Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_16926 | 1129 | 23.52 | Mlig455_046223 | Neo: - Age: - |
DARS | Mlig455_046223 {REF} {Length: 3094} {TRANSSPLICED} {Pfam: tRNA synthetases class II (D, K and N) [PF00152.22, score=256.9]; OB-fold nucleic acid binding domain [PF01336.27, score=30.9]; tRNA synthetases class II core domain (F) [PF01409.22, score=20.0]} {Human: ENSG00000115866, DARS, aspartyl-tRNA synthetase, [RH, Score=637, Expect=0.0]} {Mouse: ENSMUSG00000026356, Dars, aspartyl-tRNA synthetase, [RH, Score=642, Expect=0.0]} {Dmel: FBgn0002069, AspRS, Aspartyl-tRNA synthetase, [RH, Score=647, Expect=0.0]} {Celegans: WBGene00001094, dars-1, Aspartate--tRNA ligase, cytoplasmic, [RH, Score=635, Expect=0.0]} {Smed: dd_Smed_v6_2962_0_1, dd_Smed_v6_2962_0_1, [RH, Score=531, Expect=0.0]} {RNA1509_11128, RNA1509_23524, RNA1509_37471, RNA1509_40985, RNA1509_42643, RNA1509_59772} {RNA1310_9865, RNA1509_11128, RNA1509_23524, RNA1509_37471, RNA1509_40985, RNA1509_42643, RNA1509_59772} {RNA1509_11128, RNA1509_23524, RNA1509_37471, RNA1509_40985, RNA1509_42643, RNA1509_59772, RNA815_3815} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -0.013 | 4.763 | 0.98348 | 1.00000 | |
RegionR2 | 0.225 | 4.763 | 0.57030 | 0.93071 | |
RegionR3 | 0.109 | 4.763 | 0.70372 | 1.00000 | |
RegionR4 | -0.895 | 4.763 | 0.01254 | 0.07216 | |
RegionR5 | 0.637 | 4.763 | 0.00901 | 0.05355 | |
RegionR6 | -0.283 | 4.763 | 0.34565 | 0.93155 | |
RegionR7 | 0.682 | 4.763 | 0.05256 | 0.44078 | |
RegionR8 | -0.461 | 4.763 | 0.37079 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | 0.925 | 4.763 | 0.41240 | 1.00000 | |
RegenerationR2 | 0.011 | 4.763 | 0.98161 | 1.00000 | |
RegenerationR3 | 0.607 | 4.763 | 0.09837 | 0.50161 | |
RegenerationR4 | 0.503 | 4.763 | 0.17466 | 0.61305 | |
RegenerationR5 | 0.477 | 4.763 | 0.13289 | 0.54108 | |
RegenerationR6 | 1.232 | 4.763 | 0.00096 | 0.03360 | |
RegenerationBL | 1.088 | 4.763 | 0.01338 | 0.11951 | |
RegenerationTP | 0.12 | 4.763 | 0.80986 | 1.00000 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_16926 | 1129 | 23.52 | Mlig455_046223 | Neo: - Age: - |
DARS | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_046223 {REF} {Length: 3094} {TRANSSPLICED} {Pfam: tRNA synthetases class II (D, K and N) [PF00152.22, score=256.9]; OB-fold nucleic acid binding domain [PF01336.27, score=30.9]; tRNA synthetases class II core domain (F) [PF01409.22, score=20.0]} {Human: ENSG00000115866, DARS, aspartyl-tRNA synthetase, [RH, Score=637, Expect=0.0]} {Mouse: ENSMUSG00000026356, Dars, aspartyl-tRNA synthetase, [RH, Score=642, Expect=0.0]} {Dmel: FBgn0002069, AspRS, Aspartyl-tRNA synthetase, [RH, Score=647, Expect=0.0]} {Celegans: WBGene00001094, dars-1, Aspartate--tRNA ligase, cytoplasmic, [RH, Score=635, Expect=0.0]} {Smed: dd_Smed_v6_2962_0_1, dd_Smed_v6_2962_0_1, [RH, Score=531, Expect=0.0]} {RNA1509_11128, RNA1509_23524, RNA1509_37471, RNA1509_40985, RNA1509_42643, RNA1509_59772} {RNA1310_9865, RNA1509_11128, RNA1509_23524, RNA1509_37471, RNA1509_40985, RNA1509_42643, RNA1509_59772} {RNA1509_11128, RNA1509_23524, RNA1509_37471, RNA1509_40985, RNA1509_42643, RNA1509_59772, RNA815_3815} |
2. | MligTC455_18813 | 571 | 11.9 | Mlig455_065129 | Neo: - Age: - |
HACD2 | 2.546 | - | - | 0.768 | 0.961 | - | 0.817 | Mlig455_065129 {REF} {Length: 1405} {TRANSSPLICED} {Pfam: Protein tyrosine phosphatase-like protein, PTPLA [PF04387.16, score=198.0]} {Human: ENSG00000206527, HACD2, 3-hydroxyacyl-CoA dehydratase 2, [RH, Score=197, Expect=6e-63]} {Mouse: ENSMUSG00000035376, Hacd2, 3-hydroxyacyl-CoA dehydratase 2, [RH, Score=199, Expect=6e-64]} {Dmel: FBgn0032394, CG6746, [RH, Score=146, Expect=3e-43]} {Celegans: WBGene00020517, hpo-8, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase hpo-8, [RH, Score=178, Expect=2e-56]} {Smed: dd_Smed_v6_1743_0_1, dd_Smed_v6_1743_0_1, [RH, Score=157, Expect=3e-48]} {RNA1509_8698} {RNA1310_23405.1, RNA1509_8698} {RNA1509_8698, RNA815_24657} |
3. | MligTC455_30097 | 144 | 2.99 | Mlig455_006797 | Neo: Irradiation Age: logFC(26M/2M)=0.471 Region-enriched R5: 4.017/0.00000 |
FGFR3 | 2.468 | - | - | 0.705 | 0.952 | - | 0.811 | Mlig455_006797 {REF} {Length: 4185} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=260.4]; Protein kinase domain [PF00069.27, score=122.4]; Immunoglobulin domain [PF13927.8, score=34.4]; Immunoglobulin domain [PF13895.8, score=30.5]; Immunoglobulin domain [PF00047.27, score=26.6]; Immunoglobulin domain [PF18452.3, score=26.1]; Immunoglobulin I-set domain [PF07679.18, score=23.7]; Immunoglobulin V-set domain [PF07686.19, score=20.2]} {Human: ENSG00000068078, FGFR3, fibroblast growth factor receptor 3, [RH, Score=232, Expect=8e-64]; ENSG00000077782, FGFR1, fibroblast growth factor receptor 1, [RH, Score=224, Expect=2e-61]; ENSG00000160867, FGFR4, fibroblast growth factor receptor 4, [RH, Score=221, Expect=8e-60]} {Mouse: ENSMUSG00000054252, Fgfr3, fibroblast growth factor receptor 3, [RH, Score=230, Expect=3e-63]; ENSMUSG00000031565, Fgfr1, fibroblast growth factor receptor 1, [RH, Score=224, Expect=2e-61]; ENSMUSG00000005320, Fgfr4, fibroblast growth factor receptor 4, [RH, Score=219, Expect=1e-59]} {Dmel: FBgn0010389, htl, heartless, [RH, Score=222, Expect=3e-61]} {Celegans: WBGene00001184, egl-15, Myoblast growth factor receptor egl-15, [RH, Score=231, Expect=7e-63]} {Smed: dd_Smed_v6_11024_0_2, dd_Smed_v6_11024_0_2, [RH, Score=220, Expect=9e-60]} {RNA1509_21574} {RNA1310_2106.2} {RNA815_2648} |
4. | MligTC455_32845 | 1108 | 23.08 | Mlig455_045530 | Neo: - Age: logFC(26M/2M)=0.181 |
XPNPEP1 | 1.807 | - | 0.825 | - | 0.982 | - | - | Mlig455_045530 {REF} {Length: 2956} {TRANSSPLICED} {Pfam: Metallopeptidase family M24 [PF00557.26, score=141.0]; Creatinase/Prolidase N-terminal domain [PF16189.7, score=105.5]; Creatinase/Prolidase N-terminal domain [PF01321.20, score=85.5]; C-terminal region of peptidase_M24 [PF16188.7, score=79.8]} {Human: ENSG00000108039, XPNPEP1, X-prolyl aminopeptidase 1, [RH, Score=540, Expect=0.0]} {Mouse: ENSMUSG00000025027, Xpnpep1, X-prolyl aminopeptidase (aminopeptidase P) 1, soluble, [RH, Score=534, Expect=0.0]} {Dmel: FBgn0026150, ApepP, Aminopeptidase P, [RH, Score=457, Expect=2e-154]} {Celegans: WBGene00000155, app-1, Xaa-Pro aminopeptidase app-1, [RH, Score=439, Expect=4e-147]} {Smed: dd_Smed_v6_4029_0_1, dd_Smed_v6_4029_0_1, [RH, Score=493, Expect=2e-168]} {RNA1509_11288, RNA1509_17092, RNA1509_20213, RNA1509_28257, RNA1509_49860, RNA1509_50061} {RNA1310_14022.2, RNA1509_11288, RNA1509_17092, RNA1509_20213, RNA1509_28257, RNA1509_49860, RNA1509_50061} {RNA1509_11288, RNA1509_17092, RNA1509_20213, RNA1509_28257, RNA1509_49860, RNA1509_50061, RNA815_8183.1} |
5. | MligTC455_50646 | 258 | 5.37 | Mlig455_069118 | Neo: - Age: - |
SCYL1 | 1.695 | - | - | 0.743 | 0.952 | - | - | Mlig455_069118 {REF} {Length: 3667} {TRANSSPLICED} {Pfam: HEAT repeat [PF02985.24, score=41.4]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=37.1]; HEAT repeats [PF13646.8, score=32.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=27.4]; Protein kinase domain [PF00069.27, score=25.0]} {Human: ENSG00000142186, SCYL1, SCY1 like pseudokinase 1, [RH, Score=446, Expect=1e-144]} {Mouse: ENSMUSG00000024941, Scyl1, SCY1-like 1 (S. cerevisiae), [RH, Score=445, Expect=3e-144]} {Dmel: FBgn0260990, yata, [RH, Score=518, Expect=6e-172]} {Celegans: WBGene00012337, W07G4.3, [RH, Score=409, Expect=9e-131]} {Smed: dd_Smed_v6_3470_0_1, dd_Smed_v6_3470_0_1, [RH, Score=461, Expect=2e-152]} {RNA1509_23084} {RNA1310_4140} {RNA815_4060} |
6. | MligTC455_19102 | 165 | 3.44 | Mlig455_025633 | Neo: - Age: - |
DAXX | 1.675 | 0.717 | - | 0.958 | - | - | - | Mlig455_025633 {REF} {Length: 5839} {TRANSSPLICED} {Human: ENSG00000227046, DAXX, death domain associated protein, [Score=106, Expect=4e-23]; ENSG00000206206, DAXX, death domain associated protein, [Score=106, Expect=4e-23]; ENSG00000206279, DAXX, death domain associated protein, [Score=106, Expect=4e-23]; ENSG00000204209, DAXX, death domain associated protein, [Score=106, Expect=4e-23]; ENSG00000231617, DAXX, death domain associated protein, [Score=106, Expect=4e-23]} {Mouse: ENSMUSG00000002307, Daxx, Fas death domain-associated protein, [Score=112, Expect=4e-25]} {Dmel: FBgn0031820, Daxx, Daxx-like protein, [Score=76.3, Expect=7e-14]} {Smed: dd_Smed_v6_12059_0_8, dd_Smed_v6_12059_0_8, [RH, Score=110, Expect=5e-25]} {RNA1509_25153} {RNA1310_8826} {RNA815_18101} |
7. | MligTC455_20669 | 66 | 1.37 | Mlig455_002412, Mlig455_060169 | Neo: - Age: - |
0.977 | - | - | - | 0.977 | - | - | Mlig455_002412 {REF} {Length: 519} {NoTransDecoderORF} {RNA1509_18177} {RNA1310_98164} {RNA815_37766} Mlig455_060169 {REF} {Length: 1514} {Pfam: Family of unknown function (DUF5641) [PF18701.3, score=103.1]} {Smed: dd_Smed_v6_22202_0_1, dd_Smed_v6_22202_0_1, [Score=62.4, Expect=2e-12]} {RNA1509_18177} {RNA1310_519} {RNA815_37766} |
|
8. | MligTC455_21510 | 195 | 4.06 | Mlig455_048307 | Neo: Int S/G2/M Age: - |
0.964 | - | - | 0.964 | - | - | - | Mlig455_048307 {REF} {Length: 1947} {RNA1509_43144} {RNA1310_9878} {RNA815_24669} | |
9. | MligTC455_48118 | 768 | 15.99 | Mlig455_004272, Mlig455_004343, Mlig455_004355 | Neo: - Age: - |
RNF146 | 0.962 | - | - | - | 0.962 | - | - | Mlig455_004272 {REF} {Length: 1784} {TRANSSPLICED} {Pfam: WWE domain [PF02825.22, score=53.0]; Ring finger domain [PF13639.8, score=28.7]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=25.7]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=22.0]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.9]} {Human: ENSG00000118518, RNF146, ring finger protein 146, [RH, Score=149, Expect=3e-42]} {Mouse: ENSMUSG00000038876, Rnf146, ring finger protein 146, [RH, Score=149, Expect=3e-42]} {Dmel: FBgn0036897, CG8786, [RH, Score=151, Expect=2e-42]} {Celegans: WBGene00008330, C55A6.1, [RH, Score=115, Expect=5e-31]} {Smed: dd_Smed_v6_5084_0_1, dd_Smed_v6_5084_0_1, [RH, Score=127, Expect=1e-36]} {RNA1509_19424} {RNA1310_29204} {RNA815_48170} Mlig455_004343 {REF} {Length: 1767} {TRANSSPLICED} {Pfam: WWE domain [PF02825.22, score=53.4]; Ring finger domain [PF13639.8, score=28.7]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=25.7]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=21.9]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.9]} {Human: ENSG00000118518, RNF146, ring finger protein 146, [RH, Score=149, Expect=3e-42]} {Mouse: ENSMUSG00000038876, Rnf146, ring finger protein 146, [RH, Score=149, Expect=3e-42]} {Dmel: FBgn0036897, CG8786, [RH, Score=153, Expect=3e-43]} {Celegans: WBGene00008330, C55A6.1, [RH, Score=114, Expect=2e-30]} {Smed: dd_Smed_v6_5084_0_1, dd_Smed_v6_5084_0_1, [RH, Score=127, Expect=1e-36]} {RNA1509_19424, RNA1509_40915} {RNA1310_29204, RNA1509_19424, RNA1509_40915} {RNA1509_19424, RNA1509_40915, RNA815_43590} Mlig455_004355 {REF} {Length: 1404} {Pfam: WWE domain [PF02825.22, score=23.2]} {Dmel: FBgn0036897, CG8786, [Score=54.7, Expect=3e-08]} {RNA1509_19424} {RNA1310_29204} {RNA815_43590} |
10. | MligTC455_35712 | 307 | 6.39 | Mlig455_070315 | Neo: Irradiation Age: - Region-enriched R5: 1.516/0.00118 |
ZC3HC1 | 0.957 | - | - | - | 0.957 | - | - | Mlig455_070315 {REF} {Length: 2604} {Pfam: C3HC zinc finger-like [PF07967.15, score=75.8]; Rsm1-like [PF08600.12, score=43.0]} {Human: ENSG00000091732, ZC3HC1, zinc finger C3HC-type containing 1, [RH, Score=79.3, Expect=2e-15]} {Mouse: ENSMUSG00000039130, Zc3hc1, zinc finger, C3HC type 1, [RH, Score=83.6, Expect=6e-17]} {RNA1509_24591, RNA1509_48673} {RNA1310_19146, RNA1509_24591} {RNA1509_24591, RNA815_7920} |
11. | MligTC455_44906 | 530 | 11.05 | Mlig455_007278, Mlig455_007296, Mlig455_031831 | Neo: - Age: - Region-enriched R3: 2.840/0.00511 |
GLIPR2 | 0.953 | - | - | - | 0.953 | - | - | Mlig455_007278 {REF} {Length: 2338} {Pfam: Cysteine-rich secretory protein family [PF00188.28, score=102.7]} {Human: ENSG00000122694, GLIPR2, GLI pathogenesis related 2, [Score=97.8, Expect=2e-23]} {Mouse: ENSMUSG00000028480, Glipr2, GLI pathogenesis-related 2, [Score=100, Expect=1e-24]} {Dmel: FBgn0054049, CG34049, [Score=101, Expect=9e-24]} {Celegans: WBGene00007398, C07A4.3, [Score=68.2, Expect=4e-13]} {Smed: dd_Smed_v6_2081_0_1, dd_Smed_v6_2081_0_1, [Score=145, Expect=4e-39]} {RNA1509_31104} {RNA1310_10783} {RNA815_20378} Mlig455_007296 {REF} {Length: 2231} {Pfam: Cysteine-rich secretory protein family [PF00188.28, score=104.8]} {Human: ENSG00000122694, GLIPR2, GLI pathogenesis related 2, [Score=102, Expect=3e-25]} {Mouse: ENSMUSG00000028480, Glipr2, GLI pathogenesis-related 2, [Score=105, Expect=2e-26]} {Dmel: FBgn0054049, CG34049, [Score=97.1, Expect=4e-22]} {Celegans: WBGene00007398, C07A4.3, [Score=72.8, Expect=1e-14]} {Smed: dd_Smed_v6_2081_0_1, dd_Smed_v6_2081_0_1, [Score=144, Expect=8e-39]} {RNA1509_31104, RNA1509_45698, RNA1509_49245} {RNA1310_10783, RNA1509_45698, RNA1509_49245} {RNA1509_45698, RNA1509_49245, RNA815_20378} Mlig455_031831 {REF} {Length: 1609} {Pfam: Cysteine-rich secretory protein family [PF00188.28, score=51.1]} {Human: ENSG00000122694, GLIPR2, GLI pathogenesis related 2, [Score=85.5, Expect=1e-19]} {Mouse: ENSMUSG00000028480, Glipr2, GLI pathogenesis-related 2, [Score=81.3, Expect=3e-18]} {Dmel: FBgn0054049, CG34049, [Score=87.8, Expect=1e-19]} {Celegans: WBGene00007398, C07A4.3, [Score=67.8, Expect=3e-13]} {Smed: dd_Smed_v6_2081_0_1, dd_Smed_v6_2081_0_1, [Score=120, Expect=3e-31]} {RNA1509_31104} {RNA1310_10783} {RNA815_20378} |
12. | MligTC455_52270 | 496 | 10.34 | Mlig455_042014 | Neo: - Age: - |
LONP1 | 0.953 | - | - | - | 0.953 | - | - | Mlig455_042014 {REF} {Length: 4054} {TRANSSPLICED} {Pfam: Lon protease (S16) C-terminal proteolytic domain [PF05362.15, score=219.0]; ATP-dependent protease La (LON) substrate-binding domain [PF02190.18, score=96.2]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=85.0]; Subunit ChlI of Mg-chelatase [PF13541.8, score=40.2]; AAA domain (dynein-related subfamily) [PF07728.16, score=36.3]; AAA domain (Cdc48 subfamily) [PF07724.16, score=32.4]; AAA ATPase domain [PF13191.8, score=28.7]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=26.3]; AAA domain [PF13401.8, score=23.5]; PrkA AAA domain [PF08298.13, score=22.9]; AAA domain [PF13173.8, score=20.9]; MoxR domain in the MoxR-vWA-beta-propeller ternary systems [PF20030.1, score=19.2]} {Human: ENSG00000196365, LONP1, lon peptidase 1, mitochondrial, [RH, Score=1087, Expect=0.0]} {Mouse: ENSMUSG00000041168, Lonp1, lon peptidase 1, mitochondrial, [RH, Score=1100, Expect=0.0]} {Dmel: FBgn0036892, Lon, Lon protease, [RH, Score=1037, Expect=0.0]} {Celegans: WBGene00016391, lonp-1, Lon protease homolog, mitochondrial, [RH, Score=890, Expect=0.0]} {Smed: dd_Smed_v6_3971_0_1, dd_Smed_v6_3971_0_1, [RH, Score=1079, Expect=0.0]} {RNA1509_14560, RNA1509_51563} {RNA1310_4395, RNA1509_51563} {RNA1509_51563, RNA815_653} |
13. | MligTC455_34870 | 270 | 5.62 | Mlig455_041547 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.034/0.03828 |
CDC26 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_041547 {REF} {Length: 1228} {TRANSSPLICED} {Pfam: Anaphase-promoting complex APC subunit CDC26 [PF10471.11, score=28.4]} {Human: ENSG00000176386, CDC26, cell division cycle 26, [Score=45.4, Expect=2e-07]} {Mouse: ENSMUSG00000066149, Cdc26, cell division cycle 26, [Score=44.7, Expect=2e-07]} {RNA1509_31363, RNA1509_45270} {RNA1310_28541.2, RNA1509_31363, RNA1509_45270} {RNA1509_31363, RNA1509_45270, RNA815_19141.1} |
14. | MligTC455_25576 | 466 | 9.71 | Mlig455_024668 | Neo: - Age: Down-Up-Up |
ADCK1 | 0.951 | 0.951 | - | - | - | - | - | Mlig455_024668 {REF} {Length: 1971} {TRANSSPLICED} {Pfam: ABC1 atypical kinase-like domain [PF03109.18, score=252.7]; Protein kinase domain [PF00069.27, score=18.3]} {Human: ENSG00000063761, ADCK1, aarF domain containing kinase 1, [RH, Score=425, Expect=4e-144]} {Mouse: ENSMUSG00000021044, Adck1, aarF domain containing kinase 1, [RH, Score=419, Expect=5e-142]} {Dmel: FBgn0035039, Adck, aarF domain containing kinase, [RH, Score=387, Expect=8e-130]} {Celegans: WBGene00008410, D2023.6, [RH, Score=367, Expect=8e-122]} {Smed: dd_Smed_v6_14585_0_1, dd_Smed_v6_14585_0_1, [RH, Score=354, Expect=1e-116]} {RNA1509_42731} {RNA1310_8701, RNA1509_42731} {RNA1509_42731, RNA815_13502} |