TomoSeq data search

Data search

Results for MligTC455_16716

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_16716	5	0.10	Mlig455_016129	Neo: - Age: -		Mlig455_016129 {REF} {Length: 1870} {RNA1310_142301}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_16716

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_16716

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_16716	5	0.1	Mlig455_016129	Neo: - Age: -		1	-	-	-	-	1.000	-	Mlig455_016129 {REF} {Length: 1870} {RNA1310_142301}
2.	MligTC455_16995	51	1.06	Mlig455_056516	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.868	ANKRD52	0.992	-	-	-	-	0.992	-	Mlig455_056516 {REF} {Length: 2515} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=148.3]; Ankyrin repeat [PF00023.32, score=129.9]; Ankyrin repeats (many copies) [PF13637.8, score=119.4]; Ankyrin repeat [PF13606.8, score=106.0]; Ankyrin repeats (many copies) [PF13857.8, score=98.6]} {Human: ENSG00000139645, ANKRD52, ankyrin repeat domain 52, [Score=87.8, Expect=2e-17]} {Mouse: ENSMUSG00000014498, Ankrd52, ankyrin repeat domain 52, [Score=87.0, Expect=2e-17]} {Dmel: FBgn0031675, CG9121, [Score=76.3, Expect=2e-14]} {Celegans: WBGene00007801, trpa-1, Transient receptor potential cation channel subfamily A member 1 homolog, [Score=69.3, Expect=4e-12]} {Smed: dd_Smed_v6_1704_0_1, dd_Smed_v6_1704_0_1, [Score=80.9, Expect=7e-16]} {RNA1509_32886} {RNA1310_5973} {RNA815_9930}
3.	MligTC455_27210	8	0.16	Mlig455_068156	Neo: - Age: Up-Down-Down		0.985	-	-	-	-	0.985	-	Mlig455_068156 {REF} {Length: 3525} {Pfam: Domain of unknown function (DUF3432) [PF11914.10, score=23.7]} {RNA1509_22012} {RNA1310_49079} {RNA815_25175.1}
4.	MligTC455_36567	18	0.37	Mlig455_065030	Neo: - Age: -		0.981	-	-	-	-	0.981	-	Mlig455_065030 {REF} {Length: 672}
5.	MligTC455_13571	22	0.46	Mlig455_017396	Neo: - Age: -		0.976	-	-	-	-	0.976	-	Mlig455_017396 {REF} {Length: 2929} {Pfam: Domain of unknown function (DUF4834) [PF16118.7, score=23.0]; Transmembrane protein 51 [PF15345.8, score=21.9]; RNA polymerase I-specific transcription-initiation factor [PF10214.11, score=20.8]; Ctr copper transporter family [PF04145.17, score=20.5]; ARC105 or Med15 subunit of Mediator complex non-fungal [PF09606.12, score=19.0]; Mechanosensitive ion channel inner membrane domain 1 [PF12794.9, score=17.5]} {RNA1310_13412} {RNA815_37792}
6.	MligTC455_44307	53	1.1	Mlig455_006144	Neo: - Age: - Region-enriched R2: 7.453/0.02887		0.973	-	-	-	-	0.973	-	Mlig455_006144 {REF} {Length: 1270} {Pfam: F5/8 type C domain [PF00754.27, score=27.0]} {Smed: dd_Smed_v6_46759_0_1, dd_Smed_v6_46759_0_1, [RH, Score=47.0, Expect=1e-06]} {RNA1509_2129} {RNA1310_49415} {RNA815_42540}
7.	MligTC455_13352	10	0.2	Mlig455_001562	Neo: - Age: -		0.97	-	-	-	-	0.970	-	Mlig455_001562 {REF} {Length: 2447} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=137.8]} {Smed: dd_Smed_v6_16274_0_1, dd_Smed_v6_16274_0_1, [Score=73.9, Expect=1e-13]} {RNA1310_72837}
8.	MligTC455_13326	11	0.22	Mlig455_042702	Neo: - Age: -		0.967	-	-	-	-	0.967	-	Mlig455_042702 {REF} {Length: 4591} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=136.7]} {Smed: dd_Smed_v6_37545_0_1, dd_Smed_v6_37545_0_1, [Score=56.6, Expect=2e-08]} {RNA1509_30877} {RNA1310_43502} {RNA815_38744}
9.	MligTC455_25022	32	0.66	Mlig455_006759	Neo: Int S/G2/M Age: -		0.964	-	-	-	-	0.964	-	Mlig455_006759 {REF} {Length: 776} {NoTransDecoderORF} {RNA1509_55535} {RNA1310_62687} {RNA815_43405}
10.	MligTC455_11173	11	0.23	Mlig455_016393	Neo: - Age: -		0.963	-	-	-	-	0.963	-	Mlig455_016393 {REF} {Length: 1000} {NoTransDecoderORF}
11.	MligTC455_28639	7	0.14	Mlig455_035619	Neo: - Age: -	RNF213	0.963	-	-	-	-	0.963	-	Mlig455_035619 {REF} {Length: 1364} {Human: ENSG00000173821, RNF213, ring finger protein 213, [Score=62.0, Expect=8e-10]} {Mouse: ENSMUSG00000070327, Rnf213, ring finger protein 213, [Score=64.7, Expect=8e-11]} {RNA1509_57295} {RNA1310_21.1} {RNA815_34049}
12.	MligTC455_09829	23	0.49	Mlig455_020089	Neo: - Age: Down-Up-Down		0.962	-	-	-	-	0.962	-	Mlig455_020089 {REF} {Length: 2399} {TRANSSPLICED} {RNA1310_22138} {RNA815_46507}
13.	MligTC455_38677	47	0.98	Mlig455_029182	Neo: - Age: -	B3GNT6	0.962	-	-	-	-	0.962	-	Mlig455_029182 {REF} {Length: 4720} {Pfam: Galactosyltransferase [PF01762.23, score=85.1]} {Human: ENSG00000198488, B3GNT6, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6, [Score=83.6, Expect=7e-18]; ENSG00000183778, B3GALT5, beta-1,3-galactosyltransferase 5, [Score=82.0, Expect=1e-17]; ENSG00000179913, B3GNT3, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3, [Score=82.0, Expect=6e-18]} {Mouse: ENSMUSG00000107167, Gm34653, predicted gene, 34653, [Score=82.8, Expect=7e-18]; ENSMUSG00000074004, B3gnt6, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase), [Score=81.6, Expect=2e-17]; ENSMUSG00000031803, B3gnt3, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3, [Score=80.9, Expect=3e-17]; ENSMUSG00000067370, B3galt4, UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 4, [Score=80.1, Expect=6e-17]} {Dmel: FBgn0031988, CG8668, [Score=66.6, Expect=3e-12]} {Celegans: WBGene00000270, bre-5, Beta-1,3-galactosyltransferase bre-5, [Score=64.3, Expect=3e-12]} {Smed: dd_Smed_v6_12783_0_1, dd_Smed_v6_12783_0_1, [Score=89.0, Expect=1e-20]} {RNA1509_36142} {RNA1310_18220.1} {RNA815_11143}
14.	MligTC455_01666	36	0.75	Mlig455_045381	Neo: - Age: -		0.96	-	-	-	-	0.960	-	Mlig455_045381 {REF} {Length: 293} {NoTransDecoderORF} {RNA1310_16068} {RNA815_51476}
15.	MligTC455_07088	27	0.56	Mlig455_063998	Neo: Int S/G2/M Age: -		0.96	-	-	-	-	0.960	-	Mlig455_063998 {REF} {Length: 1651} {RNA1509_7562} {RNA1310_912.3} {RNA815_4349}
16.	MligTC455_08528	31	0.66	Mlig455_014271	Neo: - Age: -		0.96	-	-	-	-	0.960	-	Mlig455_014271 {REF} {Length: 744} {NoTransDecoderORF} {RNA1509_8600} {RNA1310_31185} {RNA815_4566}
17.	MligTC455_17778	198	4.12	Mlig455_021327	Neo: - Age: -		0.96	-	-	-	-	0.960	-	Mlig455_021327 {REF} {Length: 416} {TRANSSPLICED} {RNA1509_23323} {RNA1310_114939}
18.	MligTC455_53033	178	3.71	Mlig455_005972	Neo: - Age: -		0.959	-	-	-	-	0.959	-	Mlig455_005972 {REF} {Length: 703} {NoTransDecoderORF} {RNA1310_47894} {RNA815_53305}
19.	MligTC455_20303	38	0.79	Mlig455_049383	Neo: - Age: -		0.958	-	-	-	-	0.958	-	Mlig455_049383 {REF} {Length: 4246} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=38.2]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=36.9]; Serpentine type 7TM GPCR chemoreceptor Srv [PF10323.11, score=23.7]} {RNA1509_28642} {RNA1310_30601} {RNA815_20505}
20.	MligTC455_25578	10	0.2	Mlig455_057660	Neo: - Age: -		0.958	-	-	-	-	0.958	-	Mlig455_057660 {REF} {Length: 1178}
21.	MligTC455_36069	93	1.94	Mlig455_054357	Neo: - Age: -	C17orf97	0.958	-	-	-	-	0.958	-	Mlig455_054357 {REF} {Length: 1067} {Human: ENSG00000187624, C17orf97, chromosome 17 open reading frame 97, [Score=45.8, Expect=7e-06]; ENSG00000283985, C17orf97, chromosome 17 open reading frame 97, [Score=45.8, Expect=7e-06]} {RNA1509_48416} {RNA1310_106903}
22.	MligTC455_31873	72	1.5	Mlig455_023256	Neo: - Age: logFC(26M/2M)=-0.591		0.957	-	-	-	-	0.957	-	Mlig455_023256 {REF} {Length: 3187} {RNA1509_6194} {RNA1310_2129.1} {RNA815_15794}
23.	MligTC455_49044	181	3.77	Mlig455_055888	Neo: - Age: - Region-enriched R4: 5.423/0.00960		0.957	-	-	-	-	0.957	-	Mlig455_055888 {REF} {Length: 508} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_15967} {RNA1310_39655} {RNA815_17269}
24.	MligTC455_28163	18	0.37	Mlig455_055128	Neo: - Age: Up-Down-Down		0.956	-	-	-	-	0.956	-	Mlig455_055128 {REF} {Length: 11152} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=117.8]; Endonuclease-reverse transcriptase [PF14529.8, score=73.1]} {RNA1509_15631} {RNA1310_751} {RNA815_166}
25.	MligTC455_17976	81	1.68	Mlig455_002059	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_002059 {REF} {Length: 730} {RNA1310_56725} {RNA815_29666}
26.	MligTC455_29939	51	1.06	Mlig455_033991	Neo: - Age: Up-Down-Up	ERCC4	0.955	-	-	-	-	0.955	-	Mlig455_033991 {REF} {Length: 6659} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=105.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=97.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=84.9]; ERCC4 domain [PF02732.17, score=62.3]; Integrase zinc binding domain [PF17921.3, score=59.8]; Integrase core domain [PF00665.28, score=54.3]; H2C2 zinc finger [PF09337.12, score=19.6]; Integrase core domain [PF13683.8, score=18.3]} {Human: ENSG00000175595, ERCC4, ERCC excision repair 4, endonuclease catalytic subunit, [Score=390, Expect=4e-116]} {Mouse: ENSMUSG00000022545, Ercc4, excision repair cross-complementing rodent repair deficiency, complementation group 4, [RH, Score=391, Expect=7e-117]} {Dmel: FBgn0002707, mei-9, meiotic 9, [RH, Score=343, Expect=1e-99]} {Celegans: WBGene00008140, xpf-1, (Xeroderma Pigmentosum group F) DNA repair gene homolog, [RH, Score=176, Expect=1e-44]} {Smed: dd_Smed_v6_15639_0_2, dd_Smed_v6_15639_0_2, [Score=347, Expect=3e-102]} {RNA1509_11359} {RNA1310_617} {RNA815_3663}
27.	MligTC455_11904	34	0.71	Mlig455_052381, Mlig455_064133	Neo: - Age: Up-Down-Up		0.954	-	-	-	-	0.954	-	Mlig455_052381 {REF} {Length: 6581} {RNA1509_49721} {RNA1310_18098} {RNA815_61989} Mlig455_064133 {REF} {Length: 5051} {RNA1509_49721} {RNA1310_18098} {RNA815_61989}
28.	MligTC455_32523	45	0.93	Mlig455_057683	Neo: - Age: Down-Down-Up	NR2E1	0.954	-	-	-	-	0.954	-	Mlig455_057683 {REF} {Length: 3117} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=84.9]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=46.7]} {Human: ENSG00000112333, NR2E1, nuclear receptor subfamily 2 group E member 1, [RH, Score=201, Expect=4e-60]} {Mouse: ENSMUSG00000019803, Nr2e1, nuclear receptor subfamily 2, group E, member 1, [RH, Score=199, Expect=7e-60]} {Dmel: FBgn0003720, tll, tailless, [Score=165, Expect=2e-46]} {Celegans: WBGene00003657, nhr-67, Nuclear hormone receptor family member nhr-67, [Score=151, Expect=2e-41]} {Smed: dd_Smed_v6_21347_0_1, dd_Smed_v6_21347_0_1, [Score=152, Expect=3e-42]} {RNA1509_22720} {RNA1310_16022, RNA1509_22720} {RNA1509_22720, RNA815_25885}
29.	MligTC455_54779	98	2.04	Mlig455_000311	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_000311 {REF} {Length: 220} {NoTransDecoderORF} {RNA1310_52315}
30.	MligTC455_23974	18	0.38	Mlig455_022922, Mlig455_055203	Neo: - Age: Up-Down-Down, logFC(26M/2M)=0.700		0.953	-	-	-	-	0.953	-	Mlig455_022922 {REF} {Length: 1992} {RNA1509_39040} {RNA1310_886.1, RNA1509_39040} {RNA1509_39040, RNA815_4579} Mlig455_055203 {REF} {Length: 1177} {RNA1509_39040} {RNA1310_24363} {RNA815_4579}
31.	MligTC455_37809	28	0.58	Mlig455_053421	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_053421 {REF} {Length: 1283} {RNA1509_44223} {RNA1310_90388} {RNA815_47782}
32.	MligTC455_37302	147	3.06	Mlig455_045440	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.423	ERBB4	0.952	-	-	-	-	0.952	-	Mlig455_045440 {REF} {Length: 6977} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=295.2]; Protein kinase domain [PF00069.27, score=137.6]; Growth factor receptor domain IV [PF14843.8, score=52.8]; Receptor L domain [PF01030.26, score=51.1]; Furin-like cysteine rich region [PF00757.22, score=49.4]} {Human: ENSG00000178568, ERBB4, erb-b2 receptor tyrosine kinase 4, [RH, Score=371, Expect=1e-106]} {Mouse: ENSMUSG00000020122, Egfr, epidermal growth factor receptor, [RH, Score=358, Expect=1e-102]} {Dmel: FBgn0003731, Egfr, Epidermal growth factor receptor, [RH, Score=507, Expect=1e-154]} {Celegans: WBGene00002299, let-23, Receptor tyrosine-protein kinase let-23, [RH, Score=414, Expect=2e-121]} {Smed: dd_Smed_v6_11310_0_1, dd_Smed_v6_11310_0_1, [RH, Score=508, Expect=2e-154]} {RNA1509_34534, RNA1509_42246, RNA1509_56287} {RNA1310_674, RNA1509_34534, RNA1509_42246, RNA1509_56287} {RNA1509_34534, RNA1509_42246, RNA1509_56287, RNA815_2089}
33.	MligTC455_47464	9	0.19	Mlig455_028514	Neo: - Age: -	SULT1C3	0.952	-	-	-	-	0.952	-	Mlig455_028514 {REF} {Length: 2299} {Pfam: Sulfotransferase domain [PF00685.29, score=210.2]; Sulfotransferase family [PF13469.8, score=36.9]} {Human: ENSG00000196228, SULT1C3, sulfotransferase family 1C member 3, [RH, Score=199, Expect=1e-61]; ENSG00000198075, SULT1C4, sulfotransferase family 1C member 4, [RH, Score=194, Expect=2e-59]; ENSG00000198203, SULT1C2, sulfotransferase family 1C member 2, [RH, Score=190, Expect=5e-58]} {Mouse: ENSMUSG00000023122, Sult1c2, sulfotransferase family, cytosolic, 1C, member 2, [RH, Score=197, Expect=5e-61]} {Dmel: FBgn0037665, St2, Sulfotransferase 2, [RH, Score=140, Expect=8e-39]} {Celegans: WBGene00013748, ssu-1, Suppressor of Stomatin mutant Uncoordination, [Score=111, Expect=2e-27]} {Smed: dd_Smed_v6_38079_0_1, dd_Smed_v6_38079_0_1, [RH, Score=274, Expect=2e-91]} {RNA1310_78121} {RNA815_43226}
34.	MligTC455_27679	168	3.49	Mlig455_059443	Neo: - Age: -	GOLPH3	0.95	-	-	-	-	0.950	-	Mlig455_059443 {REF} {Length: 2464} {TRANSSPLICED} {Pfam: Golgi phosphoprotein 3 (GPP34) [PF05719.13, score=180.2]} {Human: ENSG00000113384, GOLPH3, golgi phosphoprotein 3, [RH, Score=355, Expect=4e-123]} {Mouse: ENSMUSG00000022200, Golph3, golgi phosphoprotein 3, [RH, Score=352, Expect=5e-122]} {Dmel: FBgn0267378, sau, sauron, [Score=344, Expect=6e-119]} {Celegans: WBGene00021644, Y47G6A.18, [Score=323, Expect=5e-111]} {Smed: dd_Smed_v6_1770_0_2, dd_Smed_v6_1770_0_2, [Score=340, Expect=6e-118]} {RNA1310_29186} {RNA815_27407}