPLICED} {Pfam: Glycine-rich domain-containing protein-like [PF07173.14, score=129.6]} {Celegans: WBGene00017980, F32B5.7, [RH, Score=252, Expect=4e-72]} {Smed: dd_Smed_v6_5132_0_1, dd_Smed_v6_5132_0_1, [Score=295, Expect=3e-87]} {RNA1509_18421} {RNA1310_3961.1} {RNA815_3416} |
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