Data search


search
Exact
Search

Results for MligTC455_33486

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_33486 297 6.18 Mlig455_048747

Neo: Int S/G2/M

Age: logFC(26M/2M)=-0.583

Mlig455_048747 {REF} {Length: 1479} {TRANSSPLICED} {Smed: dd_Smed_v6_4347_0_1, dd_Smed_v6_4347_0_1, [RH, Score=53.1, Expect=2e-09]} {RNA1509_37074} {RNA1310_22957} {RNA815_949}

Cumulative graph for MligTC455_33486

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.816 3.129 0.27439 0.92521
RegionR2 -1.173 3.129 0.05927 0.29321
RegionR3 -0.668 3.129 0.12543 0.60980
RegionR4 1.223 3.129 0.05394 0.20293
RegionR5 0.116 3.129 0.75479 1.00000
RegionR6 -0.169 3.129 0.69569 1.00000
RegionR7 -1.247 3.129 0.07547 0.53055
RegionR8 0.102 3.129 0.89776 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -6.066 3.129 0.22555 0.95604
RegenerationR2 -0.145 3.129 0.77117 0.98077
RegenerationR3 -0.196 3.129 0.70945 0.95139
RegenerationR4 -0.871 3.129 0.13234 0.55028
RegenerationR5 0.14 3.129 0.74920 0.97158
RegenerationR6 -0.438 3.129 0.43441 0.76046
RegenerationBL 1.566 3.129 0.01431 0.12475
RegenerationTP -0.069 3.129 0.91946 1.00000


Genes with expression patterns similar to MligTC455_33486

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_33486 297 6.18 Mlig455_048747

Neo: Int S/G2/M

Age: logFC(26M/2M)=-0.583

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_048747 {REF} {Length: 1479} {TRANSSPLICED} {Smed: dd_Smed_v6_4347_0_1, dd_Smed_v6_4347_0_1, [RH, Score=53.1, Expect=2e-09]} {RNA1509_37074} {RNA1310_22957} {RNA815_949}
2. MligTC455_48350 557 11.6 Mlig455_020704, Mlig455_020772

Neo: -

Age: -

Region-enriched R5: 1.534/0.04356

CNPY4 0.977 - - - - 0.977 -

Mlig455_020704 {REF} {Length: 1408} {TRANSSPLICED} {Pfam: TLR4 regulator and MIR-interacting MSAP [PF11938.10, score=114.2]} {Human: ENSG00000166997, CNPY4, canopy FGF signaling regulator 4, [RH, Score=139, Expect=2e-40]; ENSG00000137161, CNPY3, canopy FGF signaling regulator 3, [RH, Score=135, Expect=9e-39]} {Mouse: ENSMUSG00000036968, Cnpy4, canopy FGF signaling regulator 4, [RH, Score=136, Expect=1e-39]; ENSMUSG00000023973, Cnpy3, canopy FGF signaling regulator 3, [RH, Score=135, Expect=5e-39]} {Dmel: FBgn0036847, CNPYb, Canopy b, [RH, Score=143, Expect=1e-42]} {Celegans: WBGene00007531, C11H1.7, [RH, Score=89.7, Expect=2e-22]} {Smed: dd_Smed_v6_4234_0_1, dd_Smed_v6_4234_0_1, [RH, Score=145, Expect=1e-43]} {RNA1509_24977, RNA1509_46644} {RNA1310_24040, RNA1509_24977, RNA1509_46644} {RNA1509_24977, RNA1509_46644, RNA815_21738}

Mlig455_020772 {REF} {Length: 1410} {TRANSSPLICED} {Pfam: TLR4 regulator and MIR-interacting MSAP [PF11938.10, score=114.2]} {Human: ENSG00000166997, CNPY4, canopy FGF signaling regulator 4, [RH, Score=139, Expect=2e-40]; ENSG00000137161, CNPY3, canopy FGF signaling regulator 3, [RH, Score=135, Expect=9e-39]} {Mouse: ENSMUSG00000036968, Cnpy4, canopy FGF signaling regulator 4, [RH, Score=136, Expect=1e-39]; ENSMUSG00000023973, Cnpy3, canopy FGF signaling regulator 3, [RH, Score=135, Expect=5e-39]} {Dmel: FBgn0036847, CNPYb, Canopy b, [RH, Score=143, Expect=1e-42]} {Celegans: WBGene00007531, C11H1.7, [RH, Score=89.7, Expect=2e-22]} {Smed: dd_Smed_v6_4234_0_1, dd_Smed_v6_4234_0_1, [RH, Score=145, Expect=1e-43]} {RNA1509_24977, RNA1509_45473} {RNA1310_24040, RNA1509_45473} {RNA1509_45473, RNA815_21738}
3. MligTC455_45938 198 4.12 Mlig455_057668

Neo: -

Age: -

MIEN1 0.964 - - - - 0.964 - Mlig455_057668 {REF} {Length: 921} {Pfam: Rdx family [PF10262.11, score=34.9]} {Human: ENSG00000141741, MIEN1, migration and invasion enhancer 1, [RH, Score=60.8, Expect=4e-13]} {Mouse: ENSMUSG00000002580, Mien1, migration and invasion enhancer 1, [RH, Score=59.3, Expect=1e-12]} {Dmel: FBgn0040650, CG15456, [RH, Score=55.1, Expect=3e-11]} {Smed: dd_Smed_v6_16473_0_1, dd_Smed_v6_16473_0_1, [RH, Score=58.9, Expect=2e-13]} {RNA1509_2054} {RNA1310_35426.1} {RNA815_16195}
4. MligTC455_43082 281 5.85 Mlig455_043748, Mlig455_047477

Neo: -

Age: -

0.962 - - - - 0.962 -

Mlig455_043748 {REF} {Length: 674} {RNA1509_7484} {RNA1310_67034} {RNA815_1925}

Mlig455_047477 {REF} {Length: 677} {RNA1509_7484} {RNA1310_67034} {RNA815_1925}
5. MligTC455_32663 99 2.06 Mlig455_067221

Neo: Int S/G2/M

Age: Up-Down-Up

0.96 - - - - 0.960 - Mlig455_067221 {REF} {Length: 2415} {Pfam: PH domain [PF00169.31, score=25.8]} {RNA1509_43721} {RNA1310_326} {RNA815_8437.1}
6. MligTC455_26872 361 7.52 Mlig455_062059

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.245

RPL31 0.959 - - 0.959 - - - Mlig455_062059 {REF} {Length: 1947} {TRANSSPLICED} {Pfam: Ribosomal protein L31e [PF01198.21, score=148.9]; SpoU rRNA Methylase family [PF00588.21, score=72.6]; RNA 2'-O ribose methyltransferase substrate binding [PF08032.14, score=30.1]} {Human: ENSG00000071082, RPL31, ribosomal protein L31, [RH, Score=184, Expect=8e-57]} {Mouse: ENSMUSG00000073702, Rpl31, ribosomal protein L31, [RH, Score=184, Expect=6e-57]} {Dmel: FBgn0285949, RpL31, Ribosomal protein L31, [RH, Score=146, Expect=2e-42]} {Celegans: WBGene00004445, rpl-31, 60S ribosomal protein L31, [RH, Score=151, Expect=1e-44]} {Smed: dd_Smed_v6_113_0_1, dd_Smed_v6_113_0_1, [RH, Score=181, Expect=4e-56]} {RNA1509_31842, RNA1509_48803} {RNA1310_35179, RNA1509_31842, RNA1509_48803} {RNA1509_31842, RNA1509_48803, RNA815_35805.2}
7. MligTC455_51970 10 0.21 Mlig455_058942

Neo: -

Age: Up-Down-Down

0.958 - - - - 0.958 - Mlig455_058942 {REF} {Length: 2794} {NoTransDecoderORF} {RNA1509_51255} {RNA1310_33135} {RNA815_39433}
8. MligTC455_21878 777 16.19 Mlig455_005870

Neo: -

Age: logFC(26M/2M)=-1.101

TRPM1 0.955 - - - - 0.955 - Mlig455_005870 {REF} {Length: 5568} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=44.1]; Ankyrin repeats (many copies) [PF13637.8, score=38.2]; Ion transport protein [PF00520.33, score=36.8]; Ankyrin repeats (many copies) [PF13857.8, score=36.7]; Ankyrin repeat [PF13606.8, score=26.0]; Ankyrin repeat [PF00023.32, score=25.0]} {Human: ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=73.2, Expect=3e-12]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=73.2, Expect=3e-12]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=74.7, Expect=8e-13]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=59.7, Expect=2e-08]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=70.1, Expect=1e-11]} {Smed: dd_Smed_v6_17981_0_1, dd_Smed_v6_17981_0_1, [Score=93.6, Expect=7e-19]} {RNA1509_43082, RNA1509_7199} {RNA1310_2221.1, RNA1509_43082, RNA1509_7199} {RNA1509_43082, RNA1509_7199, RNA815_581}
9. MligTC455_40918 807 16.81 Mlig455_064445

Neo: -

Age: -

0.955 - - - - - 0.955 Mlig455_064445 {REF} {Length: 3565} {TRANSSPLICED} {Pfam: BTB/POZ domain [PF00651.33, score=62.0]} {Dmel: FBgn0030961, CG7058, [RH, Score=81.6, Expect=2e-15]} {Smed: dd_Smed_v6_1751_0_1, dd_Smed_v6_1751_0_1, [Score=51.2, Expect=2e-06]} {RNA1509_15372, RNA1509_40543} {RNA1310_21275, RNA1509_40543} {RNA1509_40543, RNA815_19021}
10. MligTC455_53968 153 3.19 Mlig455_051460, Mlig455_066690

Neo: -

Age: Down-Up-Down

0.955 - - - - 0.955 -

Mlig455_051460 {REF} {Length: 1441} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_22299, RNA1509_25615} {RNA1310_42484.1, RNA1509_25615} {RNA1509_25615, RNA815_28303.1}

Mlig455_066690 {REF} {Length: 1436} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_22299} {RNA1310_42484.1, RNA1509_22299} {RNA1509_22299, RNA815_28303.1}
11. MligTC455_21716 16 0.34 Mlig455_010621

Neo: -

Age: -

0.953 - - - - 0.953 - Mlig455_010621 {REF} {Length: 1606} {NoTransDecoderORF} {RNA1310_115082}
12. MligTC455_14416 21 0.43 Mlig455_023678

Neo: -

Age: -

DAAM2 0.952 - - - - 0.952 - Mlig455_023678 {REF} {Length: 2871} {TRANSSPLICED} {Pfam: Diaphanous GTPase-binding Domain [PF06371.15, score=84.4]; Formin Homology 2 Domain [PF02181.25, score=65.2]; Diaphanous FH3 Domain [PF06367.18, score=36.5]} {Human: ENSG00000146122, DAAM2, dishevelled associated activator of morphogenesis 2, [Score=119, Expect=9e-27]} {Mouse: ENSMUSG00000040260, Daam2, dishevelled associated activator of morphogenesis 2, [Score=110, Expect=4e-24]} {Dmel: FBgn0025641, DAAM, Dishevelled Associated Activator of Morphogenesis, [Score=105, Expect=1e-22]} {RNA1509_37113} {RNA1310_27273.1} {RNA815_14276}
13. MligTC455_48954 316 6.59 Mlig455_000336, Mlig455_067936

Neo: -

Age: -

Region-enriched R8: 6.016/0.00000
Region-enriched R7: 4.803/0.00000
Region-enriched R6: 2.001/0.03096

WNT2 0.951 - - - - 0.951 -

Mlig455_000336 {REF} {Length: 2268} {Pfam: wnt family [PF00110.21, score=150.7]} {Human: ENSG00000105989, WNT2, Wnt family member 2, [Score=94.4, Expect=1e-20]; ENSG00000162552, WNT4, Wnt family member 4, [Score=92.8, Expect=3e-20]} {Mouse: ENSMUSG00000010797, Wnt2, wingless-type MMTV integration site family, member 2, [Score=95.1, Expect=4e-21]; ENSMUSG00000036856, Wnt4, wingless-type MMTV integration site family, member 4, [Score=93.2, Expect=2e-20]} {Dmel: FBgn0010453, Wnt4, Wnt oncogene analog 4, [Score=75.5, Expect=3e-14]} {Celegans: WBGene00000857, cwn-1, [Score=95.5, Expect=2e-21]} {Smed: dd_Smed_v6_14391_0_1, dd_Smed_v6_14391_0_1, [RH, Score=137, Expect=4e-36]} {RNA1509_39977} {RNA1310_11459, RNA1509_39977} {RNA1509_39977, RNA815_18855}

Mlig455_067936 {REF} {Length: 2361} {Pfam: wnt family [PF00110.21, score=149.2]} {Human: ENSG00000105989, WNT2, Wnt family member 2, [Score=96.7, Expect=2e-21]; ENSG00000162552, WNT4, Wnt family member 4, [Score=92.0, Expect=6e-20]} {Mouse: ENSMUSG00000010797, Wnt2, wingless-type MMTV integration site family, member 2, [Score=97.4, Expect=7e-22]} {Dmel: FBgn0010453, Wnt4, Wnt oncogene analog 4, [Score=75.5, Expect=3e-14]} {Celegans: WBGene00000857, cwn-1, [Score=96.3, Expect=1e-21]} {Smed: dd_Smed_v6_14391_0_1, dd_Smed_v6_14391_0_1, [RH, Score=133, Expect=7e-35]} {RNA1509_39977} {RNA1310_11459} {RNA815_18855}
14. MligTC455_16097 136 2.83 Mlig455_014805

Neo: -

Age: -

Regeneration-upregulated BL: 4.102

Regeneration-enriched BL: 4.102

0.95 - - - - 0.950 - Mlig455_014805 {REF} {Length: 1202} {RNA1509_24228} {RNA1310_15368.2}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA