Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_50746 | 169 | 3.52 | Mlig455_002815 | Neo: - Age: logFC(26M/2M)=0.391 |
TYW5 | Mlig455_002815 {REF} {Length: 1947} {TRANSSPLICED} {Pfam: Cupin-like domain [PF13621.8, score=116.6]; JmjC domain, hydroxylase [PF02373.24, score=20.1]; Cupin superfamily protein [PF08007.14, score=19.8]} {Human: ENSG00000162971, TYW5, tRNA-yW synthesizing protein 5, [RH, Score=252, Expect=9e-82]} {Mouse: ENSMUSG00000048495, Tyw5, tRNA-yW synthesizing protein 5, [RH, Score=243, Expect=2e-78]} {Dmel: FBgn0035166, CG13902, [Score=69.7, Expect=6e-13]} {Smed: dd_Smed_v6_8202_0_1, dd_Smed_v6_8202_0_1, [RH, Score=243, Expect=7e-79]} {RNA1509_22421, RNA1509_40253} {RNA1310_30547, RNA1509_22421, RNA1509_40253} {RNA1509_22421, RNA1509_40253, RNA815_8750} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -2.933 | 2.396 | 0.10369 | 0.67792 | |
RegionR2 | 2.845 | 2.396 | 0.01207 | 0.11311 | |
RegionR3 | 0.343 | 2.396 | 0.61234 | 1.00000 | |
RegionR4 | -3.597 | 2.396 | 0.00383 | 0.02947 | |
RegionR5 | -0.82 | 2.396 | 0.20547 | 0.49882 | |
RegionR6 | 0.44 | 2.396 | 0.57514 | 1.00000 | |
RegionR7 | 1.25 | 2.396 | 0.15920 | 0.73663 | |
RegionR8 | 2.473 | 2.396 | 0.02902 | 0.33279 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | 1.963 | 2.396 | 0.95372 | 1.00000 | |
RegenerationR2 | 0.423 | 2.396 | 0.65329 | 0.93783 | |
RegenerationR3 | 2.561 | 2.396 | 0.02141 | 0.26580 | |
RegenerationR4 | 2.582 | 2.396 | 0.03314 | 0.29395 | |
RegenerationR5 | 3.067 | 2.396 | 0.00284 | 0.09340 | |
RegenerationR6 | 0.97 | 2.396 | 0.40239 | 0.73922 | |
RegenerationBL | -2.231 | 2.396 | 0.46288 | 0.82956 | |
RegenerationTP | 0.375 | 2.396 | 0.67542 | 1.00000 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_50746 | 169 | 3.52 | Mlig455_002815 | Neo: - Age: logFC(26M/2M)=0.391 |
TYW5 | 4 | 1.000 | 1.000 | - | - | 1.000 | 1.000 | Mlig455_002815 {REF} {Length: 1947} {TRANSSPLICED} {Pfam: Cupin-like domain [PF13621.8, score=116.6]; JmjC domain, hydroxylase [PF02373.24, score=20.1]; Cupin superfamily protein [PF08007.14, score=19.8]} {Human: ENSG00000162971, TYW5, tRNA-yW synthesizing protein 5, [RH, Score=252, Expect=9e-82]} {Mouse: ENSMUSG00000048495, Tyw5, tRNA-yW synthesizing protein 5, [RH, Score=243, Expect=2e-78]} {Dmel: FBgn0035166, CG13902, [Score=69.7, Expect=6e-13]} {Smed: dd_Smed_v6_8202_0_1, dd_Smed_v6_8202_0_1, [RH, Score=243, Expect=7e-79]} {RNA1509_22421, RNA1509_40253} {RNA1310_30547, RNA1509_22421, RNA1509_40253} {RNA1509_22421, RNA1509_40253, RNA815_8750} |
2. | MligTC455_51562 | 331 | 6.9 | Mlig455_031005 | Neo: Irradiation Age: - |
RMI1 | 1.794 | 0.825 | - | - | - | - | 0.969 | Mlig455_031005 {REF} {Length: 2426} {TRANSSPLICED} {Pfam: RecQ mediated genome instability protein [PF08585.14, score=132.5]; Recq-mediated genome instability protein 1, C-terminal OB-fold [PF16099.7, score=41.0]} {Human: ENSG00000178966, RMI1, RecQ mediated genome instability 1, [RH, Score=120, Expect=1e-28]} {Mouse: ENSMUSG00000035367, Rmi1, RecQ mediated genome instability 1, [RH, Score=115, Expect=4e-26]} {Celegans: WBGene00011576, rmh-2, RMi1 (RMI1) Homolog, [Score=67.0, Expect=3e-11]} {Smed: dd_Smed_v6_15427_0_1, dd_Smed_v6_15427_0_1, [RH, Score=97.1, Expect=7e-21]} {RNA1509_19306} {RNA1310_8212.2} {RNA815_20681} |
3. | MligTC455_28386 | 78 | 1.62 | Mlig455_068823 | Neo: - Age: logFC(26M/2M)=1.011 Region-enriched R5: 3.694/0.00017 |
1.707 | - | - | - | - | 0.953 | 0.754 | Mlig455_068823 {REF} {Length: 572} {Pfam: WSC domain [PF01822.21, score=38.2]} {RNA1509_32111} {RNA1310_40575} {RNA815_7836.1} | |
4. | MligTC455_51283 | 194 | 4.04 | Mlig455_016832 | Neo: Int S/G2/M Age: - Region-enriched R5: 3.547/0.00000 |
1.693 | - | - | - | - | 0.956 | 0.737 | Mlig455_016832 {REF} {Length: 988} {TRANSSPLICED} {Pfam: Predicted integral membrane zinc-ribbon metal-binding protein [PF10058.11, score=39.1]} {Smed: dd_Smed_v6_6045_0_1, dd_Smed_v6_6045_0_1, [Score=45.4, Expect=1e-05]} {RNA1310_42430} {RNA815_29475} | |
5. | MligTC455_35084 | 441 | 9.18 | Mlig455_022660 | Neo: - Age: - Region-specific R5: 2.748 Region-enriched R5: 2.462/0.00000 |
1.682 | 0.731 | - | - | - | 0.951 | - | Mlig455_022660 {REF} {Length: 1993} {RNA1509_8095} {RNA1310_19437} {RNA815_11004} | |
6. | MligTC455_35085 | 883 | 18.41 | Mlig455_022667, Mlig455_022678 | Neo: Int S/G2/M Age: - Region-specific R5: 2.744 Region-enriched R5: 2.542/0.00000 |
KIF14 | 1.682 | 0.731 | - | - | - | 0.951 | - | Mlig455_022667 {REF} {Length: 3885} {TRANSSPLICED} {Pfam: Kinesin motor domain [PF00225.25, score=329.0]; Microtubule binding [PF16796.7, score=65.7]} {Human: ENSG00000118193, KIF14, kinesin family member 14, [Score=362, Expect=5e-104]} {Mouse: ENSMUSG00000041498, Kif14, kinesin family member 14, [Score=360, Expect=3e-103]} {Dmel: FBgn0004374, neb, nebbish, [Score=323, Expect=6e-93]} {Celegans: WBGene00006831, unc-104, Kinesin-like protein unc-104, [Score=290, Expect=1e-80]} {Smed: dd_Smed_v6_7089_0_1, dd_Smed_v6_7089_0_1, [Score=285, Expect=3e-79]} {RNA1509_59775, RNA1509_8095} {RNA1310_2684, RNA1509_59775} {RNA1509_59775, RNA815_4220} Mlig455_022678 {REF} {Length: 3888} {TRANSSPLICED} {Pfam: Kinesin motor domain [PF00225.25, score=328.4]; Microtubule binding [PF16796.7, score=65.4]} {Human: ENSG00000118193, KIF14, kinesin family member 14, [Score=362, Expect=7e-104]} {Mouse: ENSMUSG00000041498, Kif14, kinesin family member 14, [Score=361, Expect=7e-104]} {Dmel: FBgn0004374, neb, nebbish, [Score=321, Expect=4e-92]} {Celegans: WBGene00006831, unc-104, Kinesin-like protein unc-104, [Score=291, Expect=9e-81]} {Smed: dd_Smed_v6_7089_0_1, dd_Smed_v6_7089_0_1, [Score=287, Expect=6e-80]} {RNA1509_8095} {RNA1310_2684} {RNA815_4220} |
7. | MligTC455_51284 | 191 | 3.98 | Mlig455_065926 | Neo: - Age: - Region-enriched R5: 3.454/0.00000 |
1.675 | - | - | - | - | 0.958 | 0.717 | Mlig455_065926 {REF} {Length: 902} {Pfam: Predicted integral membrane zinc-ribbon metal-binding protein [PF10058.11, score=39.1]} {Smed: dd_Smed_v6_6045_0_1, dd_Smed_v6_6045_0_1, [Score=45.4, Expect=1e-05]} {RNA1509_44716} {RNA1310_42430} {RNA815_29475} | |
8. | MligTC455_16032 | 77 | 1.61 | Mlig455_037337 | Neo: Irradiation |
0.978 | - | - | - | - | 0.978 | - | Mlig455_037337 {REF} {Length: 3079} {Pfam: Neuralized [PF07177.14, score=30.4]} {RNA1310_49372} | |
9. | MligTC455_41682 | 37 | 0.78 | Mlig455_028845 | Neo: Irradiation Age: - Regeneration-enriched R3: 8.687 |
0.977 | - | - | - | - | 0.977 | - | Mlig455_028845 {REF} {Length: 1313} {RNA1509_2172} {RNA1310_18516.1} {RNA815_7498} | |
10. | MligTC455_35039 | 56 | 1.16 | Mlig455_052486 | Neo: Int S/G2/M Age: - |
SRL | 0.967 | - | - | - | - | 0.967 | - | Mlig455_052486 {REF} {Length: 2907} {TRANSSPLICED} {Pfam: Dynamin family [PF00350.25, score=29.4]; 50S ribosome-binding GTPase [PF01926.25, score=26.6]} {Human: ENSG00000185739, SRL, sarcalumenin, [Score=52.0, Expect=1e-06]} {Mouse: ENSMUSG00000022519, Srl, sarcalumenin, [Score=51.6, Expect=1e-06]} {Smed: dd_Smed_v6_4829_0_1, dd_Smed_v6_4829_0_1, [Score=58.9, Expect=3e-09]} {RNA1509_19954, RNA1509_22741, RNA1509_24609, RNA1509_39827, RNA1509_7588} {RNA1310_22529, RNA1509_19954, RNA1509_22741, RNA1509_24609, RNA1509_39827, RNA1509_7588} {RNA1509_19954, RNA1509_22741, RNA1509_24609, RNA1509_39827, RNA1509_7588, RNA815_9813} |
11. | MligTC455_36836 | 71 | 1.47 | Mlig455_048099 | Neo: - Age: - |
0.966 | - | - | - | - | - | 0.966 | Mlig455_048099 {REF} {Length: 1394} {TRANSSPLICED} {RNA1509_58153} {RNA1310_20702.1, RNA1509_58153} {RNA1509_58153, RNA815_50889} | |
12. | MligTC455_28259 | 102 | 2.11 | Mlig455_063848 | Neo: - Age: Down-Down-Down Region-enriched R5: 2.857/0.00001 |
0.965 | - | - | - | - | 0.965 | - | Mlig455_063848 {REF} {Length: 1817} {Pfam: PMG protein [PF05287.14, score=19.3]} {RNA1509_22244} {RNA1310_14527} {RNA815_7836.1} | |
13. | MligTC455_19844 | 270 | 5.62 | Mlig455_068340 | Neo: - Age: - |
0.962 | - | - | - | - | - | 0.962 | Mlig455_068340 {REF} {Length: 348} {TRANSSPLICED} {Pfam: PET assembly of cytochrome c oxidase, mitochondrial [PF15786.7, score=45.7]} {RNA1509_28703} {RNA1310_21339} {RNA815_12138.1} | |
14. | MligTC455_34971 | 458 | 9.55 | Mlig455_025024 | Neo: - Age: Up-Down-Up Region-enriched R2: 1.994/0.04087 |
0.962 | - | - | - | - | - | 0.962 | Mlig455_025024 {REF} {Length: 1861} {TRANSSPLICED} {RNA1509_42153} {RNA1310_15720.1, RNA1509_42153} {RNA1509_42153, RNA815_7713} | |
15. | MligTC455_53596 | 145 | 3.03 | Mlig455_049664, Mlig455_052832 | Neo: - Age: - |
PEX12 | 0.96 | - | - | - | - | - | 0.960 | Mlig455_049664 {REF} {Length: 2060} {TRANSSPLICED} {Pfam: Pex2 / Pex12 amino terminal region [PF04757.16, score=81.6]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=21.9]; RING-type zinc-finger [PF13445.8, score=21.2]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=20.6]} {Human: ENSG00000108733, PEX12, peroxisomal biogenesis factor 12, [Score=103, Expect=3e-24]} {Mouse: ENSMUSG00000116064, LT629148.5, peroxisomal biosis factor 12, [Score=91.7, Expect=3e-20]; ENSMUSG00000116268, LT629154.3, peroxisomal biosis factor 12, [Score=90.9, Expect=5e-20]; ENSMUSG00000116062, LT629151.3, peroxisomal biosis factor 12, [Score=90.9, Expect=5e-20]; ENSMUSG00000018733, Pex12, peroxisomal biogenesis factor 12, [Score=90.5, Expect=6e-20]} {Celegans: WBGene00004197, prx-12, Putative peroxisome assembly protein 12, [Score=122, Expect=1e-31]} {Smed: dd_Smed_v6_8166_0_1, dd_Smed_v6_8166_0_1, [Score=110, Expect=2e-27]} {RNA1509_58179} {RNA1310_15136.2, RNA1509_58179} {RNA1509_58179, RNA815_6671} Mlig455_052832 {REF} {Length: 2179} {TRANSSPLICED} {Pfam: Pex2 / Pex12 amino terminal region [PF04757.16, score=82.2]} {Celegans: WBGene00004197, prx-12, Putative peroxisome assembly protein 12, [Score=69.7, Expect=3e-13]} {RNA1509_58179} {RNA1310_15136.2} {RNA815_6671} |
16. | MligTC455_16435 | 33 | 0.69 | Mlig455_070040 | Neo: Int S/G2/M Age: - |
0.954 | - | - | - | - | 0.954 | - | Mlig455_070040 {REF} {Length: 1149} {RNA1310_54637} {RNA815_34864} | |
17. | MligTC455_38526 | 49 | 1.02 | Mlig455_055981 | Neo: - Age: logFC(26M/2M)=0.636 Region-enriched R5: 3.806/0.01080 |
0.954 | - | - | - | - | 0.954 | - | Mlig455_055981 {REF} {Length: 2090} {RNA1509_28642} {RNA1310_45785} {RNA815_35110} | |
18. | MligTC455_50153 | 477 | 9.93 | Mlig455_061605 | Neo: - Age: - |
BDH1 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_061605 {REF} {Length: 1818} {TRANSSPLICED} {Pfam: short chain dehydrogenase [PF00106.27, score=138.9]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=92.3]; KR domain [PF08659.12, score=19.8]} {Human: ENSG00000161267, BDH1, 3-hydroxybutyrate dehydrogenase 1, [Score=170, Expect=5e-49]; ENSG00000275544, BDH1, 3-hydroxybutyrate dehydrogenase 1, [Score=170, Expect=5e-49]; ENSG00000025423, HSD17B6, hydroxysteroid 17-beta dehydrogenase 6, [Score=163, Expect=9e-47]} {Mouse: ENSMUSG00000046598, Bdh1, 3-hydroxybutyrate dehydrogenase, type 1, [Score=173, Expect=2e-50]} {Dmel: FBgn0033679, CG8888, [RH, Score=108, Expect=4e-26]} {Celegans: WBGene00000979, dhs-16, 3 beta-hydroxysteroid dehydrogenase dhs-16, [Score=135, Expect=7e-36]} {Smed: dd_Smed_v6_8012_0_1, dd_Smed_v6_8012_0_1, [RH, Score=147, Expect=5e-41]} {RNA1509_18804, RNA1509_53392} {RNA1310_15769, RNA1509_18804, RNA1509_53392} {RNA1509_18804, RNA1509_53392, RNA815_8900.1} |
19. | MligTC455_03682 | 2 | 0.05 | Mlig455_055009, Mlig455_055022 | Neo: Irradiation Age: - |
0.953 | - | - | - | - | 0.953 | - | Mlig455_055009 {REF} {Length: 1432} {Pfam: Transmembrane protein 100 [PF16311.7, score=20.3]} {RNA1509_38606} {RNA1310_24714} {RNA815_11030.1} Mlig455_055022 {REF} {Length: 1441} {Pfam: Transmembrane protein 100 [PF16311.7, score=20.3]} {RNA1509_38606} {RNA1310_24714} {RNA815_11030.1} |
|
20. | MligTC455_17261 | 51 | 1.07 | Mlig455_023588 | Neo: - Age: - Region-enriched R4: 4.071/0.02797 |
0.952 | - | - | - | - | - | 0.952 | Mlig455_023588 {REF} {Length: 1572} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=88.3]} {Smed: dd_Smed_v6_402_1_1, dd_Smed_v6_402_1_1, [Score=110, Expect=1e-31]} {RNA1509_33657, RNA1509_55820} {RNA1310_47396, RNA1509_55820} {RNA1509_55820, RNA815_24502} | |
21. | MligTC455_25943 | 2 | 0.05 | Mlig455_019439 | Neo: - |
MX2 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_019439 {REF} {Length: 2519} {Pfam: Dynamin family [PF00350.25, score=134.3]; Dynamin central region [PF01031.22, score=131.0]; 50S ribosome-binding GTPase [PF01926.25, score=27.8]; Ferrous iron transport protein B [PF02421.20, score=22.2]} {Human: ENSG00000183486, MX2, MX dynamin like GTPase 2, [Score=300, Expect=7e-91]; ENSG00000157601, MX1, MX dynamin like GTPase 1, [Score=285, Expect=1e-85]} {Mouse: ENSMUSG00000023341, Mx2, MX dynamin-like GTPase 2, [Score=281, Expect=8e-85]} {Dmel: FBgn0003392, shi, shibire, [Score=162, Expect=4e-41]} {Celegans: WBGene00001130, dyn-1, Dynamin, [Score=163, Expect=8e-42]} {Smed: dd_Smed_v6_6863_0_1, dd_Smed_v6_6863_0_1, [Score=161, Expect=3e-41]} {RNA1509_17853} {RNA1310_5329.1} {RNA815_1588.1} |
22. | MligTC455_43213 | 450 | 9.38 | Mlig455_041657 | Neo: - Age: - |
BECN1 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_041657 {REF} {Length: 3339} {TRANSSPLICED} {Pfam: Apg6 BARA domain [PF04111.14, score=136.6]; Apg6 coiled-coil region [PF17675.3, score=58.2]} {Human: ENSG00000126581, BECN1, beclin 1, [RH, Score=205, Expect=3e-60]} {Mouse: ENSMUSG00000035086, Becn1, beclin 1, autophagy related, [RH, Score=202, Expect=1e-59]} {Dmel: FBgn0264325, Atg6, Autophagy-related 6, [RH, Score=187, Expect=3e-54]} {Celegans: WBGene00000247, bec-1, Beclin homolog, [RH, Score=117, Expect=9e-29]} {Smed: dd_Smed_v6_5353_0_1, dd_Smed_v6_5353_0_1, [RH, Score=180, Expect=2e-51]} {RNA1509_16640, RNA1509_27883, RNA1509_51377} {RNA1310_18844, RNA1509_16640, RNA1509_27883, RNA1509_51377} {RNA1509_16640, RNA1509_27883, RNA1509_51377, RNA815_7657} |
23. | MligTC455_03257 | 30 | 0.63 | Mlig455_022233, Mlig455_022251 | Neo: - Age: logFC(26M/2M)=-0.575 |
0.951 | - | - | - | - | 0.951 | - | Mlig455_022233 {REF} {Length: 2715} {RNA1310_31863.1} Mlig455_022251 {REF} {Length: 2805} {RNA1310_31863.1} {RNA815_37061.1} |
|
24. | MligTC455_06256 | 1254 | 26.13 | Mlig455_007777, Mlig455_056626 | Neo: Irradiation Age: - Region-specific R5: 2.280 Region-enriched R5: 1.907/0.00000 |
0.95 | - | - | - | - | 0.950 | - | Mlig455_007777 {REF} {Length: 2314} {TRANSSPLICED} {RNA1509_51708, RNA1509_52836} {RNA1310_7103.1, RNA1509_51708, RNA1509_52836} {RNA1509_51708, RNA1509_52836, RNA815_13528} Mlig455_056626 {REF} {Length: 2325} {TRANSSPLICED} {RNA1509_37715, RNA1509_52836} {RNA1310_7103.1, RNA1509_37715} {RNA1509_37715, RNA815_13528} |