Data search
Results for MligTC455_44495
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_44495 | 322 | 6.70 | Mlig455_039415 | Neo: - Age: - |
STAT4 | Mlig455_039415 {REF} {Length: 2741} {TRANSSPLICED} {Pfam: SH2 domain [PF00017.26, score=23.5]} {Human: ENSG00000138378, STAT4, signal transducer and activator of transcription 4, [RH, Score=70.5, Expect=6e-12]} {Mouse: ENSMUSG00000062939, Stat4, signal transducer and activator of transcription 4, [RH, Score=76.3, Expect=7e-14]} {RNA1509_16743, RNA1509_17436} {RNA1310_6522.1, RNA1509_16743, RNA1509_17436} {RNA1509_16743, RNA1509_17436, RNA815_3533} |
Cumulative graph for MligTC455_44495
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.086 | 3.241 | 0.32977 | 0.97627 | |
| RegionR2 | 1.668 | 3.241 | 0.00586 | 0.07129 | |
| RegionR3 | 0.254 | 3.241 | 0.54803 | 1.00000 | |
| RegionR4 | -1.84 | 3.241 | 0.00246 | 0.02091 | |
| RegionR5 | 0.253 | 3.241 | 0.51212 | 0.87521 | |
| RegionR6 | -0.214 | 3.241 | 0.64988 | 1.00000 | |
| RegionR7 | 0.486 | 3.241 | 0.39733 | 1.00000 | |
| RegionR8 | 0.478 | 3.241 | 0.52979 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -3.733 | 3.241 | 0.53660 | 1.00000 | |
| RegenerationR2 | -0.619 | 3.241 | 0.26958 | 0.71563 | |
| RegenerationR3 | 1.033 | 3.241 | 0.06474 | 0.42886 | |
| RegenerationR4 | 0.396 | 3.241 | 0.52053 | 0.87955 | |
| RegenerationR5 | 0.07 | 3.241 | 0.85708 | 1.00000 | |
| RegenerationR6 | -2.885 | 3.241 | 0.00500 | 0.08538 | |
| RegenerationBL | -0.089 | 3.241 | 0.92311 | 1.00000 | |
| RegenerationTP | -1.049 | 3.241 | 0.27607 | 0.72380 |
Genes with expression patterns similar to MligTC455_44495
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_44495 | 322 | 6.7 | Mlig455_039415 | Neo: - Age: - |
STAT4 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_039415 {REF} {Length: 2741} {TRANSSPLICED} {Pfam: SH2 domain [PF00017.26, score=23.5]} {Human: ENSG00000138378, STAT4, signal transducer and activator of transcription 4, [RH, Score=70.5, Expect=6e-12]} {Mouse: ENSMUSG00000062939, Stat4, signal transducer and activator of transcription 4, [RH, Score=76.3, Expect=7e-14]} {RNA1509_16743, RNA1509_17436} {RNA1310_6522.1, RNA1509_16743, RNA1509_17436} {RNA1509_16743, RNA1509_17436, RNA815_3533} |
| 2. | MligTC455_36230 | 227 | 4.72 | Mlig455_040382 | Neo: - Age: - Region-enriched R5: 1.298/0.00939 |
BCAP31 | 1.797 | - | - | 0.953 | - | - | 0.844 | Mlig455_040382 {REF} {Length: 1476} {TRANSSPLICED} {Pfam: Bap31/Bap29 transmembrane region [PF05529.14, score=82.5]} {Human: ENSG00000185825, BCAP31, B cell receptor associated protein 31, [Score=70.9, Expect=5e-15]; ENSG00000075790, BCAP29, B cell receptor associated protein 29, [Score=69.3, Expect=1e-14]; ENSG00000283852, BCAP29, B cell receptor associated protein 29, [Score=69.3, Expect=1e-14]} {Mouse: ENSMUSG00000020650, Bcap29, B cell receptor associated protein 29, [Score=67.4, Expect=1e-13]; ENSMUSG00000002015, Bcap31, B cell receptor associated protein 31, [Score=64.3, Expect=2e-12]} {Dmel: FBgn0035165, CG13887, [Score=72.4, Expect=1e-15]} {Celegans: WBGene00021883, Y54G2A.18, 4D656, [Score=72.0, Expect=1e-15]} {RNA1509_24692, RNA1509_56519, RNA1509_57332} {RNA1310_39268, RNA1509_24692, RNA1509_56519, RNA1509_57332} {RNA1509_24692, RNA1509_56519, RNA1509_57332, RNA815_20971.1} |
| 3. | MligTC455_31540 | 586 | 12.21 | Mlig455_009199 | Neo: Int S/G2/M Age: Up-Down-Down |
CPSF1 | 1.691 | 0.740 | - | - | - | - | 0.951 | Mlig455_009199 {REF} {Length: 7327} {TRANSSPLICED} {Pfam: CPSF A subunit region [PF03178.17, score=217.3]; Mono-functional DNA-alkylating methyl methanesulfonate N-term [PF10433.11, score=80.2]} {Human: ENSG00000071894, CPSF1, cleavage and polyadenylation specific factor 1, [RH, Score=567, Expect=4e-173]; ENSG00000285049, CPSF1, cleavage and polyadenylation specific factor 1, [RH, Score=567, Expect=4e-173]} {Mouse: ENSMUSG00000034022, Cpsf1, cleavage and polyadenylation specific factor 1, [RH, Score=570, Expect=3e-174]} {Dmel: FBgn0024698, Cpsf160, Cleavage and polyadenylation specificity factor 160, [RH, Score=473, Expect=8e-140]} {Celegans: WBGene00022301, cpsf-1, Probable cleavage and polyadenylation specificity factor subunit 1, [RH, Score=364, Expect=5e-103]} {Smed: dd_Smed_v6_8644_0_1, dd_Smed_v6_8644_0_1, [RH, Score=468, Expect=1e-137]} {RNA1509_23949, RNA1509_5909} {RNA1310_503.1, RNA1509_23949, RNA1509_5909} {RNA1509_23949, RNA1509_5909, RNA815_575.1} |
| 4. | MligTC455_48278 | 8 | 0.17 | Mlig455_062907 | Neo: - Age: - |
0.975 | - | - | - | 0.975 | - | - | Mlig455_062907 {REF} {Length: 1334} {NoTransDecoderORF} {RNA1310_104657} {RNA815_29523} | |
| 5. | MligTC455_30288 | 218 | 4.54 | Mlig455_023806 | Neo: - Age: Up-Down-Down |
0.972 | - | - | 0.972 | - | - | - | Mlig455_023806 {REF} {Length: 10659} {Pfam: SH3 domain [PF17902.3, score=37.2]} {Dmel: FBgn0013733, shot, short stop, [Score=57.0, Expect=1e-07]} {Smed: dd_Smed_v6_8220_0_6, dd_Smed_v6_8220_0_6, [Score=137, Expect=2e-32]} {RNA1509_19944, RNA1509_50948} {RNA1310_8914, RNA1509_19944, RNA1509_50948} {RNA1509_19944, RNA1509_50948, RNA815_7443} | |
| 6. | MligTC455_16855 | 131 | 2.72 | Mlig455_045460 | Neo: Int S/G2/M Age: Up-Down-Down |
CTDP1 | 0.966 | - | - | - | - | - | 0.966 | Mlig455_045460 {REF} {Length: 6244} {Pfam: NLI interacting factor-like phosphatase [PF03031.20, score=83.4]; Biotin-lipoyl like [PF13533.8, score=24.8]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=22.8]} {Human: ENSG00000060069, CTDP1, CTD phosphatase subunit 1, [RH, Score=265, Expect=6e-76]; ENSG00000282752, CTDP1, CTD phosphatase subunit 1, [RH, Score=263, Expect=8e-76]} {Mouse: ENSMUSG00000033323, Ctdp1, CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1, [RH, Score=266, Expect=4e-76]} {Dmel: FBgn0035026, Fcp1, TFIIF-interacting CTD phosphatase, [RH, Score=300, Expect=7e-89]} {Celegans: WBGene00009479, fcp-1, FCP1 (Yeast TFIIF-interacting CTD phosphatase subunit) homolog, [RH, Score=281, Expect=2e-84]} {Smed: dd_Smed_v6_11212_1_1, dd_Smed_v6_11212_1_1, [RH, Score=263, Expect=8e-77]} {RNA1509_8613} {RNA1310_8460} {RNA815_689.1} |
| 7. | MligTC455_39009 | 42 | 0.88 | Mlig455_022189, Mlig455_046042 | Neo: - Age: - |
0.966 | - | - | - | 0.966 | - | - | Mlig455_022189 {REF} {Length: 198} {NoTransDecoderORF} {RNA1509_54430} {RNA1310_59969} {RNA815_41194.1} Mlig455_046042 {REF} {Length: 660} {NoTransDecoderORF} {RNA1509_59553} {RNA1310_127391} {RNA815_64986} |
|
| 8. | MligTC455_25384 | 164 | 3.42 | Mlig455_017652 | Neo: - Age: - Regeneration-enriched R6: 4.225 |
SF3B3 | 0.962 | - | - | - | - | - | 0.962 | Mlig455_017652 {REF} {Length: 4056} {Pfam: Mono-functional DNA-alkylating methyl methanesulfonate N-term [PF10433.11, score=591.2]; CPSF A subunit region [PF03178.17, score=274.4]} {Human: ENSG00000189091, SF3B3, splicing factor 3b subunit 3, [RH, Score=1840, Expect=0.0]} {Mouse: ENSMUSG00000033732, Sf3b3, splicing factor 3b, subunit 3, [RH, Score=1841, Expect=0.0]} {Dmel: FBgn0035162, Sf3b3, Splicing factor 3b subunit 3, [RH, Score=1713, Expect=0.0]} {Celegans: WBGene00019323, teg-4, Tumorous Enhancer of Glp-1(Gf), [RH, Score=1405, Expect=0.0]} {Smed: dd_Smed_v6_4241_0_1, dd_Smed_v6_4241_0_1, [RH, Score=1600, Expect=0.0]} {RNA1509_25911} {RNA1310_2503} {RNA815_4779} |
| 9. | MligTC455_16084 | 669 | 13.94 | Mlig455_064829 | Neo: - Age: - Region-enriched R5: 1.583/0.01422 |
ERGIC3 | 0.961 | - | - | - | - | - | 0.961 | Mlig455_064829 {REF} {Length: 11460} {TRANSSPLICED} {Pfam: Endoplasmic reticulum vesicle transporter [PF07970.14, score=268.9]; Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) [PF13850.8, score=99.6]} {Human: ENSG00000125991, ERGIC3, ERGIC and golgi 3, [RH, Score=385, Expect=3e-132]} {Mouse: ENSMUSG00000005881, Ergic3, ERGIC and golgi 3, [RH, Score=383, Expect=2e-131]} {Dmel: FBgn0036489, CG7011, [RH, Score=301, Expect=5e-100]} {Celegans: WBGene00010725, erv-46, Yeast ERV (ER to Golgi transport Vesicle protein) homolog, [RH, Score=314, Expect=6e-105]} {Smed: dd_Smed_v6_8239_0_1, dd_Smed_v6_8239_0_1, [RH, Score=399, Expect=8e-138]} {RNA1509_12548, RNA1509_24446, RNA1509_27360, RNA1509_46735} {RNA1310_19725, RNA1509_12548, RNA1509_24446, RNA1509_27360, RNA1509_46735} {RNA1509_12548, RNA1509_24446, RNA1509_27360, RNA1509_46735, RNA815_9609} |
| 10. | MligTC455_53463 | 165 | 3.44 | Mlig455_050404 | Neo: Irradiation Age: - |
DPF3 | 0.96 | - | - | 0.960 | - | - | - | Mlig455_050404 {REF} {Length: 2562} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=61.4]; N-terminal domain of DPF2/REQ. [PF14051.8, score=54.2]} {Human: ENSG00000205683, DPF3, double PHD fingers 3, [RH, Score=155, Expect=6e-42]; ENSG00000011332, DPF1, double PHD fingers 1, [RH, Score=154, Expect=3e-42]; ENSG00000133884, DPF2, double PHD fingers 2, [RH, Score=154, Expect=2e-41]} {Mouse: ENSMUSG00000024826, Dpf2, D4, zinc and double PHD fingers family 2, [RH, Score=155, Expect=6e-42]; ENSMUSG00000021221, Dpf3, D4, zinc and double PHD fingers, family 3, [RH, Score=155, Expect=4e-42]; ENSMUSG00000030584, Dpf1, D4, zinc and double PHD fingers family 1, [RH, Score=154, Expect=6e-42]} {Dmel: FBgn0033015, d4, [RH, Score=155, Expect=2e-41]} {Celegans: WBGene00016200, dpff-1, Zinc finger protein dpff-1, [RH, Score=132, Expect=5e-34]} {Smed: dd_Smed_v6_5825_0_1, dd_Smed_v6_5825_0_1, [RH, Score=160, Expect=3e-44]} {RNA1509_33008} {RNA1310_18817.1, RNA1509_33008} {RNA1509_33008, RNA815_27147} |
| 11. | MligTC455_51380 | 335 | 6.99 | Mlig455_035297 | Neo: Irradiation Age: - Region-enriched R2: 2.629/0.00514 |
0.959 | - | - | - | - | - | 0.959 | Mlig455_035297 {REF} {Length: 3136} {RNA1509_9123} {RNA1310_19144, RNA1509_9123} {RNA1509_9123, RNA815_20926} | |
| 12. | MligTC455_49960 | 1384 | 28.84 | Mlig455_031699, Mlig455_031705, Mlig455_040125 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.252 Region-enriched R5: 2.333/0.00101 Regeneration-enriched R6: 2.260 |
DDX18 | 0.958 | - | - | - | - | - | 0.958 | Mlig455_031699 {REF} {Length: 3343} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=156.7]; Helicase conserved C-terminal domain [PF00271.33, score=88.1]; Domain of unknown function (DUF4217) [PF13959.8, score=60.3]; Type III restriction enzyme, res subunit [PF04851.17, score=33.0]} {Human: ENSG00000088205, DDX18, DEAD-box helicase 18, [RH, Score=641, Expect=0.0]} {Mouse: ENSMUSG00000001674, Ddx18, DEAD (Asp-Glu-Ala-Asp) box polypeptide 18, [RH, Score=633, Expect=0.0]} {Dmel: FBgn0266581, pit, pitchoune, [RH, Score=648, Expect=0.0]} {Celegans: WBGene00015232, B0511.6, RNA helicase, [RH, Score=584, Expect=0.0]} {Smed: dd_Smed_v6_10133_0_1, dd_Smed_v6_10133_0_1, [RH, Score=502, Expect=4e-173]} {RNA1509_29214} {RNA1310_12090} {RNA815_6437} Mlig455_031705 {REF} {Length: 2706} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=156.7]; Helicase conserved C-terminal domain [PF00271.33, score=88.1]; Domain of unknown function (DUF4217) [PF13959.8, score=60.2]; Type III restriction enzyme, res subunit [PF04851.17, score=32.9]} {Human: ENSG00000088205, DDX18, DEAD-box helicase 18, [RH, Score=642, Expect=0.0]} {Mouse: ENSMUSG00000001674, Ddx18, DEAD (Asp-Glu-Ala-Asp) box polypeptide 18, [RH, Score=632, Expect=0.0]} {Dmel: FBgn0266581, pit, pitchoune, [RH, Score=648, Expect=0.0]} {Celegans: WBGene00015232, B0511.6, RNA helicase, [RH, Score=585, Expect=0.0]} {Smed: dd_Smed_v6_10133_0_1, dd_Smed_v6_10133_0_1, [RH, Score=502, Expect=4e-173]} {RNA1509_18601, RNA1509_20245, RNA1509_29214, RNA1509_37895, RNA1509_45006, RNA1509_45007, RNA1509_55896, RNA1509_56010} {RNA1310_12090, RNA1509_18601, RNA1509_20245, RNA1509_29214, RNA1509_37895, RNA1509_45006, RNA1509_45007, RNA1509_55896, RNA1509_56010} {RNA1509_18601, RNA1509_20245, RNA1509_29214, RNA1509_37895, RNA1509_45006, RNA1509_45007, RNA1509_55896, RNA1509_56010, RNA815_6437} Mlig455_040125 {REF} {Length: 1190} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=46.7]} {Human: ENSG00000088205, DDX18, DEAD-box helicase 18, [Score=79.0, Expect=2e-17]} {Mouse: ENSMUSG00000001674, Ddx18, DEAD (Asp-Glu-Ala-Asp) box polypeptide 18, [Score=76.3, Expect=1e-16]} {Dmel: FBgn0266581, pit, pitchoune, [Score=82.0, Expect=9e-19]} {Celegans: WBGene00015232, B0511.6, RNA helicase, [Score=76.3, Expect=6e-17]} {Smed: dd_Smed_v6_10133_0_1, dd_Smed_v6_10133_0_1, [Score=72.4, Expect=1e-15]} {RNA1509_56010} {RNA1310_12090} {RNA815_6437} |
| 13. | MligTC455_18094 | 181 | 3.78 | Mlig455_042157 | Neo: Int S/G2/M Age: Down-Down-Down Region-enriched R5: 2.086/0.01667 |
0.957 | - | - | - | - | - | 0.957 | Mlig455_042157 {REF} {Length: 1425} {TRANSSPLICED} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=38.8]} {Dmel: FBgn0043002, Chrac-14, Chromatin accessibility complex 14kD protein, [RH, Score=55.8, Expect=9e-10]} {RNA1509_35988} {RNA1310_23246} {RNA815_18085} | |
| 14. | MligTC455_35364 | 266 | 5.55 | Mlig455_070630 | Neo: Germline Age: Up-Down-Down, logFC(26M/2M)=-0.469 Region-specific R4: 5.666 Region-enriched R4: 2.478/0.00879 |
0.955 | - | - | - | 0.955 | - | - | Mlig455_070630 {REF} {Length: 2728} {RNA1509_43675, RNA1509_44638, RNA1509_46183, RNA1509_6283, RNA1509_6480} {RNA1310_7372, RNA1509_43675, RNA1509_44638, RNA1509_46183, RNA1509_6283, RNA1509_6480} {RNA1509_43675, RNA1509_44638, RNA1509_46183, RNA1509_6283, RNA1509_6480, RNA815_2391} | |
| 15. | MligTC455_44967 | 402 | 8.38 | Mlig455_050720 | Neo: Int S/G2/M Age: - |
NUP133 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_050720 {REF} {Length: 7508} {TRANSSPLICED} {Pfam: Non-repetitive/WGA-negative nucleoporin C-terminal [PF03177.16, score=65.8]} {Human: ENSG00000069248, NUP133, nucleoporin 133, [RH, Score=152, Expect=4e-36]} {Mouse: ENSMUSG00000039509, Nup133, nucleoporin 133, [RH, Score=163, Expect=1e-39]} {Dmel: FBgn0039004, Nup133, Nucleoporin 133kD, [RH, Score=102, Expect=3e-21]} {Smed: dd_Smed_v6_5977_0_1, dd_Smed_v6_5977_0_1, [RH, Score=55.1, Expect=5e-07]} {RNA1509_31103, RNA1509_9832} {RNA1310_2306.1, RNA1509_31103, RNA1509_9832} {RNA1509_31103, RNA1509_9832, RNA815_1062} |
| 16. | MligTC455_49391 | 1700 | 35.41 | Mlig455_040829, Mlig455_040928, Mlig455_049169 | Neo: - Age: Down-Up-Up |
0.951 | - | - | - | - | - | 0.951 | Mlig455_040829 {REF} {Length: 1511} {TRANSSPLICED} {RNA1509_19199} {RNA1310_39586, RNA1509_19199} {RNA1509_19199, RNA815_40218} Mlig455_040928 {REF} {Length: 1511} {TRANSSPLICED} {RNA1509_19199, RNA1509_30421, RNA1509_55207} {RNA1310_39586, RNA1509_30421, RNA1509_55207} {RNA1509_30421, RNA1509_55207, RNA815_40218} Mlig455_049169 {REF} {Length: 836} {RNA1509_19199} {RNA1310_39586} {RNA815_40218} |
|
| 17. | MligTC455_16934 | 285 | 5.93 | Mlig455_022742 | Neo: Irradiation Age: - |
KIF23 | 0.95 | - | - | 0.950 | - | - | - | Mlig455_022742 {REF} {Length: 3841} {TRANSSPLICED} {Pfam: Kinesin motor domain [PF00225.25, score=298.8]; Arf6-interacting domain of mitotic kinesin-like protein 1 [PF16540.7, score=96.4]; Microtubule binding [PF16796.7, score=60.6]} {Human: ENSG00000137807, KIF23, kinesin family member 23, [RH, Score=417, Expect=5e-133]} {Mouse: ENSMUSG00000032254, Kif23, kinesin family member 23, [RH, Score=375, Expect=7e-116]} {Dmel: FBgn0011692, pav, pavarotti, [Score=435, Expect=3e-139]} {Celegans: WBGene00006974, zen-4, Kinesin-like protein, [Score=367, Expect=2e-114]} {Smed: dd_Smed_v6_9585_0_1, dd_Smed_v6_9585_0_1, [RH, Score=273, Expect=4e-80]} {RNA1509_14752, RNA1509_36120, RNA1509_53457} {RNA1310_7358.2, RNA1509_14752, RNA1509_36120, RNA1509_53457} {RNA1509_14752, RNA1509_36120, RNA1509_53457, RNA815_8976} |