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Results for MligTC455_39404

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_39404 172 3.59 Mlig455_039240, Mlig455_053901

Neo: -

Age: Down-Up-Down

 ASIC1

Mlig455_039240 {REF} {Length: 2885} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=208.9]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=61.2, Expect=4e-09]} {Mouse: ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=58.5, Expect=2e-08]} {Celegans: WBGene00003168, mec-4, Degenerin mec-4, [Score=64.3, Expect=2e-10]} {Smed: dd_Smed_v6_12878_0_1, dd_Smed_v6_12878_0_1, [Score=116, Expect=5e-27]} {RNA1509_33503} {RNA1310_10134} {RNA815_5943}

Mlig455_053901 {REF} {Length: 3001} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=208.9]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=61.2, Expect=4e-09]} {Mouse: ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=58.5, Expect=2e-08]} {Celegans: WBGene00003168, mec-4, Degenerin mec-4, [Score=64.3, Expect=2e-10]} {Smed: dd_Smed_v6_12878_0_1, dd_Smed_v6_12878_0_1, [Score=116, Expect=5e-27]} {RNA1509_33503} {RNA1310_10134, RNA1509_33503} {RNA1509_33503, RNA815_5943}

Cumulative graph for MligTC455_39404

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.55 2.55 0.36503 1.00000
RegionR2 0.504 2.55 0.62607 0.96827
RegionR3 -0.358 2.55 0.93865 1.00000
RegionR4 0.05 2.55 0.83254 1.00000
RegionR5 -0.731 2.55 0.97531 1.00000
RegionR6 0.539 2.55 0.56595 1.00000
RegionR7 2.353 2.55 0.00841 0.15425
RegionR8 2.193 2.55 0.05757 0.46927

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.139 2.55 0.99993 1.00000
RegenerationR2 -0.712 2.55 0.22669 0.67444
RegenerationR3 0.152 2.55 0.83171 0.99139
RegenerationR4 -0.432 2.55 0.50445 0.87141
RegenerationR5 0.784 2.55 0.18350 0.61371
RegenerationR6 -0.034 2.55 0.94476 1.00000
RegenerationBL -3.871 2.55 0.00067 0.01750
RegenerationTP -1.659 2.55 0.04745 0.35837


Genes with expression patterns similar to MligTC455_39404

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_39404 172 3.59 Mlig455_039240, Mlig455_053901

Neo: -

Age: Down-Up-Down

 ASIC1 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_039240 {REF} {Length: 2885} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=208.9]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=61.2, Expect=4e-09]} {Mouse: ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=58.5, Expect=2e-08]} {Celegans: WBGene00003168, mec-4, Degenerin mec-4, [Score=64.3, Expect=2e-10]} {Smed: dd_Smed_v6_12878_0_1, dd_Smed_v6_12878_0_1, [Score=116, Expect=5e-27]} {RNA1509_33503} {RNA1310_10134} {RNA815_5943}

Mlig455_053901 {REF} {Length: 3001} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=208.9]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=61.2, Expect=4e-09]} {Mouse: ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=58.5, Expect=2e-08]} {Celegans: WBGene00003168, mec-4, Degenerin mec-4, [Score=64.3, Expect=2e-10]} {Smed: dd_Smed_v6_12878_0_1, dd_Smed_v6_12878_0_1, [Score=116, Expect=5e-27]} {RNA1509_33503} {RNA1310_10134, RNA1509_33503} {RNA1509_33503, RNA815_5943}
2. MligTC455_22386 344 7.17 Mlig455_010779

Neo: -

Age: -

 1.769 - - - 0.972 - 0.797 Mlig455_010779 {REF} {Length: 3500} {Pfam: Leucine Rich repeat [PF13516.8, score=32.8]} {Mouse: ENSMUSG00000025226, Fbxl15, F-box and leucine-rich repeat protein 15, [Score=48.5, Expect=1e-05]} {RNA1509_55784} {RNA1310_6660.1} {RNA815_11523}
3. MligTC455_43105 56 1.16 Mlig455_007239

Neo: -

Age: -

 SLC39A9 1.697 - - - - 0.739 0.958 Mlig455_007239 {REF} {Length: 4657} {Pfam: ZIP Zinc transporter [PF02535.24, score=112.3]} {Human: ENSG00000029364, SLC39A9, solute carrier family 39 member 9, [Score=278, Expect=1e-91]} {Mouse: ENSMUSG00000048833, Slc39a9, solute carrier family 39 (zinc transporter), member 9, [Score=255, Expect=8e-83]} {Dmel: FBgn0039902, Zip102B, Zinc/iron regulated transporter-related protein 102B, [Score=216, Expect=9e-68]} {Celegans: WBGene00011329, zipt-9, Zrt (ZRT), Irt-(IRT-) like Protein Transporter, [RH, Score=240, Expect=3e-76]} {Smed: dd_Smed_v6_6946_0_1, dd_Smed_v6_6946_0_1, [RH, Score=293, Expect=2e-97]} {RNA1509_18192} {RNA1310_37072} {RNA815_20206}
4. MligTC455_19326 52 1.07 Mlig455_070710

Neo: -

Age: -

Region-enriched R4: 4.193/0.03854
Region-enriched R5: 3.125/0.04039

 1.687 - - - 0.950 - 0.737 Mlig455_070710 {REF} {Length: 339} {NoTransDecoderORF} {RNA1310_148471} {RNA815_5995}
5. MligTC455_52538 135 2.82 Mlig455_047397

Neo: -

Age: -

 KCNIP3 0.978 - - - - - 0.978 Mlig455_047397 {REF} {Length: 1022} {Pfam: EF-hand domain pair [PF13499.8, score=43.4]; EF hand [PF00036.34, score=41.6]; EF-hand domain [PF13405.8, score=37.6]; EF-hand domain pair [PF13833.8, score=27.5]; EF hand [PF13202.8, score=20.3]} {Human: ENSG00000115041, KCNIP3, potassium voltage-gated channel interacting protein 3, [Score=152, Expect=1e-44]; ENSG00000185774, KCNIP4, potassium voltage-gated channel interacting protein 4, [Score=150, Expect=5e-44]; ENSG00000120049, KCNIP2, potassium voltage-gated channel interacting protein 2, [Score=148, Expect=2e-43]; ENSG00000182132, KCNIP1, potassium voltage-gated channel interacting protein 1, [Score=145, Expect=3e-42]} {Mouse: ENSMUSG00000079056, Kcnip3, Kv channel interacting protein 3, calsenilin, [Score=153, Expect=1e-44]; ENSMUSG00000029088, Kcnip4, Kv channel interacting protein 4, [Score=150, Expect=3e-44]; ENSMUSG00000025221, Kcnip2, Kv channel-interacting protein 2, [Score=149, Expect=2e-43]; ENSMUSG00000053519, Kcnip1, Kv channel-interacting protein 1, [Score=146, Expect=7e-43]} {Dmel: FBgn0265595, CG44422, [Score=160, Expect=2e-46]} {Celegans: WBGene00003563, ncs-1, Neuronal calcium sensor 1, [Score=132, Expect=3e-38]} {Smed: dd_Smed_v6_9434_0_1, dd_Smed_v6_9434_0_1, [Score=142, Expect=9e-42]} {RNA1509_26771} {RNA1310_17572} {RNA815_13854}
6. MligTC455_25711 42 0.88 Mlig455_017209

Neo: -

Age: -

Region-enriched R4: 3.017/0.03281

 0.975 - - 0.975 - - - Mlig455_017209 {REF} {Length: 1087} {NoTransDecoderORF} {RNA1509_13774} {RNA1310_117038} {RNA815_381.2}
7. MligTC455_49738 135 2.81 Mlig455_038770

Neo: -

Age: -

 0.968 - - - - - 0.968 Mlig455_038770 {REF} {Length: 641} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_27803} {RNA1310_53700, RNA1509_27803} {RNA1509_27803, RNA815_27923}
8. MligTC455_27519 136 2.83 Mlig455_006410

Neo: -

Age: Down-Down-Up

 CRB2 0.964 - - 0.964 - - - Mlig455_006410 {REF} {Length: 4122} {Pfam: EGF-like domain [PF00008.29, score=130.3]; Human growth factor-like EGF [PF12661.9, score=68.3]; Laminin G domain [PF02210.26, score=25.2]} {Human: ENSG00000148204, CRB2, crumbs 2, cell polarity complex component, [Score=326, Expect=6e-93]} {Mouse: ENSMUSG00000035403, Crb2, crumbs family member 2, [Score=323, Expect=4e-92]} {Dmel: FBgn0259685, crb, crumbs, [Score=377, Expect=7e-109]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=212, Expect=2e-55]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=186, Expect=1e-47]} {RNA1509_50019} {RNA1310_5116.1} {RNA815_693.1}
9. MligTC455_16940 139 2.9 Mlig455_040450

Neo: -

Age: -

 0.962 - - - - - 0.962 Mlig455_040450 {REF} {Length: 923} {Pfam: Methyltransferase domain [PF13383.8, score=26.8]} {Smed: dd_Smed_v6_3811_0_2, dd_Smed_v6_3811_0_2, [Score=142, Expect=2e-42]} {RNA1509_5940} {RNA1310_10053.1} {RNA815_19723}
10. MligTC455_18906 294 6.12 Mlig455_063115

Neo: Irradiation

Age: -

Regeneration-upregulated R6: 3.274

Regeneration-enriched R6: 3.274

 0.962 - - - 0.962 - - Mlig455_063115 {REF} {Length: 1769} {Pfam: BTB/POZ domain [PF00651.33, score=38.8]; Monogalactosyldiacylglycerol (MGDG) synthase [PF06925.13, score=18.7]} {RNA1509_17649} {RNA1310_15518, RNA1509_17649} {RNA1509_17649, RNA815_7807}
11. MligTC455_54149 367 7.64 Mlig455_002524

Neo: -

Age: -

 0.962 - - 0.962 - - - Mlig455_002524 {REF} {Length: 1803} {TRANSSPLICED} {RNA1310_34799.1} {RNA815_13806}
12. MligTC455_45849 592 12.34 Mlig455_061348

Neo: Int S/G2/M

Age: -

Region-enriched R4: 2.287/0.00077
Region-enriched R5: 1.885/0.00448

 0.96 - - - 0.960 - - Mlig455_061348 {REF} {Length: 1305} {TRANSSPLICED} {RNA1509_45847, RNA1509_55659, RNA1509_55946} {RNA1310_26076, RNA1509_45847, RNA1509_55659, RNA1509_55946} {RNA1509_45847, RNA1509_55659, RNA1509_55946, RNA815_27506}
13. MligTC455_49224 228 4.75 Mlig455_020671, Mlig455_048768

Neo: -

Age: -

 VPS41 0.96 - - - - - 0.960

Mlig455_020671 {REF} {Length: 3300} {TRANSSPLICED} {Pfam: Region in Clathrin and VPS [PF00637.22, score=59.8]; zinc-RING finger domain [PF14634.8, score=22.0]} {Human: ENSG00000006715, VPS41, VPS41, HOPS complex subunit, [RH, Score=464, Expect=5e-150]} {Mouse: ENSMUSG00000041236, Vps41, VPS41 HOPS complex subunit, [RH, Score=459, Expect=3e-148]} {Dmel: FBgn0002566, lt, light, [RH, Score=401, Expect=2e-126]} {Celegans: WBGene00017974, vps-41, Vacuolar protein sorting-associated protein 41 homolog, [RH, Score=303, Expect=2e-89]} {Smed: dd_Smed_v6_3481_0_1, dd_Smed_v6_3481_0_1, [RH, Score=390, Expect=7e-122]} {RNA1509_34132} {RNA1310_6719} {RNA815_4867}

Mlig455_048768 {REF} {Length: 3692} {Pfam: Region in Clathrin and VPS [PF00637.22, score=59.8]; zinc-RING finger domain [PF14634.8, score=22.0]} {Human: ENSG00000006715, VPS41, VPS41, HOPS complex subunit, [RH, Score=464, Expect=5e-150]} {Mouse: ENSMUSG00000041236, Vps41, VPS41 HOPS complex subunit, [RH, Score=459, Expect=4e-148]} {Dmel: FBgn0002566, lt, light, [RH, Score=401, Expect=2e-126]} {Celegans: WBGene00017974, vps-41, Vacuolar protein sorting-associated protein 41 homolog, [RH, Score=302, Expect=5e-89]} {Smed: dd_Smed_v6_3481_0_1, dd_Smed_v6_3481_0_1, [RH, Score=389, Expect=2e-121]} {RNA1509_34132} {RNA1310_6719, RNA1509_34132} {RNA1509_34132, RNA815_4867}
14. MligTC455_13444 381 7.94 Mlig455_068853

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=1.519

 0.955 - - - - - 0.955 Mlig455_068853 {REF} {Length: 1499} {RNA1509_59159} {RNA1310_70014.1} {RNA815_29540}
15. MligTC455_25124 192 4 Mlig455_028759

Neo: Irradiation

Age: -

 TRIM2 0.953 - - - 0.953 - - Mlig455_028759 {REF} {Length: 5021} {Pfam: NHL repeat [PF01436.23, score=39.3]; RING-type zinc-finger [PF13445.8, score=18.7]} {Human: ENSG00000109654, TRIM2, tripartite motif containing 2, [Score=57.0, Expect=1e-07]} {Mouse: ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=58.2, Expect=4e-08]} {Dmel: FBgn0265356, tn, thin, [Score=52.0, Expect=2e-06]} {Celegans: WBGene00003559, ncl-1, B-box type zinc finger protein ncl-1, [Score=85.9, Expect=5e-17]} {RNA1509_23913} {RNA1310_10840} {RNA815_6531}
16. MligTC455_47579 133 2.76 Mlig455_041880

Neo: -

Age: Down-Up-Down

 0.952 - - - - - 0.952 Mlig455_041880 {REF} {Length: 2196} {TRANSSPLICED} {RNA1509_11215, RNA1509_36784} {RNA1310_37626, RNA1509_11215} {RNA1509_11215, RNA815_15592}

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