M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_13571

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_13571 22 0.46 Mlig455_017396

Neo: -

Age: -

 Mlig455_017396 {REF} {Length: 2929} {Pfam: Domain of unknown function (DUF4834) [PF16118.7, score=23.0]; Transmembrane protein 51 [PF15345.8, score=21.9]; RNA polymerase I-specific transcription-initiation factor [PF10214.11, score=20.8]; Ctr copper transporter family [PF04145.17, score=20.5]; ARC105 or Med15 subunit of Mediator complex non-fungal [PF09606.12, score=19.0]; Mechanosensitive ion channel inner membrane domain 1 [PF12794.9, score=17.5]} {RNA1310_13412} {RNA815_37792}

Cumulative graph for MligTC455_13571

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.18 0.921 0.99976 1.00000
RegionR2 -0.418 0.921 0.85976 1.00000
RegionR3 1.078 0.921 0.49948 0.99425
RegionR4 2.051 0.921 0.99968 1.00000
RegionR5 1.222 0.921 0.35180 0.70149
RegionR6 -1.461 0.921 0.99981 1.00000
RegionR7 -1.346 0.921 0.99986 1.00000
RegionR8 0.052 0.921 0.99983 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.559 0.921 1.00000 1.00000
RegenerationR2 1.2 0.921 0.29684 0.73924
RegenerationR3 0.008 0.921 0.71388 0.95305
RegenerationR4 0.507 0.921 0.50299 0.87082
RegenerationR5 0.477 0.921 0.93455 1.00000
RegenerationR6 -0.323 0.921 0.74290 0.94851
RegenerationBL -1.651 0.921 1.00000 1.00000
RegenerationTP -1.591 0.921 0.99990 1.00000


Genes with expression patterns similar to MligTC455_13571

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_13571 22 0.46 Mlig455_017396

Neo: -

Age: -

 3 - - 1.000 1.000 1.000 - Mlig455_017396 {REF} {Length: 2929} {Pfam: Domain of unknown function (DUF4834) [PF16118.7, score=23.0]; Transmembrane protein 51 [PF15345.8, score=21.9]; RNA polymerase I-specific transcription-initiation factor [PF10214.11, score=20.8]; Ctr copper transporter family [PF04145.17, score=20.5]; ARC105 or Med15 subunit of Mediator complex non-fungal [PF09606.12, score=19.0]; Mechanosensitive ion channel inner membrane domain 1 [PF12794.9, score=17.5]} {RNA1310_13412} {RNA815_37792}
2. MligTC455_13572 23 0.47 Mlig455_017474

Neo: -

Age: -

 2.935 - - 0.993 0.965 0.977 - Mlig455_017474 {REF} {Length: 2992} {RNA1310_13412} {RNA815_21127}
3. MligTC455_17976 81 1.68 Mlig455_002059

Neo: -

Age: -

 1.868 - - 0.977 - 0.891 - Mlig455_002059 {REF} {Length: 730} {RNA1310_56725} {RNA815_29666}
4. MligTC455_05913 13 0.28 Mlig455_064325, Mlig455_064355

Neo: -

Age: -

 1.759 - - 0.985 0.774 - -

Mlig455_064325 {REF} {Length: 2163} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=137.7]} {RNA1509_19020} {RNA1310_13852} {RNA815_7058}

Mlig455_064355 {REF} {Length: 470} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=33.1]} {RNA1509_19020} {RNA1310_13852} {RNA815_7058}
5. MligTC455_38839 18 0.37 Mlig455_067019

Neo: -

Age: -

 1.733 - - 0.968 - 0.765 - Mlig455_067019 {REF} {Length: 1403} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=59.4]; Capsular polysaccharide synthesis protein [PF05704.14, score=18.6]} {Smed: dd_Smed_v6_42389_0_1, dd_Smed_v6_42389_0_1, [RH, Score=141, Expect=1e-38]} {RNA1310_19511} {RNA815_7578}
6. MligTC455_32278 31 0.65 Mlig455_041080

Neo: -

Age: Up-Down-Down

 USH2A 1.694 - - 0.985 - 0.709 - Mlig455_041080 {REF} {Length: 15804} {Pfam: Fibronectin type III domain [PF00041.23, score=464.0]; Laminin EGF domain [PF00053.26, score=197.5]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=110.9]; Laminin G domain [PF02210.26, score=79.7]; Laminin G domain [PF00054.25, score=43.4]; Fibronectin type III domain [PF16893.7, score=43.3]; Chitinase A, N-terminal domain [PF08329.12, score=22.2]; Concanavalin A-like lectin/glucanases superfamily [PF13385.8, score=20.5]} {Human: ENSG00000042781, USH2A, usherin, [Score=1148, Expect=0.0]} {Mouse: ENSMUSG00000026609, Ush2a, usherin, [Score=1111, Expect=0.0]} {Dmel: FBgn0261563, wb, wing blister, [Score=265, Expect=7e-70]} {Celegans: WBGene00001328, epi-1, Laminin-like protein epi-1, [Score=267, Expect=1e-70]} {Smed: dd_Smed_v6_7924_0_5, dd_Smed_v6_7924_0_5, [Score=229, Expect=2e-59]} {RNA1509_43154} {RNA1310_15599} {RNA815_35868}
7. MligTC455_37837 39 0.81 Mlig455_060764

Neo: -

Age: -

 1.683 - - 0.956 0.727 - - Mlig455_060764 {REF} {Length: 489} {NoTransDecoderORF} {RNA1310_49408} {RNA815_26583}
8. MligTC455_16667 20 0.42 Mlig455_040694, Mlig455_064563

Neo: -

Age: -

 1.681 - - 0.953 - 0.728 -

Mlig455_040694 {REF} {Length: 1748} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=18.9]} {Smed: dd_Smed_v6_29877_0_1, dd_Smed_v6_29877_0_1, [Score=79.3, Expect=3e-16]} {RNA1310_144465}

Mlig455_064563 {REF} {Length: 2190} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=20.3]} {Smed: dd_Smed_v6_29877_0_1, dd_Smed_v6_29877_0_1, [Score=78.6, Expect=6e-16]} {RNA1310_118049}
9. MligTC455_08037 13 0.27 Mlig455_037418, Mlig455_037484

Neo: -

Age: -

 CHRNB2, HTR3E 1.67 - - 0.956 - 0.714 -

Mlig455_037418 {REF} {Length: 1268} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=102.4]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=75.2]} {Human: ENSG00000160716, CHRNB2, cholinergic receptor nicotinic beta 2 subunit, [Score=129, Expect=3e-32]; ENSG00000186038, HTR3E, 5-hydroxytryptamine receptor 3E, [Score=128, Expect=3e-32]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=127, Expect=2e-31]; ENSG00000178084, HTR3C, 5-hydroxytryptamine receptor 3C, [Score=126, Expect=2e-31]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=125, Expect=4e-31]; ENSG00000166736, HTR3A, 5-hydroxytryptamine receptor 3A, [Score=124, Expect=7e-31]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=123, Expect=3e-30]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=130, Expect=5e-33]; ENSMUSG00000027950, Chrnb2, cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal), [Score=127, Expect=6e-32]; ENSMUSG00000041189, Chrnb1, cholinergic receptor, nicotinic, beta polypeptide 1 (muscle), [Score=124, Expect=1e-30]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=137, Expect=3e-35]} {Celegans: WBGene00017580, lgc-4, Ligand-gated ion channel 4, [Score=142, Expect=1e-36]} {Smed: dd_Smed_v6_31300_0_1, dd_Smed_v6_31300_0_1, [Score=134, Expect=2e-34]} {RNA1509_53098} {RNA1310_100091} {RNA815_45198}

Mlig455_037484 {REF} {Length: 1840} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=99.8]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=75.2]} {Human: ENSG00000186038, HTR3E, 5-hydroxytryptamine receptor 3E, [Score=129, Expect=9e-33]; ENSG00000178084, HTR3C, 5-hydroxytryptamine receptor 3C, [Score=127, Expect=7e-32]; ENSG00000160716, CHRNB2, cholinergic receptor nicotinic beta 2 subunit, [Score=127, Expect=7e-32]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=127, Expect=1e-31]; ENSG00000166736, HTR3A, 5-hydroxytryptamine receptor 3A, [Score=125, Expect=4e-31]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=125, Expect=9e-31]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=130, Expect=4e-33]; ENSMUSG00000027950, Chrnb2, cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal), [Score=127, Expect=1e-31]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=135, Expect=1e-34]} {Celegans: WBGene00001133, eat-2, Neuronal acetylcholine receptor subunit eat-2, [Score=137, Expect=5e-36]} {Smed: dd_Smed_v6_31300_0_1, dd_Smed_v6_31300_0_1, [Score=130, Expect=2e-33]} {RNA1509_53098} {RNA1310_100091} {RNA815_45198}
10. MligTC455_20303 38 0.79 Mlig455_049383

Neo: -

Age: -

 1.655 - - 0.701 - 0.954 - Mlig455_049383 {REF} {Length: 4246} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=38.2]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=36.9]; Serpentine type 7TM GPCR chemoreceptor Srv [PF10323.11, score=23.7]} {RNA1509_28642} {RNA1310_30601} {RNA815_20505}
11. MligTC455_37391 23 0.47 Mlig455_028202, Mlig455_039425, Mlig455_045479, Mlig455_056344

Neo: -

Age: -

 0.995 - - 0.995 - - -

Mlig455_028202 {REF} {Length: 764} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=30.5]} {RNA1310_17986} {RNA815_61383}

Mlig455_039425 {REF} {Length: 905} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=30.5]} {RNA1310_17986} {RNA815_61383}

Mlig455_045479 {REF} {Length: 764} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=30.5]} {RNA1310_17986} {RNA815_61383}

Mlig455_056344 {REF} {Length: 707} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=30.6]} {RNA1310_17986} {RNA815_61383}
12. MligTC455_43193 359 7.49 Mlig455_033211

Neo: -

Age: -

 0.987 - - 0.987 - - - Mlig455_033211 {REF} {Length: 280} {NoTransDecoderORF} {RNA1310_121983}
13. MligTC455_08017 5 0.11 Mlig455_027000

Neo: -

Age: -

 0.985 - - 0.985 - - - Mlig455_027000 {REF} {Length: 1360} {TRANSSPLICED} {RNA1310_47153} {RNA815_22265}
14. MligTC455_09290 23 0.48 Mlig455_057456

Neo: -

Age: -

 0.985 - - 0.985 - - - Mlig455_057456 {REF} {Length: 350} {NoTransDecoderORF} {RNA1310_95940}
15. MligTC455_13098 19 0.4 Mlig455_020992

Neo: -

Age: -

 C1GALT1 0.985 - - 0.985 - - - Mlig455_020992 {REF} {Length: 1108} {Pfam: Galactosyltransferase [PF01762.23, score=27.6]} {Human: ENSG00000106392, C1GALT1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, [Score=160, Expect=3e-46]} {Mouse: ENSMUSG00000042460, C1galt1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1, [Score=162, Expect=1e-46]} {Dmel: FBgn0032078, C1GalTA, Core 1 Galactosyltransferase A, [Score=138, Expect=8e-38]} {Celegans: WBGene00008019, C38H2.2, Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, [Score=165, Expect=4e-48]} {Smed: dd_Smed_v6_4310_0_1, dd_Smed_v6_4310_0_1, [Score=185, Expect=3e-56]} {RNA1310_125941}
16. MligTC455_13832 178 3.71 Mlig455_065431

Neo: -

Age: -

 0.985 - - 0.985 - - - Mlig455_065431 {REF} {Length: 1865} {NoTransDecoderORF} {RNA1509_9010} {RNA1310_38702, RNA1509_9010} {RNA1509_9010, RNA815_4929.1}
17. MligTC455_15805 9 0.19 Mlig455_023117

Neo: -

Age: -

 KCNK18 0.985 - - 0.985 - - - Mlig455_023117 {REF} {Length: 1703} {Pfam: Ion channel [PF07885.18, score=119.1]} {Human: ENSG00000186795, KCNK18, potassium two pore domain channel subfamily K member 18, [Score=101, Expect=6e-23]; ENSG00000100433, KCNK10, potassium two pore domain channel subfamily K member 10, [Score=96.3, Expect=1e-20]} {Mouse: ENSMUSG00000040901, Kcnk18, potassium channel, subfamily K, member 18, [Score=103, Expect=7e-24]} {Dmel: FBgn0085425, CG34396, [Score=155, Expect=3e-40]} {Celegans: WBGene00010784, twk-48, TWiK family of potassium channels, [Score=155, Expect=1e-42]} {Smed: dd_Smed_v6_17586_0_1, dd_Smed_v6_17586_0_1, [Score=338, Expect=1e-112]} {RNA1310_118169}
18. MligTC455_24089 12 0.25 Mlig455_018092

Neo: -

Age: -

 0.985 - - 0.985 - - - Mlig455_018092 {REF} {Length: 2904} {RNA1509_43825} {RNA1310_93759} {RNA815_63754}
19. MligTC455_28894 69 1.44 Mlig455_012699, Mlig455_033012

Neo: -

Age: -

 NPEPL1 0.985 - - - 0.985 - -

Mlig455_012699 {REF} {Length: 3546} {Pfam: Cytosol aminopeptidase family, catalytic domain [PF00883.23, score=200.7]; DNA polymerase type B, organellar and viral [PF03175.15, score=34.2]} {Human: ENSG00000215440, NPEPL1, aminopeptidase like 1, [Score=84.0, Expect=5e-16]; ENSG00000002549, LAP3, leucine aminopeptidase 3, [Score=81.6, Expect=2e-15]} {Mouse: ENSMUSG00000039682, Lap3, leucine aminopeptidase 3, [Score=83.2, Expect=5e-16]; ENSMUSG00000039263, Npepl1, aminopeptidase-like 1, [Score=82.0, Expect=2e-15]} {Dmel: FBgn0000454, Dip-B, Dipeptidase B, [Score=352, Expect=4e-110]} {Celegans: WBGene00002250, lap-2, Putative aminopeptidase W07G4.4, [Score=356, Expect=2e-111]} {Smed: dd_Smed_v6_181_0_1, dd_Smed_v6_181_0_1, [Score=411, Expect=1e-132]} {RNA1509_51792} {RNA1310_13397} {RNA815_10168}

Mlig455_033012 {REF} {Length: 2047} {TRANSSPLICED} {Pfam: Cytosol aminopeptidase family, catalytic domain [PF00883.23, score=203.2]} {Human: ENSG00000215440, NPEPL1, aminopeptidase like 1, [Score=84.0, Expect=1e-16]; ENSG00000002549, LAP3, leucine aminopeptidase 3, [Score=81.6, Expect=7e-16]} {Mouse: ENSMUSG00000039682, Lap3, leucine aminopeptidase 3, [Score=83.2, Expect=1e-16]; ENSMUSG00000039263, Npepl1, aminopeptidase-like 1, [Score=82.4, Expect=3e-16]} {Dmel: FBgn0000454, Dip-B, Dipeptidase B, [Score=354, Expect=4e-117]} {Celegans: WBGene00002250, lap-2, Putative aminopeptidase W07G4.4, [Score=350, Expect=1e-115]} {Smed: dd_Smed_v6_181_0_1, dd_Smed_v6_181_0_1, [Score=396, Expect=2e-133]} {RNA1509_51792} {RNA1310_13397} {RNA815_10168}
20. MligTC455_35643 13 0.28 Mlig455_034753

Neo: -

Age: -

 NPY4R2 0.985 - - 0.985 - - - Mlig455_034753 {REF} {Length: 2924} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=87.0]} {Human: ENSG00000264717, NPY4R2, neuropeptide Y receptor Y4-2, [Score=99.0, Expect=3e-22]; ENSG00000204174, NPY4R, neuropeptide Y receptor Y4, [Score=95.9, Expect=4e-21]} {Mouse: ENSMUSG00000048337, Npy4r, neuropeptide Y receptor Y4, [Score=112, Expect=5e-27]} {Dmel: FBgn0037408, NPFR, Neuropeptide F receptor, [Score=128, Expect=2e-32]} {Celegans: WBGene00016110, npr-11, Putative neuropeptide Y receptor 11, [Score=125, Expect=1e-31]} {Smed: dd_Smed_v6_16725_0_1, dd_Smed_v6_16725_0_1, [Score=194, Expect=1e-56]} {RNA1310_122559.1}
21. MligTC455_37338 40 0.84 Mlig455_035280

Neo: -

Age: -

 0.985 - - 0.985 - - - Mlig455_035280 {REF} {Length: 2442} {RNA1310_17149} {RNA815_15957}
22. MligTC455_37917 34 0.71 Mlig455_070471

Neo: -

Age: -

 0.985 - - 0.985 - - - Mlig455_070471 {REF} {Length: 638} {NoTransDecoderORF} {RNA1310_105024}
23. MligTC455_20008 45 0.95 Mlig455_016377

Neo: -

Age: -

 0.984 - - 0.984 - - - Mlig455_016377 {REF} {Length: 2038} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=148.2]} {Celegans: WBGene00012116, del-4, DEgenerin Like, [Score=58.5, Expect=6e-09]} {Smed: dd_Smed_v6_15195_0_1, dd_Smed_v6_15195_0_1, [Score=52.4, Expect=4e-07]} {RNA1310_87656}
24. MligTC455_14145 21 0.44 Mlig455_019525

Neo: -

Age: -

 0.982 - - 0.982 - - - Mlig455_019525 {REF} {Length: 589} {RNA1310_32376.1} {RNA815_45036}
25. MligTC455_32523 45 0.93 Mlig455_057683

Neo: -

Age: Down-Down-Up

 NR2E1 0.982 - - - - 0.982 - Mlig455_057683 {REF} {Length: 3117} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=84.9]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=46.7]} {Human: ENSG00000112333, NR2E1, nuclear receptor subfamily 2 group E member 1, [RH, Score=201, Expect=4e-60]} {Mouse: ENSMUSG00000019803, Nr2e1, nuclear receptor subfamily 2, group E, member 1, [RH, Score=199, Expect=7e-60]} {Dmel: FBgn0003720, tll, tailless, [Score=165, Expect=2e-46]} {Celegans: WBGene00003657, nhr-67, Nuclear hormone receptor family member nhr-67, [Score=151, Expect=2e-41]} {Smed: dd_Smed_v6_21347_0_1, dd_Smed_v6_21347_0_1, [Score=152, Expect=3e-42]} {RNA1509_22720} {RNA1310_16022, RNA1509_22720} {RNA1509_22720, RNA815_25885}
26. MligTC455_49929 76 1.59 Mlig455_001249, Mlig455_001253

Neo: -

Age: Down-Up-Up

 0.982 - - 0.982 - - -

Mlig455_001249 {REF} {Length: 984} {RNA1310_33799.1} {RNA815_47109}

Mlig455_001253 {REF} {Length: 1260} {RNA1310_33799.1} {RNA815_45980}
27. MligTC455_36567 18 0.37 Mlig455_065030

Neo: -

Age: -

 0.981 - - - - 0.981 - Mlig455_065030 {REF} {Length: 672}
28. MligTC455_18700 19 0.4 Mlig455_003655

Neo: -

Age: -

 0.979 - - 0.979 - - - Mlig455_003655 {REF} {Length: 471} {NoTransDecoderORF} {RNA1310_85204}
29. MligTC455_45851 33 0.69 Mlig455_020386

Neo: -

Age: -

 0.979 - - 0.979 - - - Mlig455_020386 {REF} {Length: 590} {RNA1509_48193} {RNA1310_97125}
30. MligTC455_27149 162 3.38 Mlig455_010166

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-2.585

Region-enriched R3: 5.671/0.00012
Region-enriched R2: 4.829/0.04858

 0.977 - - 0.977 - - - Mlig455_010166 {REF} {Length: 595} {RNA1509_40054} {RNA1310_45578.1} {RNA815_7257.5}
31. MligTC455_16716 5 0.1 Mlig455_016129

Neo: -

Age: -

 0.976 - - - - 0.976 - Mlig455_016129 {REF} {Length: 1870} {RNA1310_142301}
32. MligTC455_34332 28 0.59 Mlig455_005058

Neo: -

Age: -

 NKX3-2 0.976 - - 0.976 - - - Mlig455_005058 {REF} {Length: 1884} {Pfam: Homeodomain [PF00046.31, score=68.8]} {Human: ENSG00000109705, NKX3-2, NK3 homeobox 2, [RH, Score=118, Expect=4e-29]} {Mouse: ENSMUSG00000049691, Nkx3-2, NK3 homeobox 2, [RH, Score=118, Expect=2e-29]} {Dmel: FBgn0004862, bap, bagpipe, [RH, Score=115, Expect=7e-28]} {Celegans: WBGene00003377, mls-2, Mesodermal Lineage Specification, [Score=90.9, Expect=7e-20]} {Smed: dd_Smed_v6_34285_0_1, dd_Smed_v6_34285_0_1, [RH, Score=94.0, Expect=4e-23]}
33. MligTC455_34333 29 0.59 Mlig455_005256

Neo: -

Age: -

 NKX3-2 0.976 - - 0.976 - - - Mlig455_005256 {REF} {Length: 1971} {Pfam: Homeodomain [PF00046.31, score=68.8]} {Human: ENSG00000109705, NKX3-2, NK3 homeobox 2, [RH, Score=119, Expect=3e-29]} {Mouse: ENSMUSG00000049691, Nkx3-2, NK3 homeobox 2, [RH, Score=119, Expect=2e-29]} {Dmel: FBgn0004862, bap, bagpipe, [RH, Score=115, Expect=5e-28]} {Celegans: WBGene00003377, mls-2, Mesodermal Lineage Specification, [Score=89.7, Expect=2e-19]} {Smed: dd_Smed_v6_34285_0_1, dd_Smed_v6_34285_0_1, [RH, Score=94.0, Expect=4e-23]}
34. MligTC455_52122 1435 29.9 Mlig455_035226, Mlig455_035273

Neo: -

Age: -

Region-enriched R3: 3.936/0.00000
Region-enriched R2: 3.858/0.00018

 0.976 - - 0.976 - - -

Mlig455_035226 {REF} {Length: 725} {TRANSSPLICED} {RNA1509_39421} {RNA1310_8553.2, RNA1509_39421} {RNA1509_39421, RNA815_2974.1}

Mlig455_035273 {REF} {Length: 1422} {RNA1509_24257, RNA1509_39421} {RNA1310_8553.2, RNA1509_24257} {RNA1509_24257, RNA815_2974.1}
35. MligTC455_20239 14 0.29 Mlig455_054378

Neo: -

Age: -

 0.975 - - - - 0.975 - Mlig455_054378 {REF} {Length: 1875} {RNA1509_52273} {RNA1310_84069} {RNA815_52433}
36. MligTC455_49469 65 1.35 Mlig455_016236

Neo: -

Age: -

Region-enriched R3: 5.774/0.00000

 B3GNT5 0.975 - - 0.975 - - - Mlig455_016236 {REF} {Length: 2696} {Pfam: Galactosyltransferase [PF01762.23, score=91.0]} {Human: ENSG00000176597, B3GNT5, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5, [Score=100, Expect=1e-22]} {Mouse: ENSMUSG00000034780, B3galt1, UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1, [Score=86.3, Expect=3e-18]; ENSMUSG00000043300, B3galnt1, UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 1, [Score=83.2, Expect=4e-17]} {Dmel: FBgn0000221, brn, brainiac, [Score=77.0, Expect=3e-15]} {Celegans: WBGene00044630, bus-17, Hexosyltransferase, [RH, Score=65.5, Expect=2e-11]} {Smed: dd_Smed_v6_13702_0_1, dd_Smed_v6_13702_0_1, [RH, Score=171, Expect=5e-49]} {RNA1509_54587, RNA1509_56943} {RNA1310_18654, RNA1509_54587, RNA1509_56943} {RNA1509_54587, RNA1509_56943, RNA815_8083}
37. MligTC455_19966 28 0.59 Mlig455_007419

Neo: -

Age: Up-Down-Down

 0.971 - - 0.971 - - - Mlig455_007419 {REF} {Length: 1601} {NoTransDecoderORF} {RNA1509_51785} {RNA1310_77392} {RNA815_14770.1}
38. MligTC455_29464 25 0.53 Mlig455_021892

Neo: -

Age: -

 SDCCAG8 0.969 - - 0.969 - - - Mlig455_021892 {REF} {Length: 3036} {Pfam: Centrosomal colon cancer autoantigen protein family [PF15964.7, score=164.7]} {Human: ENSG00000276111, SDCCAG8, serologically defined colon cancer antigen 8, [RH, Score=120, Expect=2e-27]; ENSG00000054282, SDCCAG8, serologically defined colon cancer antigen 8, [RH, Score=120, Expect=2e-27]} {Mouse: ENSMUSG00000026504, Sdccag8, serologically defined colon cancer antigen 8, [RH, Score=109, Expect=4e-24]} {Dmel: FBgn0266566, CG45105, [Score=52.4, Expect=2e-06]} {Smed: dd_Smed_v6_9295_0_2, dd_Smed_v6_9295_0_2, [RH, Score=87.8, Expect=7e-18]} {RNA1509_42574} {RNA1310_5942.1} {RNA815_9353.1}
39. MligTC455_12878 91 1.89 Mlig455_025598, Mlig455_052895

Neo: -

Age: -

 0.968 - - 0.968 - - -

Mlig455_025598 {REF} {Length: 345} {NoTransDecoderORF} {RNA1310_75777}

Mlig455_052895 {REF} {Length: 467} {NoTransDecoderORF} {RNA1310_75777}
40. MligTC455_23974 18 0.38 Mlig455_022922, Mlig455_055203

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=0.700

 0.968 - - - - 0.968 -

Mlig455_022922 {REF} {Length: 1992} {RNA1509_39040} {RNA1310_886.1, RNA1509_39040} {RNA1509_39040, RNA815_4579}

Mlig455_055203 {REF} {Length: 1177} {RNA1509_39040} {RNA1310_24363} {RNA815_4579}
41. MligTC455_27131 3362 70.04 Mlig455_010170

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.893

Region-enriched R3: 6.424/0.00000
Region-enriched R2: 5.578/0.00015

 0.968 - - 0.968 - - - Mlig455_010170 {REF} {Length: 578} {RNA1509_3816} {RNA1310_105811} {RNA815_7257.6}
42. MligTC455_36995 217 4.52 Mlig455_040359

Neo: -

Age: Down-Up-Up

Region-enriched R2: 6.534/0.00155
Region-enriched R3: 5.197/0.00130

 0.968 - - 0.968 - - - Mlig455_040359 {REF} {Length: 759} {RNA1509_59636} {RNA1310_6145.1, RNA1509_59636} {RNA1509_59636, RNA815_27612}
43. MligTC455_41673 26 0.54 Mlig455_035834

Neo: -

Age: -

 0.968 - - 0.968 - - - Mlig455_035834 {REF} {Length: 1561} {NoTransDecoderORF} {RNA1310_64046} {RNA815_37581}
44. MligTC455_16509 21 0.44 Mlig455_017525, Mlig455_019044

Neo: -

Age: Up-Down-Up

 0.966 - - 0.966 - - -

Mlig455_017525 {REF} {Length: 792} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=88.9]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=57.2]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=43.3]; Integrase core domain [PF00665.28, score=27.3]; gag-polyprotein putative aspartyl protease [PF13975.8, score=25.7]; Retroviral aspartyl protease [PF00077.22, score=22.3]; Aspartyl protease [PF13650.8, score=22.1]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=229, Expect=1e-64]} {RNA1509_46846} {RNA1310_8296} {RNA815_40201}

Mlig455_019044 {REF} {Length: 3591} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=88.9]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=57.2]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=43.3]; Integrase core domain [PF00665.28, score=27.3]; gag-polyprotein putative aspartyl protease [PF13975.8, score=25.7]; Retroviral aspartyl protease [PF00077.22, score=22.3]; Aspartyl protease [PF13650.8, score=22.1]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=229, Expect=1e-64]} {RNA1509_46846} {RNA1310_8296, RNA1509_46846} {RNA1509_46846, RNA815_22609}
45. MligTC455_18746 23 0.47 Mlig455_024831

Neo: -

Age: -

Region-enriched R4: 8.220/0.00001

Regeneration-depleted R4: -6.352
Regeneration-depleted R3: -3.721
Regeneration-depleted R2: -1.825

 0.966 - - 0.966 - - - Mlig455_024831 {REF} {Length: 1230} {Smed: dd_Smed_v6_500_0_1, dd_Smed_v6_500_0_1, [Score=52.0, Expect=1e-07]} {RNA1509_9302} {RNA1310_672.1} {RNA815_6919}
46. MligTC455_52917 35 0.74 Mlig455_038643

Neo: -

Age: -

 0.966 - - 0.966 - - - Mlig455_038643 {REF} {Length: 4209} {NoTransDecoderORF} {RNA1509_49908} {RNA1310_28346} {RNA815_54494}
47. MligTC455_27210 8 0.16 Mlig455_068156

Neo: -

Age: Up-Down-Down

 0.964 - - - - 0.964 - Mlig455_068156 {REF} {Length: 3525} {Pfam: Domain of unknown function (DUF3432) [PF11914.10, score=23.7]} {RNA1509_22012} {RNA1310_49079} {RNA815_25175.1}
48. MligTC455_13352 10 0.2 Mlig455_001562

Neo: -

Age: -

 0.962 - - - - 0.962 - Mlig455_001562 {REF} {Length: 2447} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=137.8]} {Smed: dd_Smed_v6_16274_0_1, dd_Smed_v6_16274_0_1, [Score=73.9, Expect=1e-13]} {RNA1310_72837}
49. MligTC455_26560 105 2.19 Mlig455_003441, Mlig455_003442

Neo: -

Age: Up-Down-Up

 0.96 - - 0.960 - - -

Mlig455_003441 {REF} {Length: 208} {NoTransDecoderORF} {RNA1509_55741} {RNA1310_25713} {RNA815_46472}

Mlig455_003442 {REF} {Length: 3255} {TRANSSPLICED} {RNA1509_47214} {RNA1310_12534} {RNA815_19912}
50. MligTC455_43407 35 0.73 Mlig455_021194

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.275

 TRAF5 0.959 - - - - 0.959 - Mlig455_021194 {REF} {Length: 2878} {Pfam: TRAF-type zinc finger [PF02176.20, score=48.0]; Seven in absentia protein family [PF03145.18, score=20.5]} {Human: ENSG00000082512, TRAF5, TNF receptor associated factor 5, [Score=200, Expect=6e-56]} {Mouse: ENSMUSG00000026637, Traf5, TNF receptor-associated factor 5, [Score=141, Expect=3e-35]; ENSMUSG00000111385, Traf5, TNF receptor-associated factor 5, [Score=141, Expect=3e-35]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [Score=101, Expect=2e-22]} {Celegans: WBGene00006612, trf-1, TNF Receptor Associated Factor (TRAF) homolog; TRF-1, [Score=93.2, Expect=6e-20]} {Smed: dd_Smed_v6_3837_0_1, dd_Smed_v6_3837_0_1, [Score=113, Expect=1e-26]} {RNA1509_32223} {RNA1310_24731} {RNA815_3096.1}
51. MligTC455_43686 326 6.79 Mlig455_022166, Mlig455_055777

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.570

Region-enriched R3: 6.671/0.00000
Region-enriched R2: 5.224/0.01307

 0.959 - - 0.959 - - -

Mlig455_022166 {REF} {Length: 612} {RNA1310_23536} {RNA815_45816}

Mlig455_055777 {REF} {Length: 584} {RNA1310_23536} {RNA815_45816}
52. MligTC455_48760 15 0.31 Mlig455_009006

Neo: -

Age: -

 SULT1A1 0.959 - - 0.959 - - - Mlig455_009006 {REF} {Length: 1306} {Pfam: Sulfotransferase domain [PF00685.29, score=204.1]; Sulfotransferase family [PF13469.8, score=33.6]} {Human: ENSG00000196502, SULT1A1, sulfotransferase family 1A member 1, [RH, Score=162, Expect=4e-47]} {Mouse: ENSMUSG00000029269, Sult1b1, sulfotransferase family 1B, member 1, [RH, Score=167, Expect=8e-49]} {Dmel: FBgn0037665, St2, Sulfotransferase 2, [Score=131, Expect=4e-35]} {Celegans: WBGene00013748, ssu-1, Suppressor of Stomatin mutant Uncoordination, [Score=108, Expect=2e-26]} {Smed: dd_Smed_v6_34919_0_1, dd_Smed_v6_34919_0_1, [RH, Score=276, Expect=2e-91]} {RNA1310_95833}
53. MligTC455_26038 13 0.26 Mlig455_026530

Neo: -

Age: Up-Down-Up

 0.958 - - - - 0.958 - Mlig455_026530 {REF} {Length: 9189} {Pfam: Transcription factor BRX N-terminal domain [PF13713.8, score=20.0]} {RNA1509_12133} {RNA1310_11930} {RNA815_40541}
54. MligTC455_16995 51 1.06 Mlig455_056516

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.868

 ANKRD52 0.957 - - - - 0.957 - Mlig455_056516 {REF} {Length: 2515} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=148.3]; Ankyrin repeat [PF00023.32, score=129.9]; Ankyrin repeats (many copies) [PF13637.8, score=119.4]; Ankyrin repeat [PF13606.8, score=106.0]; Ankyrin repeats (many copies) [PF13857.8, score=98.6]} {Human: ENSG00000139645, ANKRD52, ankyrin repeat domain 52, [Score=87.8, Expect=2e-17]} {Mouse: ENSMUSG00000014498, Ankrd52, ankyrin repeat domain 52, [Score=87.0, Expect=2e-17]} {Dmel: FBgn0031675, CG9121, [Score=76.3, Expect=2e-14]} {Celegans: WBGene00007801, trpa-1, Transient receptor potential cation channel subfamily A member 1 homolog, [Score=69.3, Expect=4e-12]} {Smed: dd_Smed_v6_1704_0_1, dd_Smed_v6_1704_0_1, [Score=80.9, Expect=7e-16]} {RNA1509_32886} {RNA1310_5973} {RNA815_9930}
55. MligTC455_19796 59 1.22 Mlig455_022720

Neo: -

Age: Up-Up-Up, logFC(26M/2M)=1.691

Region-enriched R4: 4.274/0.04456

 0.957 - - 0.957 - - - Mlig455_022720 {REF} {Length: 1270} {RNA1310_22076} {RNA815_30973}
56. MligTC455_32422 37 0.78 Mlig455_031348

Neo: -

Age: -

 CHRNA6 0.956 - - 0.956 - - - Mlig455_031348 {REF} {Length: 1659} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=69.7]} {Human: ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=61.6, Expect=5e-10]; ENSG00000160716, CHRNB2, cholinergic receptor nicotinic beta 2 subunit, [Score=61.2, Expect=8e-10]} {Mouse: ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=61.2, Expect=5e-10]; ENSMUSG00000027950, Chrnb2, cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal), [Score=60.8, Expect=8e-10]; ENSMUSG00000055026, Gabrg3, gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3, [Score=58.5, Expect=4e-09]} {Dmel: FBgn0000038, nAChRbeta1, nicotinic Acetylcholine Receptor beta1, [Score=48.5, Expect=4e-06]} {Celegans: WBGene00000057, acr-18, AcetylCholine Receptor; Acetylcholine receptor, one of nine alpha a7-like nicotinic acetylcholine receptor subunits (58.6 kD) (Acr-18), [Score=63.5, Expect=5e-11]} {Smed: dd_Smed_v6_30253_0_1, dd_Smed_v6_30253_0_1, [Score=59.3, Expect=6e-10]} {RNA1310_61084} {RNA815_48984}
57. MligTC455_26561 64 1.32 Mlig455_070940

Neo: -

Age: -

 0.955 - - 0.955 - - - Mlig455_070940 {REF} {Length: 1652} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF3096) [PF11295.10, score=23.9]} {RNA1509_55741} {RNA1310_34586} {RNA815_56684}
58. MligTC455_34641 301 6.27 Mlig455_027038

Neo: -

Age: -

 ATP2A1 0.953 - - 0.953 - - - Mlig455_027038 {REF} {Length: 4352} {TRANSSPLICED} {Pfam: E1-E2 ATPase [PF00122.22, score=191.8]; Cation transporting ATPase, C-terminus [PF00689.23, score=146.4]; Cation transport ATPase (P-type) [PF13246.8, score=76.4]; haloacid dehalogenase-like hydrolase [PF00702.28, score=73.8]; Cation transporter/ATPase, N-terminus [PF00690.28, score=67.0]; haloacid dehalogenase-like hydrolase [PF12710.9, score=30.5]; haloacid dehalogenase-like hydrolase [PF08282.14, score=30.2]} {Human: ENSG00000196296, ATP2A1, ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, [RH, Score=1462, Expect=0.0]; ENSG00000174437, ATP2A2, ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, [RH, Score=1446, Expect=0.0]; ENSG00000074370, ATP2A3, ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, [RH, Score=1403, Expect=0.0]} {Mouse: ENSMUSG00000030730, Atp2a1, ATPase, Ca++ transporting, cardiac muscle, fast twitch 1, [RH, Score=1456, Expect=0.0]; ENSMUSG00000029467, Atp2a2, ATPase, Ca++ transporting, cardiac muscle, slow twitch 2, [RH, Score=1450, Expect=0.0]; ENSMUSG00000020788, Atp2a3, ATPase, Ca++ transporting, ubiquitous, [RH, Score=1404, Expect=0.0]} {Dmel: FBgn0263006, SERCA, Sarco/endoplasmic reticulum Ca(2+)-ATPase, [RH, Score=1493, Expect=0.0]} {Celegans: WBGene00004736, sca-1, Calcium-transporting ATPase, [RH, Score=1466, Expect=0.0]} {Smed: dd_Smed_v6_1772_0_1, dd_Smed_v6_1772_0_1, [RH, Score=1613, Expect=0.0]} {RNA1509_20343} {RNA1310_3029.1} {RNA815_2104.2}
59. MligTC455_51653 188 3.92 Mlig455_026873, Mlig455_030823, Mlig455_047794

Neo: -

Age: Down-Up-Down

 DNASE1L1 0.953 - - 0.953 - - -

Mlig455_026873 {REF} {Length: 2133} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=36.6]} {Human: ENSG00000013563, DNASE1L1, deoxyribonuclease 1 like 1, [RH, Score=167, Expect=5e-49]} {Mouse: ENSMUSG00000024136, Dnase1l2, deoxyribonuclease 1-like 2, [RH, Score=171, Expect=4e-51]} {RNA1310_32296.1} {RNA815_27566}

Mlig455_030823 {REF} {Length: 2074} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=37.1]} {Human: ENSG00000013563, DNASE1L1, deoxyribonuclease 1 like 1, [RH, Score=167, Expect=2e-49]} {Mouse: ENSMUSG00000024136, Dnase1l2, deoxyribonuclease 1-like 2, [RH, Score=171, Expect=1e-51]} {RNA1310_32296.2} {RNA815_27566}

Mlig455_047794 {REF} {Length: 1791} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=35.6]} {Human: ENSG00000013563, DNASE1L1, deoxyribonuclease 1 like 1, [RH, Score=166, Expect=2e-48]} {Mouse: ENSMUSG00000024136, Dnase1l2, deoxyribonuclease 1-like 2, [RH, Score=171, Expect=3e-51]} {RNA1310_32296.2} {RNA815_27566}
60. MligTC455_52678 24 0.5 Mlig455_052449

Neo: -

Age: -

 0.953 - - 0.953 - - - Mlig455_052449 {REF} {Length: 2321} {RNA1509_25982} {RNA1310_586.2} {RNA815_3003}
61. MligTC455_11015 19 0.4 Mlig455_010464

Neo: -

Age: Up-Down-Up

 0.952 - - 0.952 - - - Mlig455_010464 {REF} {Length: 1551} {RNA1310_22199.1} {RNA815_10412}
62. MligTC455_52861 31 0.64 Mlig455_049513

Neo: -

Age: -

 GNAO1 0.951 - - 0.951 - - - Mlig455_049513 {REF} {Length: 3228} {Pfam: G-protein alpha subunit [PF00503.22, score=252.5]; ADP-ribosylation factor family [PF00025.23, score=43.6]; Rad17 P-loop domain [PF03215.17, score=22.1]; AAA ATPase domain [PF13191.8, score=19.2]} {Human: ENSG00000087258, GNAO1, G protein subunit alpha o1, [Score=152, Expect=4e-40]; ENSG00000114353, GNAI2, G protein subunit alpha i2, [Score=147, Expect=2e-38]} {Mouse: ENSMUSG00000032562, Gnai2, guanine nucleotide binding protein (G protein), alpha inhibiting 2, [Score=149, Expect=2e-39]; ENSMUSG00000031748, Gnao1, guanine nucleotide binding protein, alpha O, [Score=149, Expect=2e-39]; ENSMUSG00000057614, Gnai1, guanine nucleotide binding protein (G protein), alpha inhibiting 1, [Score=143, Expect=4e-37]; ENSMUSG00000000001, Gnai3, guanine nucleotide binding protein (G protein), alpha inhibiting 3, [Score=142, Expect=1e-36]} {Dmel: FBgn0001104, Galphai, G protein alpha i subunit, [Score=150, Expect=1e-39]} {Celegans: WBGene00001677, gpa-15, Guanine nucleotide-binding protein alpha-15 subunit, [Score=156, Expect=4e-42]} {Smed: dd_Smed_v6_22522_0_2, dd_Smed_v6_22522_0_2, [RH, Score=231, Expect=9e-69]} {RNA1509_23459} {RNA1310_51930} {RNA815_22610}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA