Data search
Results for MligTC455_52270
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_52270 | 496 | 10.34 | Mlig455_042014 | Neo: - Age: - |
LONP1 | Mlig455_042014 {REF} {Length: 4054} {TRANSSPLICED} {Pfam: Lon protease (S16) C-terminal proteolytic domain [PF05362.15, score=219.0]; ATP-dependent protease La (LON) substrate-binding domain [PF02190.18, score=96.2]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=85.0]; Subunit ChlI of Mg-chelatase [PF13541.8, score=40.2]; AAA domain (dynein-related subfamily) [PF07728.16, score=36.3]; AAA domain (Cdc48 subfamily) [PF07724.16, score=32.4]; AAA ATPase domain [PF13191.8, score=28.7]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=26.3]; AAA domain [PF13401.8, score=23.5]; PrkA AAA domain [PF08298.13, score=22.9]; AAA domain [PF13173.8, score=20.9]; MoxR domain in the MoxR-vWA-beta-propeller ternary systems [PF20030.1, score=19.2]} {Human: ENSG00000196365, LONP1, lon peptidase 1, mitochondrial, [RH, Score=1087, Expect=0.0]} {Mouse: ENSMUSG00000041168, Lonp1, lon peptidase 1, mitochondrial, [RH, Score=1100, Expect=0.0]} {Dmel: FBgn0036892, Lon, Lon protease, [RH, Score=1037, Expect=0.0]} {Celegans: WBGene00016391, lonp-1, Lon protease homolog, mitochondrial, [RH, Score=890, Expect=0.0]} {Smed: dd_Smed_v6_3971_0_1, dd_Smed_v6_3971_0_1, [RH, Score=1079, Expect=0.0]} {RNA1509_14560, RNA1509_51563} {RNA1310_4395, RNA1509_51563} {RNA1509_51563, RNA815_653} |
Cumulative graph for MligTC455_52270
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.876 | 3.747 | 0.43094 | 1.00000 | |
| RegionR2 | -0.215 | 3.747 | 0.69349 | 1.00000 | |
| RegionR3 | 0.324 | 3.747 | 0.39536 | 0.92521 | |
| RegionR4 | 0.052 | 3.747 | 0.91527 | 1.00000 | |
| RegionR5 | 0.584 | 3.747 | 0.07965 | 0.26117 | |
| RegionR6 | -0.427 | 3.747 | 0.31886 | 0.90743 | |
| RegionR7 | -0.977 | 3.747 | 0.14221 | 0.70402 | |
| RegionR8 | -0.217 | 3.747 | 0.76476 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.287 | 3.747 | 0.87027 | 1.00000 | |
| RegenerationR2 | 0.184 | 3.747 | 0.69656 | 0.95507 | |
| RegenerationR3 | 0.318 | 3.747 | 0.48868 | 0.85377 | |
| RegenerationR4 | 0.954 | 3.747 | 0.04114 | 0.32647 | |
| RegenerationR5 | 0.667 | 3.747 | 0.09213 | 0.46533 | |
| RegenerationR6 | 1.58 | 3.747 | 0.00097 | 0.03374 | |
| RegenerationBL | 1.401 | 3.747 | 0.02494 | 0.17385 | |
| RegenerationTP | 1.23 | 3.747 | 0.06301 | 0.40643 |
Genes with expression patterns similar to MligTC455_52270
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_52270 | 496 | 10.34 | Mlig455_042014 | Neo: - Age: - |
LONP1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_042014 {REF} {Length: 4054} {TRANSSPLICED} {Pfam: Lon protease (S16) C-terminal proteolytic domain [PF05362.15, score=219.0]; ATP-dependent protease La (LON) substrate-binding domain [PF02190.18, score=96.2]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=85.0]; Subunit ChlI of Mg-chelatase [PF13541.8, score=40.2]; AAA domain (dynein-related subfamily) [PF07728.16, score=36.3]; AAA domain (Cdc48 subfamily) [PF07724.16, score=32.4]; AAA ATPase domain [PF13191.8, score=28.7]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=26.3]; AAA domain [PF13401.8, score=23.5]; PrkA AAA domain [PF08298.13, score=22.9]; AAA domain [PF13173.8, score=20.9]; MoxR domain in the MoxR-vWA-beta-propeller ternary systems [PF20030.1, score=19.2]} {Human: ENSG00000196365, LONP1, lon peptidase 1, mitochondrial, [RH, Score=1087, Expect=0.0]} {Mouse: ENSMUSG00000041168, Lonp1, lon peptidase 1, mitochondrial, [RH, Score=1100, Expect=0.0]} {Dmel: FBgn0036892, Lon, Lon protease, [RH, Score=1037, Expect=0.0]} {Celegans: WBGene00016391, lonp-1, Lon protease homolog, mitochondrial, [RH, Score=890, Expect=0.0]} {Smed: dd_Smed_v6_3971_0_1, dd_Smed_v6_3971_0_1, [RH, Score=1079, Expect=0.0]} {RNA1509_14560, RNA1509_51563} {RNA1310_4395, RNA1509_51563} {RNA1509_51563, RNA815_653} |
| 2. | MligTC455_50646 | 258 | 5.37 | Mlig455_069118 | Neo: - Age: - |
SCYL1 | 1.802 | - | - | - | 0.983 | 0.819 | - | Mlig455_069118 {REF} {Length: 3667} {TRANSSPLICED} {Pfam: HEAT repeat [PF02985.24, score=41.4]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=37.1]; HEAT repeats [PF13646.8, score=32.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=27.4]; Protein kinase domain [PF00069.27, score=25.0]} {Human: ENSG00000142186, SCYL1, SCY1 like pseudokinase 1, [RH, Score=446, Expect=1e-144]} {Mouse: ENSMUSG00000024941, Scyl1, SCY1-like 1 (S. cerevisiae), [RH, Score=445, Expect=3e-144]} {Dmel: FBgn0260990, yata, [RH, Score=518, Expect=6e-172]} {Celegans: WBGene00012337, W07G4.3, [RH, Score=409, Expect=9e-131]} {Smed: dd_Smed_v6_3470_0_1, dd_Smed_v6_3470_0_1, [RH, Score=461, Expect=2e-152]} {RNA1509_23084} {RNA1310_4140} {RNA815_4060} |
| 3. | MligTC455_53516 | 301 | 6.26 | Mlig455_042461 | Neo: - Age: - |
PHYHD1 | 0.967 | - | - | - | 0.967 | - | - | Mlig455_042461 {REF} {Length: 2483} {TRANSSPLICED} {Pfam: Phytanoyl-CoA dioxygenase (PhyH) [PF05721.15, score=108.4]} {Human: ENSG00000175287, PHYHD1, phytanoyl-CoA dioxygenase domain containing 1, [Score=72.4, Expect=4e-14]} {Mouse: ENSMUSG00000079484, Phyhd1, phytanoyl-CoA dioxygenase domain containing 1, [Score=67.0, Expect=2e-12]} {Celegans: WBGene00013650, Y105C5B.9, Phytanoyl-CoA dioxygenase domain-containing protein 1 homolog, [Score=59.3, Expect=5e-10]} {Smed: dd_Smed_v6_1292_0_1, dd_Smed_v6_1292_0_1, [RH, Score=285, Expect=4e-96]} {RNA1509_59515} {RNA1310_29715} {RNA815_13679} |
| 4. | MligTC455_18665 | 532 | 11.09 | Mlig455_003600 | Neo: - Age: - Region-enriched R5: 1.894/0.00192 |
PPP2R1B | 0.963 | - | - | - | 0.963 | - | - | Mlig455_003600 {REF} {Length: 4431} {TRANSSPLICED} {Pfam: HEAT repeats [PF13646.8, score=98.4]; HEAT repeat [PF02985.24, score=92.6]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=37.4]; HEAT-like repeat [PF13513.8, score=36.4]; Adaptin N terminal region [PF01602.22, score=35.4]; Vacuolar 14 Fab1-binding region [PF12755.9, score=32.6]; V-ATPase subunit H [PF03224.16, score=20.6]} {Human: ENSG00000137713, PPP2R1B, protein phosphatase 2 scaffold subunit Abeta, [Score=194, Expect=1e-53]; ENSG00000105568, PPP2R1A, protein phosphatase 2 scaffold subunit Aalpha, [Score=194, Expect=9e-54]} {Mouse: ENSMUSG00000032058, Ppp2r1b, protein phosphatase 2, regulatory subunit A, beta, [Score=195, Expect=3e-54]; ENSMUSG00000007564, Ppp2r1a, protein phosphatase 2, regulatory subunit A, alpha, [Score=194, Expect=8e-54]} {Dmel: FBgn0260439, Pp2A-29B, Protein phosphatase 2A at 29B, [Score=142, Expect=6e-36]} {Celegans: WBGene00003901, paa-1, Probable serine/threonine-protein phosphatase PP2A regulatory subunit, [Score=172, Expect=3e-46]} {Smed: dd_Smed_v6_3840_0_1, dd_Smed_v6_3840_0_1, [RH, Score=361, Expect=5e-117]} {RNA1509_6573} {RNA1310_2047.1} {RNA815_3133} |
| 5. | MligTC455_45133 | 1102 | 22.97 | Mlig455_029424 | Neo: - Age: Up-Down-Down |
LAMC1 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_029424 {REF} {Length: 4934} {Pfam: Laminin EGF domain [PF00053.26, score=234.3]; Laminin B (Domain IV) [PF00052.20, score=43.2]} {Human: ENSG00000135862, LAMC1, laminin subunit gamma 1, [Score=687, Expect=0.0]; ENSG00000050555, LAMC3, laminin subunit gamma 3, [Score=654, Expect=0.0]} {Mouse: ENSMUSG00000026478, Lamc1, laminin, gamma 1, [Score=681, Expect=0.0]; ENSMUSG00000026840, Lamc3, laminin gamma 3, [Score=647, Expect=0.0]} {Dmel: FBgn0267348, LanB2, Laminin B2, [Score=704, Expect=0.0]} {Celegans: WBGene00016913, lam-2, Laminin-like protein lam-2, [Score=644, Expect=0.0]} {Smed: dd_Smed_v6_7359_0_1, dd_Smed_v6_7359_0_1, [Score=608, Expect=0.0]} {RNA1509_19604} {RNA1310_816} {RNA815_1605} |
| 6. | MligTC455_50459 | 483 | 10.05 | Mlig455_023585, Mlig455_067004 | Neo: Neoblast, stringent Age: - Region-enriched R4: 2.547/0.00928 |
0.957 | - | - | - | 0.957 | - | - | Mlig455_023585 {REF} {Length: 2596} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=38.4]} {RNA1509_32778} {RNA1310_38674} {RNA815_25642} Mlig455_067004 {REF} {Length: 2455} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=38.4]} {RNA1509_32778} {RNA1310_38674, RNA1509_32778} {RNA1509_32778, RNA815_25642} |
|
| 7. | MligTC455_12534 | 1611 | 33.55 | Mlig455_046860 | Neo: Int S/G2/M Age: - |
NOP53 | 0.953 | - | - | - | 0.953 | - | - | Mlig455_046860 {REF} {Length: 1829} {TRANSSPLICED} {Pfam: Nop53 (60S ribosomal biogenesis) [PF07767.13, score=161.6]} {Human: ENSG00000105373, NOP53, NOP53 ribosome biogenesis factor, [RH, Score=121, Expect=2e-29]} {Mouse: ENSMUSG00000041560, Nop53, NOP53 ribosome biogenesis factor, [RH, Score=117, Expect=2e-28]} {Dmel: FBgn0030061, CG1785, [RH, Score=82.4, Expect=1e-16]} {Celegans: WBGene00012692, Y39B6A.33, [RH, Score=53.9, Expect=1e-07]} {RNA1509_22656, RNA1509_4085} {RNA1310_16335, RNA1509_22656, RNA1509_4085} {RNA1509_22656, RNA1509_4085, RNA815_6216} |
| 8. | MligTC455_16926 | 1129 | 23.52 | Mlig455_046223 | Neo: - Age: - |
DARS | 0.953 | - | - | - | 0.953 | - | - | Mlig455_046223 {REF} {Length: 3094} {TRANSSPLICED} {Pfam: tRNA synthetases class II (D, K and N) [PF00152.22, score=256.9]; OB-fold nucleic acid binding domain [PF01336.27, score=30.9]; tRNA synthetases class II core domain (F) [PF01409.22, score=20.0]} {Human: ENSG00000115866, DARS, aspartyl-tRNA synthetase, [RH, Score=637, Expect=0.0]} {Mouse: ENSMUSG00000026356, Dars, aspartyl-tRNA synthetase, [RH, Score=642, Expect=0.0]} {Dmel: FBgn0002069, AspRS, Aspartyl-tRNA synthetase, [RH, Score=647, Expect=0.0]} {Celegans: WBGene00001094, dars-1, Aspartate--tRNA ligase, cytoplasmic, [RH, Score=635, Expect=0.0]} {Smed: dd_Smed_v6_2962_0_1, dd_Smed_v6_2962_0_1, [RH, Score=531, Expect=0.0]} {RNA1509_11128, RNA1509_23524, RNA1509_37471, RNA1509_40985, RNA1509_42643, RNA1509_59772} {RNA1310_9865, RNA1509_11128, RNA1509_23524, RNA1509_37471, RNA1509_40985, RNA1509_42643, RNA1509_59772} {RNA1509_11128, RNA1509_23524, RNA1509_37471, RNA1509_40985, RNA1509_42643, RNA1509_59772, RNA815_3815} |
| 9. | MligTC455_24404 | 353 | 7.36 | Mlig455_063357 | Neo: Irradiation Age: - |
ATAD2 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_063357 {REF} {Length: 5118} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=147.6]; Bromodomain [PF00439.27, score=48.1]; AAA+ lid domain [PF17862.3, score=36.4]; AAA domain (Cdc48 subfamily) [PF07724.16, score=23.0]; AAA ATPase domain [PF13191.8, score=22.0]} {Human: ENSG00000156802, ATAD2, ATPase family, AAA domain containing 2, [Score=615, Expect=0.0]} {Mouse: ENSMUSG00000116053, Atad2, ATPase family, AAA domain containing 2, [Score=605, Expect=0.0]; ENSMUSG00000022360, Atad2, ATPase family, AAA domain containing 2, [Score=605, Expect=0.0]} {Dmel: FBgn0261014, TER94, [Score=220, Expect=2e-59]} {Celegans: WBGene00008682, lex-1, Tat-binding homolog 7, [Score=493, Expect=9e-153]} {Smed: dd_Smed_v6_8534_0_1, dd_Smed_v6_8534_0_1, [RH, Score=513, Expect=1e-161]} {RNA1509_47976} {RNA1310_2482.1, RNA1509_47976} {RNA1509_47976, RNA815_17171} |
| 10. | MligTC455_37612 | 366 | 7.62 | Mlig455_026659 | Neo: Int S/G2/M Age: - Region-enriched R5: 3.326/0.00001 |
0.952 | - | - | - | 0.952 | - | - | Mlig455_026659 {REF} {Length: 1882} {TRANSSPLICED} {RNA1509_32576, RNA1509_34929} {RNA1310_30559.1, RNA1509_32576, RNA1509_34929} {RNA1509_32576, RNA1509_34929, RNA815_13235.1} | |
| 11. | MligTC455_22079 | 400 | 8.33 | Mlig455_031528 | Neo: - Age: - |
ROCK2 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_031528 {REF} {Length: 5932} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=167.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=85.0]; Kinase-like [PF14531.8, score=43.9]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=28.0]; PH domain [PF00169.31, score=21.1]; Rho Binding [PF08912.13, score=21.0]; ABC1 atypical kinase-like domain [PF03109.18, score=19.7]} {Human: ENSG00000134318, ROCK2, Rho associated coiled-coil containing protein kinase 2, [RH, Score=486, Expect=6e-150]} {Mouse: ENSMUSG00000020580, Rock2, Rho-associated coiled-coil containing protein kinase 2, [RH, Score=491, Expect=2e-151]} {Dmel: FBgn0026181, Rok, Rho kinase, [Score=304, Expect=2e-85]} {Celegans: WBGene00002694, let-502, Rho-associated protein kinase let-502, [Score=343, Expect=8e-100]} {Smed: dd_Smed_v6_2914_0_1, dd_Smed_v6_2914_0_1, [RH, Score=327, Expect=4e-94]} {RNA1509_27338, RNA1509_6249} {RNA1310_2176.1, RNA1509_27338} {RNA1509_27338, RNA815_633} |
| 12. | MligTC455_32845 | 1108 | 23.08 | Mlig455_045530 | Neo: - Age: logFC(26M/2M)=0.181 |
XPNPEP1 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_045530 {REF} {Length: 2956} {TRANSSPLICED} {Pfam: Metallopeptidase family M24 [PF00557.26, score=141.0]; Creatinase/Prolidase N-terminal domain [PF16189.7, score=105.5]; Creatinase/Prolidase N-terminal domain [PF01321.20, score=85.5]; C-terminal region of peptidase_M24 [PF16188.7, score=79.8]} {Human: ENSG00000108039, XPNPEP1, X-prolyl aminopeptidase 1, [RH, Score=540, Expect=0.0]} {Mouse: ENSMUSG00000025027, Xpnpep1, X-prolyl aminopeptidase (aminopeptidase P) 1, soluble, [RH, Score=534, Expect=0.0]} {Dmel: FBgn0026150, ApepP, Aminopeptidase P, [RH, Score=457, Expect=2e-154]} {Celegans: WBGene00000155, app-1, Xaa-Pro aminopeptidase app-1, [RH, Score=439, Expect=4e-147]} {Smed: dd_Smed_v6_4029_0_1, dd_Smed_v6_4029_0_1, [RH, Score=493, Expect=2e-168]} {RNA1509_11288, RNA1509_17092, RNA1509_20213, RNA1509_28257, RNA1509_49860, RNA1509_50061} {RNA1310_14022.2, RNA1509_11288, RNA1509_17092, RNA1509_20213, RNA1509_28257, RNA1509_49860, RNA1509_50061} {RNA1509_11288, RNA1509_17092, RNA1509_20213, RNA1509_28257, RNA1509_49860, RNA1509_50061, RNA815_8183.1} |
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