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Results for MligTC455_16435

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_16435 33 0.69 Mlig455_070040

Neo: Int S/G2/M

Age: -

 Mlig455_070040 {REF} {Length: 1149} {RNA1310_54637} {RNA815_34864}

Cumulative graph for MligTC455_16435

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.529 1.193 0.99950 1.00000
RegionR2 -0.977 1.193 0.99950 1.00000
RegionR3 3.348 1.193 0.10839 0.57362
RegionR4 3.118 1.193 0.26062 0.56302
RegionR5 1.714 1.193 0.27416 0.60012
RegionR6 -0.988 1.193 0.99954 1.00000
RegionR7 -1.669 1.193 0.99987 1.00000
RegionR8 -2.017 1.193 0.99956 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.088 1.193 0.99995 1.00000
RegenerationR2 1.818 1.193 0.34545 0.77911
RegenerationR3 0.702 1.193 0.69240 0.94524
RegenerationR4 0.814 1.193 0.72615 0.96333
RegenerationR5 2.744 1.193 0.34302 0.75969
RegenerationR6 4.616 1.193 0.16523 0.49543
RegenerationBL 0.462 1.193 1.00000 1.00000
RegenerationTP 4.086 1.193 0.31619 0.76109


Genes with expression patterns similar to MligTC455_16435

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_16435 33 0.69 Mlig455_070040

Neo: Int S/G2/M

Age: -

 5 1.000 1.000 - 1.000 1.000 1.000 Mlig455_070040 {REF} {Length: 1149} {RNA1310_54637} {RNA815_34864}
2. MligTC455_15365 15 0.3 Mlig455_060332

Neo: -

Age: -

 1.879 0.921 - - - 0.958 - Mlig455_060332 {REF} {Length: 978} {RNA1310_84789}
3. MligTC455_15865 6 0.12 Mlig455_004735

Neo: -

Age: -

 TRPC5 0.985 - - - - 0.985 - Mlig455_004735 {REF} {Length: 2679} {Pfam: Transient receptor ion channel II [PF08344.13, score=102.7]; Ion transport protein [PF00520.33, score=91.0]; Polycystin cation channel [PF08016.14, score=32.2]; Ankyrin repeats (3 copies) [PF12796.9, score=31.0]; Ankyrin repeat [PF13606.8, score=29.9]; Ankyrin repeats (many copies) [PF13637.8, score=25.5]; Ankyrin repeat [PF00023.32, score=19.5]} {Human: ENSG00000072315, TRPC5, transient receptor potential cation channel subfamily C member 5, [Score=621, Expect=0.0]} {Mouse: ENSMUSG00000041710, Trpc5, transient receptor potential cation channel, subfamily C, member 5, [Score=620, Expect=0.0]; ENSMUSG00000027748, Trpc4, transient receptor potential cation channel, subfamily C, member 4, [Score=589, Expect=0.0]} {Dmel: FBgn0032593, Trpgamma, Transient receptor potential cation channel gamma, [Score=569, Expect=0.0]} {Celegans: WBGene00006614, trp-1, Transient-receptor-potential-like protein, [Score=754, Expect=0.0]} {Smed: dd_Smed_v6_20491_0_1, dd_Smed_v6_20491_0_1, [Score=522, Expect=2e-171]} {RNA1310_103000} {RNA815_44973}
4. MligTC455_30070 8 0.16 Mlig455_004769

Neo: -

Age: Up-Down-Down

 TOP3A 0.973 - - - - 0.973 - Mlig455_004769 {REF} {Length: 4024} {TRANSSPLICED} {Pfam: DNA topoisomerase [PF01131.22, score=343.5]; Toprim domain [PF01751.24, score=66.6]} {Human: ENSG00000177302, TOP3A, DNA topoisomerase III alpha, [Score=704, Expect=0.0]; ENSG00000284238, TOP3A, DNA topoisomerase III alpha, [Score=704, Expect=0.0]} {Mouse: ENSMUSG00000002814, Top3a, topoisomerase (DNA) III alpha, [Score=704, Expect=0.0]} {Dmel: FBgn0040268, Top3alpha, Topoisomerase 3alpha, [Score=671, Expect=0.0]} {Celegans: WBGene00006596, top-3, DNA topoisomerase 3, [Score=580, Expect=0.0]} {Smed: dd_Smed_v6_20479_0_1, dd_Smed_v6_20479_0_1, [Score=526, Expect=2e-178]} {RNA1509_11005} {RNA1310_4689.1} {RNA815_5623}
5. MligTC455_03435 34 0.71 Mlig455_068694, Mlig455_068720

Neo: -

Age: -

 0.971 - - - - 0.971 -

Mlig455_068694 {REF} {Length: 508} {NoTransDecoderORF} {RNA1509_46565} {RNA1310_64787} {RNA815_53933}

Mlig455_068720 {REF} {Length: 662} {NoTransDecoderORF} {RNA1509_22119} {RNA1310_64787} {RNA815_53933}
6. MligTC455_16274 6 0.13 Mlig455_029336

Neo: -

Age: -

 0.97 - - - - 0.970 - Mlig455_029336 {REF} {Length: 607} {Pfam: Domain of unknown function (DUF3898) [PF13037.8, score=19.0]}
7. MligTC455_16631 31 0.65 Mlig455_023850

Neo: -

Age: Down-Down-Up

 0.959 - - - - - 0.959 Mlig455_023850 {REF} {Length: 1728} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=36.1]} {RNA1310_24638} {RNA815_9247}
8. MligTC455_26427 15 0.31 Mlig455_054140

Neo: -

Age: logFC(26M/2M)=-1.151

 TRPM1 0.959 - - - - 0.959 - Mlig455_054140 {REF} {Length: 5171} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=79.8]; Ankyrin repeats (3 copies) [PF12796.9, score=77.6]; Ankyrin repeats (many copies) [PF13857.8, score=40.4]; Ankyrin repeat [PF00023.32, score=38.8]; Ankyrin repeat [PF13606.8, score=38.6]} {Human: ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=57.0, Expect=3e-07]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=57.0, Expect=3e-07]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=57.8, Expect=1e-07]; ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=56.6, Expect=3e-07]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=57.0, Expect=1e-07]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=61.2, Expect=6e-09]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=94.4, Expect=3e-19]} {RNA1509_29189} {RNA1310_1181, RNA1509_29189} {RNA1509_29189, RNA815_1111.1}
9. MligTC455_13867 2 0.04 Mlig455_018515

Neo: -

Age: -

 GRIN3B 0.958 - - - - 0.958 - Mlig455_018515 {REF} {Length: 1240} {Pfam: Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=33.1]} {Human: ENSG00000116032, GRIN3B, glutamate ionotropic receptor NMDA type subunit 3B, [Score=57.8, Expect=1e-10]} {Mouse: ENSMUSG00000002771, Grin2d, glutamate receptor, ionotropic, NMDA2D (epsilon 4), [Score=51.2, Expect=2e-08]; ENSMUSG00000039579, Grin3a, glutamate receptor ionotropic, NMDA3A, [Score=51.2, Expect=2e-08]; ENSMUSG00000035745, Grin3b, glutamate receptor, ionotropic, NMDA3B, [Score=50.4, Expect=3e-08]} {Dmel: FBgn0010399, Nmdar1, NMDA receptor 1, [Score=45.1, Expect=2e-06]} {Celegans: WBGene00003775, nmr-2, NMDA class glutamate Receptor; NMDA-type ionotropic glutamate receptor NMR-2, [Score=43.5, Expect=5e-06]} {Smed: dd_Smed_v6_8187_0_2, dd_Smed_v6_8187_0_2, [Score=57.4, Expect=5e-11]} {RNA1509_56685} {RNA1310_16080} {RNA815_17919}
10. MligTC455_30922 41 0.85 Mlig455_026594

Neo: -

Age: Up-Down-Down

 PACS2 0.956 - - - - 0.956 - Mlig455_026594 {REF} {Length: 6432} {Pfam: PACS-1 cytosolic sorting protein [PF10254.11, score=213.5]; Amiloride-sensitive sodium channel [PF00858.26, score=180.1]} {Human: ENSG00000179364, PACS2, phosphofurin acidic cluster sorting protein 2, [RH, Score=146, Expect=1e-34]} {Mouse: ENSMUSG00000021143, Pacs2, phosphofurin acidic cluster sorting protein 2, [RH, Score=140, Expect=3e-33]} {Dmel: FBgn0020647, KrT95D, Krueppel target at 95D, [RH, Score=133, Expect=7e-31]} {Celegans: WBGene00044077, tag-232, [RH, Score=78.6, Expect=2e-14]} {Smed: dd_Smed_v6_23028_0_1, dd_Smed_v6_23028_0_1, [Score=263, Expect=3e-75]} {RNA1509_39289} {RNA1310_8986.2} {RNA815_4629.1}
11. MligTC455_37543 156 3.25 Mlig455_043334

Neo: -

Age: -

 0.956 - - - 0.956 - - Mlig455_043334 {REF} {Length: 1292} {TRANSSPLICED} {RNA1509_57440} {RNA1310_17682} {RNA815_43178}
12. MligTC455_00801 10 0.2 Mlig455_032874

Neo: -

Age: -

 0.955 - - - - 0.955 - Mlig455_032874 {REF} {Length: 542} {NoTransDecoderORF} {RNA1310_26475}
13. MligTC455_09940 3 0.06 Mlig455_067083

Neo: -

Age: -

 0.955 - - - - 0.955 - Mlig455_067083 {REF} {Length: 158} {NoTransDecoderORF}
14. MligTC455_50746 169 3.52 Mlig455_002815

Neo: -

Age: logFC(26M/2M)=0.391

 TYW5 0.954 - - - - 0.954 - Mlig455_002815 {REF} {Length: 1947} {TRANSSPLICED} {Pfam: Cupin-like domain [PF13621.8, score=116.6]; JmjC domain, hydroxylase [PF02373.24, score=20.1]; Cupin superfamily protein [PF08007.14, score=19.8]} {Human: ENSG00000162971, TYW5, tRNA-yW synthesizing protein 5, [RH, Score=252, Expect=9e-82]} {Mouse: ENSMUSG00000048495, Tyw5, tRNA-yW synthesizing protein 5, [RH, Score=243, Expect=2e-78]} {Dmel: FBgn0035166, CG13902, [Score=69.7, Expect=6e-13]} {Smed: dd_Smed_v6_8202_0_1, dd_Smed_v6_8202_0_1, [RH, Score=243, Expect=7e-79]} {RNA1509_22421, RNA1509_40253} {RNA1310_30547, RNA1509_22421, RNA1509_40253} {RNA1509_22421, RNA1509_40253, RNA815_8750}
15. MligTC455_54650 3 0.05 Mlig455_052728

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_052728 {REF} {Length: 376} {Pfam: Procyclic acidic repetitive protein (PARP) [PF05887.13, score=28.2]}
16. MligTC455_39621 17 0.36 Mlig455_061228

Neo: Irradiation

Age: -

 NRDE2 0.951 - - - - 0.951 - Mlig455_061228 {REF} {Length: 5166} {TRANSSPLICED} {Pfam: NRDE-2, necessary for RNA interference [PF08424.12, score=139.3]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=39.1]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=37.8]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=35.1]; RING-type zinc-finger [PF13445.8, score=34.1]; Ring finger domain [PF13639.8, score=34.1]; Prokaryotic RING finger family 4 [PF14447.8, score=24.6]; zinc-RING finger domain [PF14634.8, score=23.9]; zinc finger of C3HC4-type, RING [PF15227.8, score=23.3]; RING-H2 zinc finger domain [PF12678.9, score=20.8]; U-box domain [PF04564.17, score=19.3]; zinc RING finger of MSL2 [PF16685.7, score=18.9]} {Human: ENSG00000119720, NRDE2, NRDE-2, necessary for RNA interference, domain containing, [RH, Score=134, Expect=1e-30]} {Mouse: ENSMUSG00000021179, Nrde2, nrde-2 necessary for RNA interference, domain containing, [RH, Score=124, Expect=8e-28]} {Dmel: FBgn0265356, tn, thin, [Score=55.8, Expect=3e-07]} {Smed: dd_Smed_v6_12142_0_1, dd_Smed_v6_12142_0_1, [RH, Score=102, Expect=2e-21]} {RNA1509_20291, RNA1509_37760} {RNA1310_3668.1, RNA1509_20291, RNA1509_37760} {RNA1509_20291, RNA1509_37760, RNA815_2487.1}

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