M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_17276

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_17276 191 3.98 Mlig455_014333

Neo: -

Age: -

Region-enriched R5: 2.646/0.02196

 PTPRS Mlig455_014333 {REF} {Length: 2903} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=351.6]} {Human: ENSG00000105426, PTPRS, protein tyrosine phosphatase, receptor type S, [Score=291, Expect=2e-83]; ENSG00000173482, PTPRM, protein tyrosine phosphatase, receptor type M, [Score=280, Expect=9e-80]; ENSG00000142949, PTPRF, protein tyrosine phosphatase, receptor type F, [Score=278, Expect=1e-78]; ENSG00000273993, PTPRK, protein tyrosine phosphatase, receptor type K, [Score=277, Expect=9e-79]; ENSG00000152894, PTPRK, protein tyrosine phosphatase, receptor type K, [Score=277, Expect=9e-79]} {Mouse: ENSMUSG00000013236, Ptprs, protein tyrosine phosphatase, receptor type, S, [Score=285, Expect=2e-81]; ENSMUSG00000028399, Ptprd, protein tyrosine phosphatase, receptor type, D, [Score=281, Expect=5e-80]; ENSMUSG00000033278, Ptprm, protein tyrosine phosphatase, receptor type, M, [Score=281, Expect=4e-80]; ENSMUSG00000033295, Ptprf, protein tyrosine phosphatase, receptor type, F, [Score=277, Expect=7e-79]; ENSMUSG00000053141, Ptprt, protein tyrosine phosphatase, receptor type, T, [Score=272, Expect=3e-77]; ENSMUSG00000019889, Ptprk, protein tyrosine phosphatase, receptor type, K, [Score=271, Expect=7e-77]} {Dmel: FBgn0267486, Ptp36E, Protein tyrosine phosphatase 36E, [Score=329, Expect=4e-102]} {Celegans: WBGene00011755, T13H5.1, Protein-tyrosine-phosphatase, [RH, Score=299, Expect=9e-91]} {Smed: dd_Smed_v6_13723_0_1, dd_Smed_v6_13723_0_1, [RH, Score=276, Expect=6e-82]} {RNA1509_14248} {RNA1310_6957.1} {RNA815_16025}

Cumulative graph for MligTC455_17276

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.678 2.686 0.99971 1.00000
RegionR2 1.785 2.686 0.17617 0.52464
RegionR3 1.483 2.686 0.18963 0.72579
RegionR4 0.179 2.686 0.70672 0.99354
RegionR5 2.646 2.686 0.00272 0.02196
RegionR6 0.203 2.686 0.69745 1.00000
RegionR7 1.469 2.686 0.27603 0.90690
RegionR8 -4.088 2.686 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.303 2.686 0.99992 1.00000
RegenerationR2 0.106 2.686 0.88531 1.00000
RegenerationR3 -0.328 2.686 0.67503 0.93869
RegenerationR4 0.469 2.686 0.58570 0.90728
RegenerationR5 -0.696 2.686 0.31878 0.74257
RegenerationR6 -0.523 2.686 0.58517 0.86100
RegenerationBL 3.635 2.686 0.00410 0.05763
RegenerationTP 0.677 2.686 0.67690 1.00000


Genes with expression patterns similar to MligTC455_17276

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_17276 191 3.98 Mlig455_014333

Neo: -

Age: -

Region-enriched R5: 2.646/0.02196

 PTPRS 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_014333 {REF} {Length: 2903} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=351.6]} {Human: ENSG00000105426, PTPRS, protein tyrosine phosphatase, receptor type S, [Score=291, Expect=2e-83]; ENSG00000173482, PTPRM, protein tyrosine phosphatase, receptor type M, [Score=280, Expect=9e-80]; ENSG00000142949, PTPRF, protein tyrosine phosphatase, receptor type F, [Score=278, Expect=1e-78]; ENSG00000273993, PTPRK, protein tyrosine phosphatase, receptor type K, [Score=277, Expect=9e-79]; ENSG00000152894, PTPRK, protein tyrosine phosphatase, receptor type K, [Score=277, Expect=9e-79]} {Mouse: ENSMUSG00000013236, Ptprs, protein tyrosine phosphatase, receptor type, S, [Score=285, Expect=2e-81]; ENSMUSG00000028399, Ptprd, protein tyrosine phosphatase, receptor type, D, [Score=281, Expect=5e-80]; ENSMUSG00000033278, Ptprm, protein tyrosine phosphatase, receptor type, M, [Score=281, Expect=4e-80]; ENSMUSG00000033295, Ptprf, protein tyrosine phosphatase, receptor type, F, [Score=277, Expect=7e-79]; ENSMUSG00000053141, Ptprt, protein tyrosine phosphatase, receptor type, T, [Score=272, Expect=3e-77]; ENSMUSG00000019889, Ptprk, protein tyrosine phosphatase, receptor type, K, [Score=271, Expect=7e-77]} {Dmel: FBgn0267486, Ptp36E, Protein tyrosine phosphatase 36E, [Score=329, Expect=4e-102]} {Celegans: WBGene00011755, T13H5.1, Protein-tyrosine-phosphatase, [RH, Score=299, Expect=9e-91]} {Smed: dd_Smed_v6_13723_0_1, dd_Smed_v6_13723_0_1, [RH, Score=276, Expect=6e-82]} {RNA1509_14248} {RNA1310_6957.1} {RNA815_16025}
2. MligTC455_28144 413 8.6 Mlig455_004583, Mlig455_014444, Mlig455_017702, Mlig455_031687, Mlig455_040527

Neo: -

Age: -

 2.407 - - 0.702 0.964 - 0.741

Mlig455_004583 {REF} {Length: 1809} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1}

Mlig455_014444 {REF} {Length: 2800} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1}

Mlig455_017702 {REF} {Length: 1835} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1}

Mlig455_031687 {REF} {Length: 2190} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1}

Mlig455_040527 {REF} {Length: 2301} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1}
3. MligTC455_52921 903 18.8 Mlig455_039568, Mlig455_051378

Neo: -

Age: -

 MLH3 1.83 - - - 0.867 - 0.963

Mlig455_039568 {REF} {Length: 890} {TRANSSPLICED} {Human: ENSG00000119684, MLH3, mutL homolog 3, [RH, Score=50.4, Expect=3e-07]} {Mouse: ENSMUSG00000021245, Mlh3, mutL homolog 3, [Score=47.8, Expect=2e-06]} {Smed: dd_Smed_v6_25712_0_1, dd_Smed_v6_25712_0_1, [RH, Score=58.2, Expect=4e-11]} {RNA1509_20519} {RNA1310_40805, RNA1509_20519} {RNA1509_20519, RNA815_19876}

Mlig455_051378 {REF} {Length: 879} {TRANSSPLICED} {Human: ENSG00000119684, MLH3, mutL homolog 3, [RH, Score=50.8, Expect=3e-07]} {Mouse: ENSMUSG00000021245, Mlh3, mutL homolog 3, [Score=47.8, Expect=3e-06]} {Smed: dd_Smed_v6_25712_0_1, dd_Smed_v6_25712_0_1, [RH, Score=58.2, Expect=7e-11]} {RNA1509_20519} {RNA1310_40805} {RNA815_19876}
4. MligTC455_22792 813 16.94 Mlig455_006911

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=0.573

 PPP1R10 1.801 - - - - 0.851 0.950 Mlig455_006911 {REF} {Length: 4431} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=34.5} {Pfam: TFIIS helical bundle-like domain [PF08711.13, score=20.9]; Negative regulator of genetic competence (MecA) [PF05389.14, score=18.7]} {Human: ENSG00000204569, PPP1R10, protein phosphatase 1 regulatory subunit 10, [RH, Score=98.6, Expect=2e-20]; ENSG00000230995, PPP1R10, protein phosphatase 1 regulatory subunit 10, [RH, Score=98.6, Expect=2e-20]; ENSG00000238104, PPP1R10, protein phosphatase 1 regulatory subunit 10, [RH, Score=98.6, Expect=2e-20]; ENSG00000235291, PPP1R10, protein phosphatase 1 regulatory subunit 10, [RH, Score=98.6, Expect=2e-20]; ENSG00000206489, PPP1R10, protein phosphatase 1 regulatory subunit 10, [RH, Score=98.6, Expect=2e-20]; ENSG00000227804, PPP1R10, protein phosphatase 1 regulatory subunit 10, [RH, Score=98.6, Expect=2e-20]; ENSG00000231737, PPP1R10, protein phosphatase 1 regulatory subunit 10, [RH, Score=98.6, Expect=2e-20]} {Mouse: ENSMUSG00000039220, Ppp1r10, protein phosphatase 1, regulatory subunit 10, [RH, Score=95.1, Expect=2e-19]} {Dmel: FBgn0053526, PNUTS, [RH, Score=87.4, Expect=4e-17]} {Smed: dd_Smed_v6_3726_0_1, dd_Smed_v6_3726_0_1, [Score=93.2, Expect=2e-19]} {RNA1509_35861, RNA1509_3759, RNA1509_41300} {RNA1310_6625, RNA1509_35861, RNA1509_41300} {RNA1509_35861, RNA1509_41300, RNA815_5489}
5. MligTC455_40991 373 7.77 Mlig455_012838

Neo: -

Age: Up-Down-Up

 RP1 1.797 - - - 0.836 0.961 - Mlig455_012838 {REF} {Length: 9664} {TRANSSPLICED} {Pfam: PLAT/LH2 domain [PF01477.25, score=188.4]; Doublecortin [PF03607.19, score=102.1]} {Human: ENSG00000104237, RP1, RP1, axonemal microtubule associated, [Score=419, Expect=3e-120]} {Mouse: ENSMUSG00000025900, Rp1, retinitis pigmentosa 1 (human), [Score=414, Expect=7e-119]} {Dmel: FBgn0261387, CG17528, [Score=68.9, Expect=6e-11]} {Celegans: WBGene00006993, zyg-8, Serine/threonine-protein kinase zyg-8, [Score=75.1, Expect=5e-13]} {Smed: dd_Smed_v6_10315_0_2, dd_Smed_v6_10315_0_2, [Score=480, Expect=2e-142]} {RNA1509_42150} {RNA1310_1407} {RNA815_6255}
6. MligTC455_40204 348 7.24 Mlig455_064913, Mlig455_066843

Neo: -

Age: logFC(26M/2M)=-0.350

 1.771 - - - 0.959 0.812 -

Mlig455_064913 {REF} {Length: 1143} {NoTransDecoderORF} {RNA1509_52747} {RNA1310_89294} {RNA815_41786}

Mlig455_066843 {REF} {Length: 633} {NoTransDecoderORF} {RNA1310_106751} {RNA815_41786}
7. MligTC455_48029 995 20.73 Mlig455_031836

Neo: -

Age: Down-Down-Up

Region-enriched R5: 2.093/0.00069

Regeneration-upregulated BL: 2.388

Regeneration-enriched BL: 2.388

 SPSB4 1.728 - 0.749 - - - 0.979 Mlig455_031836 {REF} {Length: 1363} {TRANSSPLICED} {Pfam: SPRY domain [PF00622.30, score=65.7]; SOCS box [PF07525.18, score=33.4]} {Human: ENSG00000175093, SPSB4, splA/ryanodine receptor domain and SOCS box containing 4, [Score=316, Expect=3e-107]; ENSG00000171621, SPSB1, splA/ryanodine receptor domain and SOCS box containing 1, [Score=315, Expect=5e-107]} {Mouse: ENSMUSG00000039911, Spsb1, splA/ryanodine receptor domain and SOCS box containing 1, [Score=316, Expect=2e-107]; ENSMUSG00000046997, Spsb4, splA/ryanodine receptor domain and SOCS box containing 4, [Score=311, Expect=1e-105]} {Dmel: FBgn0026238, gus, gustavus, [Score=306, Expect=1e-103]} {Celegans: WBGene00021597, spsb-1, SPSB (SPry and Socs Box) family, [RH, Score=262, Expect=1e-84]} {Smed: dd_Smed_v6_9905_0_1, dd_Smed_v6_9905_0_1, [Score=213, Expect=1e-66]} {RNA1509_16638} {RNA1310_11847} {RNA815_5105}
8. MligTC455_32055 618 12.88 Mlig455_040050

Neo: -

Age: -

Region-enriched R5: 1.705/0.04238

 1.709 0.753 - - - - 0.956 Mlig455_040050 {REF} {Length: 6034} {RNA1509_30489} {RNA1310_22669} {RNA815_17677}
9. MligTC455_49541 255 5.31 Mlig455_052626

Neo: -

Age: Down-Down-Up

 KLHL12 1.708 - - - 0.754 - 0.954 Mlig455_052626 {REF} {Length: 3902} {TRANSSPLICED} {Pfam: Kelch motif [PF01344.27, score=209.7]; Kelch motif [PF13964.8, score=137.5]; BTB/POZ domain [PF00651.33, score=108.3]; BTB And C-terminal Kelch [PF07707.17, score=101.5]; Galactose oxidase, central domain [PF13418.8, score=74.8]; Kelch motif [PF07646.17, score=69.4]; Galactose oxidase, central domain [PF13415.8, score=67.1]; Kelch motif [PF13854.8, score=36.4]} {Human: ENSG00000117153, KLHL12, kelch like family member 12, [RH, Score=607, Expect=0.0]} {Mouse: ENSMUSG00000026455, Klhl12, kelch-like 12, [RH, Score=607, Expect=0.0]} {Dmel: FBgn0040230, dbo, diablo, [Score=373, Expect=2e-121]} {Celegans: WBGene00020030, R12E2.1, [Score=352, Expect=1e-113]} {Smed: dd_Smed_v6_7304_0_1, dd_Smed_v6_7304_0_1, [RH, Score=613, Expect=0.0]} {RNA1509_17800} {RNA1310_5820, RNA1509_17800} {RNA1509_17800, RNA815_4439}
10. MligTC455_38322 256 5.34 Mlig455_056978

Neo: Int S/G2/M

Age: -

Region-enriched R5: 2.286/0.01138

 1.706 - - - - 0.753 0.953 Mlig455_056978 {REF} {Length: 1123} {TRANSSPLICED} {RNA1509_54870} {RNA1310_32129, RNA1509_54870} {RNA1509_54870, RNA815_14647}
11. MligTC455_18687 156 3.25 Mlig455_061195

Neo: -

Age: Down-Down-Up

Region-enriched R5: 2.659/0.04682

 C9orf78 1.688 - - 0.738 - - 0.950 Mlig455_061195 {REF} {Length: 1320} {TRANSSPLICED} {Pfam: Hepatocellular carcinoma-associated antigen 59 [PF07052.13, score=75.1]} {Human: ENSG00000136819, C9orf78, chromosome 9 open reading frame 78, [RH, Score=80.1, Expect=1e-16]} {Mouse: ENSMUSG00000026851, BC005624, cDNA sequence BC005624, [RH, Score=82.8, Expect=8e-18]} {Dmel: FBgn0035254, CG7974, [RH, Score=90.1, Expect=1e-20]} {Smed: dd_Smed_v6_8171_0_1, dd_Smed_v6_8171_0_1, [RH, Score=89.0, Expect=1e-20]} {RNA1509_42392} {RNA1310_25572} {RNA815_11025}
12. MligTC455_28416 134 2.78 Mlig455_031360, Mlig455_056514

Neo: -

Age: -

 1.686 - - - 0.964 - 0.722

Mlig455_031360 {REF} {Length: 267} {NoTransDecoderORF} {RNA1509_28242} {RNA1310_101668} {RNA815_48361}

Mlig455_056514 {REF} {Length: 3270} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1}
13. MligTC455_27509 515 10.73 Mlig455_023080

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.476

 1.653 - - - 0.953 0.700 - Mlig455_023080 {REF} {Length: 2939} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=39.0]; Ankyrin repeats (many copies) [PF13637.8, score=31.8]; Ankyrin repeat [PF00023.32, score=30.0]; Ankyrin repeat [PF13606.8, score=29.3]; Ankyrin repeats (many copies) [PF13857.8, score=24.6]} {Smed: dd_Smed_v6_16174_0_1, dd_Smed_v6_16174_0_1, [Score=48.5, Expect=2e-06]} {RNA1509_26758} {RNA1310_10050} {RNA815_9030.1}
14. MligTC455_25424 101 2.1 Mlig455_048338

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.574

 0.989 - - - 0.989 - - Mlig455_048338 {REF} {Length: 2137} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=53.2]} {Smed: dd_Smed_v6_13661_0_2, dd_Smed_v6_13661_0_2, [Score=108, Expect=2e-29]} {RNA1509_28167} {RNA1310_10604.1} {RNA815_5663}
15. MligTC455_52120 179 3.73 Mlig455_024423, Mlig455_024577

Neo: -

Age: Down-Up-Down

Region-enriched R2: 4.068/0.01755

 POU4F3 0.983 - - - 0.983 - -

Mlig455_024423 {REF} {Length: 1288} {TRANSSPLICED} {Pfam: Pou domain - N-terminal to homeobox domain [PF00157.19, score=104.8]; Homeodomain [PF00046.31, score=60.9]} {Human: ENSG00000091010, POU4F3, POU class 4 homeobox 3, [Score=212, Expect=1e-65]; ENSG00000152192, POU4F1, POU class 4 homeobox 1, [Score=211, Expect=2e-64]} {Mouse: ENSMUSG00000024497, Pou4f3, POU domain, class 4, transcription factor 3, [Score=212, Expect=7e-66]; ENSMUSG00000048349, Pou4f1, POU domain, class 4, transcription factor 1, [Score=211, Expect=2e-64]} {Dmel: FBgn0000028, acj6, abnormal chemosensory jump 6, [Score=209, Expect=2e-64]} {Celegans: WBGene00006818, unc-86, Transcription factor unc-86, [Score=188, Expect=4e-57]} {Smed: dd_Smed_v6_30562_0_1, dd_Smed_v6_30562_0_1, [Score=208, Expect=2e-64]} {RNA1509_57422} {RNA1310_23131} {RNA815_34447}

Mlig455_024577 {REF} {Length: 1325} {TRANSSPLICED} {Pfam: Pou domain - N-terminal to homeobox domain [PF00157.19, score=104.8]; Homeodomain [PF00046.31, score=60.9]} {Human: ENSG00000091010, POU4F3, POU class 4 homeobox 3, [Score=212, Expect=1e-65]; ENSG00000152192, POU4F1, POU class 4 homeobox 1, [Score=211, Expect=2e-64]} {Mouse: ENSMUSG00000024497, Pou4f3, POU domain, class 4, transcription factor 3, [Score=212, Expect=7e-66]; ENSMUSG00000048349, Pou4f1, POU domain, class 4, transcription factor 1, [Score=211, Expect=2e-64]} {Dmel: FBgn0000028, acj6, abnormal chemosensory jump 6, [Score=209, Expect=2e-64]} {Celegans: WBGene00006818, unc-86, Transcription factor unc-86, [Score=188, Expect=4e-57]} {Smed: dd_Smed_v6_30562_0_1, dd_Smed_v6_30562_0_1, [Score=208, Expect=2e-64]} {RNA1509_57422} {RNA1310_23131} {RNA815_34447}
16. MligTC455_05689 31 0.65 Mlig455_050118

Neo: -

Age: -

 0.978 - - - 0.978 - - Mlig455_050118 {REF} {Length: 1063} {RNA1310_14920} {RNA815_35004}
17. MligTC455_51550 460 9.59 Mlig455_039217, Mlig455_053903

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.915

Region-enriched R2: 2.333/0.04047

 0.978 - - - - - 0.978

Mlig455_039217 {REF} {Length: 1773} {TRANSSPLICED} {RNA1509_28709} {RNA1310_23779.1, RNA1509_28709} {RNA1509_28709, RNA815_36053}

Mlig455_053903 {REF} {Length: 1761} {TRANSSPLICED} {RNA1509_28709} {RNA1310_23779.1} {RNA815_36053}
18. MligTC455_23314 139 2.9 Mlig455_039680

Neo: -

Age: -

 CACNA2D2 0.977 - - - 0.977 - - Mlig455_039680 {REF} {Length: 4498} {Pfam: VWA N-terminal [PF08399.13, score=89.9]; Neuronal voltage-dependent calcium channel alpha 2acd [PF08473.13, score=86.3]; von Willebrand factor type A domain [PF13768.8, score=38.0]; von Willebrand factor type A domain [PF00092.30, score=36.1]; von Willebrand factor type A domain [PF13519.8, score=31.5]; Cache domain [PF02743.20, score=26.9]} {Human: ENSG00000007402, CACNA2D2, calcium voltage-gated channel auxiliary subunit alpha2delta 2, [RH, Score=340, Expect=6e-98]; ENSG00000153956, CACNA2D1, calcium voltage-gated channel auxiliary subunit alpha2delta 1, [RH, Score=328, Expect=3e-94]} {Mouse: ENSMUSG00000010066, Cacna2d2, calcium channel, voltage-dependent, alpha 2/delta subunit 2, [RH, Score=338, Expect=1e-97]; ENSMUSG00000040118, Cacna2d1, calcium channel, voltage-dependent, alpha2/delta subunit 1, [RH, Score=330, Expect=4e-95]} {Dmel: FBgn0028863, CG4587, [RH, Score=234, Expect=2e-62]} {Celegans: WBGene00007041, tag-180, [RH, Score=169, Expect=3e-42]} {Smed: dd_Smed_v6_19048_0_1, dd_Smed_v6_19048_0_1, [Score=155, Expect=5e-38]} {RNA1509_48733} {RNA1310_3844, RNA1509_48733} {RNA1509_48733, RNA815_18071}
19. MligTC455_49081 472 9.84 Mlig455_068529

Neo: -

Age: -

Region-enriched R5: 1.779/0.02721

 CANX 0.971 - - - - - 0.971 Mlig455_068529 {REF} {Length: 2120} {TRANSSPLICED} {Pfam: Calreticulin family [PF00262.20, score=463.2]} {Human: ENSG00000127022, CANX, calnexin, [Score=479, Expect=5e-163]; ENSG00000283777, CANX, calnexin, [Score=479, Expect=5e-163]} {Mouse: ENSMUSG00000020368, Canx, calnexin, [Score=468, Expect=1e-158]} {Dmel: FBgn0015622, Cnx99A, Calnexin 99A, [Score=402, Expect=4e-133]} {Celegans: WBGene00000567, cnx-1, Calnexin, [Score=391, Expect=1e-128]} {Smed: dd_Smed_v6_632_0_1, dd_Smed_v6_632_0_1, [Score=517, Expect=4e-178]} {RNA1509_44465} {RNA1310_13618.2} {RNA815_14640}
20. MligTC455_22933 497 10.36 Mlig455_043362

Neo: -

Age: -

 CNPY2 0.969 - - - - - 0.969 Mlig455_043362 {REF} {Length: 2002} {TRANSSPLICED} {Pfam: TLR4 regulator and MIR-interacting MSAP [PF11938.10, score=79.6]} {Human: ENSG00000257727, CNPY2, canopy FGF signaling regulator 2, [RH, Score=70.5, Expect=2e-14]; ENSG00000144785, AC073896.1, novel protein, [RH, Score=69.7, Expect=2e-13]} {Mouse: ENSMUSG00000025381, Cnpy2, canopy FGF signaling regulator 2, [RH, Score=68.2, Expect=1e-13]} {Celegans: WBGene00017169, F01F1.15, [Score=56.6, Expect=1e-09]} {RNA1509_46925, RNA1509_52897} {RNA1310_13660.1, RNA1509_46925, RNA1509_52897} {RNA1509_46925, RNA1509_52897, RNA815_7407.1}
21. MligTC455_32863 188 3.91 Mlig455_028353

Neo: Int S/G2/M

Age: Up-Up-Down

 0.968 - - - - - 0.968 Mlig455_028353 {REF} {Length: 1978} {TRANSSPLICED} {RNA1509_40955} {RNA1310_60768} {RNA815_8954.1}
22. MligTC455_33868 554 11.55 Mlig455_005238

Neo: -

Age: -

 MED13 0.968 - - - - - 0.968 Mlig455_005238 {REF} {Length: 7105} {Pfam: Mediator complex subunit 13 C-terminal domain [PF06333.14, score=204.1]; Mediator complex subunit 13 N-terminal [PF11597.10, score=49.4]} {Human: ENSG00000108510, MED13, mediator complex subunit 13, [RH, Score=213, Expect=1e-54]; ENSG00000123066, MED13L, mediator complex subunit 13 like, [RH, Score=203, Expect=9e-52]} {Mouse: ENSMUSG00000034297, Med13, mediator complex subunit 13, [RH, Score=213, Expect=6e-55]} {Dmel: FBgn0003415, skd, skuld, [RH, Score=199, Expect=1e-50]} {Celegans: WBGene00002295, let-19, Mediator of RNA polymerase II transcription subunit 13, [RH, Score=145, Expect=2e-34]} {Smed: dd_Smed_v6_5628_0_1, dd_Smed_v6_5628_0_1, [RH, Score=176, Expect=4e-44]} {RNA1509_5621} {RNA1310_887, RNA1509_5621} {RNA1509_5621, RNA815_2444}
23. MligTC455_51549 114 2.37 Mlig455_039237

Neo: -

Age: Down-Down-Up

Regeneration-upregulated TP: 6.202

Regeneration-enriched TP: 6.202

 0.968 - - - - - 0.968 Mlig455_039237 {REF} {Length: 3108} {RNA1509_28709} {RNA1310_23779.2} {RNA815_36053}
24. MligTC455_46979 393 8.19 Mlig455_006015

Neo: -

Age: -

Region-enriched R5: 2.218/0.00021

 SLC25A51 0.967 - - - - - 0.967 Mlig455_006015 {REF} {Length: 2639} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=119.4]} {Human: ENSG00000122696, SLC25A51, solute carrier family 25 member 51, [RH, Score=213, Expect=1e-67]} {Mouse: ENSMUSG00000045973, Slc25a51, solute carrier family 25, member 51, [RH, Score=208, Expect=1e-65]} {Dmel: FBgn0039741, CG7943, [RH, Score=173, Expect=6e-52]} {Celegans: WBGene00011858, T20D3.5, [RH, Score=142, Expect=1e-41]} {Smed: dd_Smed_v6_8610_0_1, dd_Smed_v6_8610_0_1, [RH, Score=186, Expect=7e-58]} {RNA1509_15551, RNA1509_34914, RNA1509_51591, RNA1509_53073} {RNA1310_23947, RNA1509_15551, RNA1509_34914, RNA1509_51591, RNA1509_53073} {RNA1509_15551, RNA1509_34914, RNA1509_51591, RNA1509_53073, RNA815_5386}
25. MligTC455_47892 119 2.49 Mlig455_054967

Neo: -

Age: -

Region-enriched R5: 2.180/0.01611

 WDR37 0.966 - - - - - 0.966 Mlig455_054967 {REF} {Length: 3048} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=77.8]} {Human: ENSG00000047056, WDR37, WD repeat domain 37, [RH, Score=201, Expect=9e-57]} {Mouse: ENSMUSG00000021147, Wdr37, WD repeat domain 37, [RH, Score=204, Expect=5e-58]} {Dmel: FBgn0038617, CG12333, [RH, Score=195, Expect=4e-55]} {Celegans: WBGene00015470, C05D2.10, [RH, Score=173, Expect=3e-47]} {Smed: dd_Smed_v6_3313_0_1, dd_Smed_v6_3313_0_1, [RH, Score=180, Expect=4e-49]} {RNA1509_16552} {RNA1310_18365} {RNA815_26613}
26. MligTC455_21822 215 4.48 Mlig455_013947

Neo: -

Age: Down-Up-Down

 0.965 - - - 0.965 - - Mlig455_013947 {REF} {Length: 3269} {RNA1509_12460, RNA1509_29876} {RNA1310_5676, RNA1509_29876} {RNA1509_29876, RNA815_2024}
27. MligTC455_31299 699 14.57 Mlig455_068122

Neo: Neoblast, stringent

Age: Up-Down-Up

Regeneration-upregulated R6: 1.741

Regeneration-enriched R6: 1.741

 NUP160 0.962 - - 0.962 - - - Mlig455_068122 {REF} {Length: 5376} {Pfam: Nucleoporin Nup120/160 [PF11715.10, score=42.4]} {Human: ENSG00000285358, NUP160, nucleoporin 160, [RH, Score=194, Expect=2e-49]; ENSG00000030066, NUP160, nucleoporin 160, [RH, Score=194, Expect=2e-49]} {Mouse: ENSMUSG00000051329, Nup160, nucleoporin 160, [RH, Score=198, Expect=1e-50]} {Dmel: FBgn0262647, Nup160, Nucleoporin 160kD, [RH, Score=147, Expect=5e-35]} {RNA1509_5873} {RNA1310_964, RNA1509_5873} {RNA1509_5873, RNA815_10041}
28. MligTC455_49628 82 1.7 Mlig455_043447

Neo: -

Age: -

 SLC16A12 0.962 - - - - - 0.962 Mlig455_043447 {REF} {Length: 5313} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=105.0]} {Human: ENSG00000152779, SLC16A12, solute carrier family 16 member 12, [Score=114, Expect=5e-26]; ENSG00000163053, SLC16A14, solute carrier family 16 member 14, [Score=114, Expect=5e-26]} {Mouse: ENSMUSG00000009378, Slc16a12, solute carrier family 16 (monocarboxylic acid transporters), member 12, [Score=118, Expect=1e-27]} {Dmel: FBgn0035173, CG13907, [Score=336, Expect=9e-103]} {Celegans: WBGene00003986, mct-4, MonoCarboxylate Transporter family, [Score=295, Expect=8e-89]} {Smed: dd_Smed_v6_10147_0_4, dd_Smed_v6_10147_0_4, [RH, Score=409, Expect=2e-128]} {RNA1509_13827, RNA1509_17254, RNA1509_27907} {RNA1310_5615, RNA1509_13827, RNA1509_17254, RNA1509_27907} {RNA1509_13827, RNA1509_17254, RNA1509_27907, RNA815_8392}
29. MligTC455_33101 89 1.85 Mlig455_064071, Mlig455_064992

Neo: -

Age: -

 0.96 - - - - - 0.960

Mlig455_064071 {REF} {Length: 3613} {RNA1509_56890} {RNA1310_43571.1} {RNA815_52616}

Mlig455_064992 {REF} {Length: 2928} {NoTransDecoderORF} {RNA1509_56890} {RNA1310_43571.1} {RNA815_52616}
30. MligTC455_16410 313 6.52 Mlig455_053945

Neo: -

Age: -

 0.959 - - - - - 0.959 Mlig455_053945 {REF} {Length: 550} {NoTransDecoderORF} {RNA1509_49687, RNA1509_58070} {RNA1310_67924, RNA1509_58070} {RNA1509_58070, RNA815_48743}
31. MligTC455_18174 383 7.98 Mlig455_064745

Neo: -

Age: Up-Down-Down

Region-enriched R5: 1.035/0.02461

 LMO7 0.959 - - - - - 0.959 Mlig455_064745 {REF} {Length: 5455} {TRANSSPLICED} {Pfam: Calponin homology (CH) domain [PF00307.33, score=47.7]; LIM domain [PF00412.24, score=27.8]; CAMSAP CH domain [PF11971.10, score=20.1]} {Human: ENSG00000136153, LMO7, LIM domain 7, [RH, Score=94.7, Expect=4e-19]} {Mouse: ENSMUSG00000033060, Lmo7, LIM domain only 7, [RH, Score=93.2, Expect=8e-19]} {Dmel: FBgn0263346, CG43427, [RH, Score=130, Expect=2e-30]} {Celegans: WBGene00017904, lim-8, LIM domain family, [RH, Score=116, Expect=4e-26]} {Smed: dd_Smed_v6_10011_0_2, dd_Smed_v6_10011_0_2, [Score=80.5, Expect=3e-15]} {RNA1509_28988, RNA1509_58786} {RNA1310_10382, RNA1509_28988, RNA1509_58786} {RNA1509_28988, RNA1509_58786, RNA815_2775.1}
32. MligTC455_47089 141 2.95 Mlig455_044898

Neo: Irradiation

Age: -

 CSNK2A2 0.958 - - - - - 0.958 Mlig455_044898 {REF} {Length: 2031} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=158.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=53.4]} {Human: ENSG00000070770, CSNK2A2, casein kinase 2 alpha 2, [Score=116, Expect=8e-29]; ENSG00000254598, CSNK2A3, casein kinase 2 alpha 3, [Score=113, Expect=2e-27]; ENSG00000101266, CSNK2A1, casein kinase 2 alpha 1, [Score=112, Expect=3e-27]} {Mouse: ENSMUSG00000046707, Csnk2a2, casein kinase 2, alpha prime polypeptide, [Score=115, Expect=8e-29]; ENSMUSG00000074698, Csnk2a1, casein kinase 2, alpha 1 polypeptide, [Score=112, Expect=3e-27]; ENSMUSG00000101523, Gm10031, predicted pseudogene 10031, [Score=112, Expect=3e-27]} {Dmel: FBgn0264492, CkIIalpha, casein kinase IIalpha, [Score=112, Expect=9e-28]} {Celegans: WBGene00016421, cdc-7, Cell Division Cycle related, [RH, Score=103, Expect=3e-24]} {Smed: dd_Smed_v6_16034_0_1, dd_Smed_v6_16034_0_1, [RH, Score=204, Expect=5e-62]} {RNA1509_42628} {RNA1310_28036.1} {RNA815_26786}
33. MligTC455_37166 37 0.76 Mlig455_047906

Neo: -

Age: -

 0.957 - - - - - 0.957 Mlig455_047906 {REF} {Length: 2210} {NoTransDecoderORF} {RNA1310_55977}
34. MligTC455_11852 209 4.36 Mlig455_043128

Neo: Irradiation

Age: Up-Down-Down

 ANAPC1 0.954 - - - - - 0.954 Mlig455_043128 {REF} {Length: 8060} {TRANSSPLICED} {Pfam: Anaphase-promoting complex subunit 1 [PF12859.9, score=21.8]} {Human: ENSG00000153107, ANAPC1, anaphase promoting complex subunit 1, [RH, Score=205, Expect=4e-52]} {Mouse: ENSMUSG00000014355, Anapc1, anaphase promoting complex subunit 1, [RH, Score=206, Expect=1e-52]} {Dmel: FBgn0004391, shtd, shattered, [RH, Score=214, Expect=3e-55]} {Celegans: WBGene00003133, mat-2, Anaphase-promoting complex subunit 1, [RH, Score=179, Expect=9e-45]} {Smed: dd_Smed_v6_8329_0_1, dd_Smed_v6_8329_0_1, [RH, Score=162, Expect=1e-40]} {RNA1509_56813, RNA1509_9751} {RNA1310_441.1, RNA1509_56813} {RNA1509_56813, RNA815_441.1}
35. MligTC455_31541 217 4.53 Mlig455_009621

Neo: -

Age: Up-Down-Down

 CPSF1 0.954 - - - - - 0.954 Mlig455_009621 {REF} {Length: 7493} {TRANSSPLICED} {Pfam: CPSF A subunit region [PF03178.17, score=217.3]; Mono-functional DNA-alkylating methyl methanesulfonate N-term [PF10433.11, score=80.2]} {Human: ENSG00000071894, CPSF1, cleavage and polyadenylation specific factor 1, [RH, Score=567, Expect=4e-173]; ENSG00000285049, CPSF1, cleavage and polyadenylation specific factor 1, [RH, Score=567, Expect=4e-173]} {Mouse: ENSMUSG00000034022, Cpsf1, cleavage and polyadenylation specific factor 1, [RH, Score=570, Expect=3e-174]} {Dmel: FBgn0024698, Cpsf160, Cleavage and polyadenylation specificity factor 160, [RH, Score=473, Expect=8e-140]} {Celegans: WBGene00022301, cpsf-1, Probable cleavage and polyadenylation specificity factor subunit 1, [RH, Score=364, Expect=5e-103]} {Smed: dd_Smed_v6_8644_0_1, dd_Smed_v6_8644_0_1, [RH, Score=468, Expect=1e-137]} {RNA1509_5909} {RNA1310_503.1} {RNA815_575.1}
36. MligTC455_22542 99 2.06 Mlig455_024204

Neo: -

Age: logFC(26M/2M)=-0.480

 0.952 - - - 0.952 - - Mlig455_024204 {REF} {Length: 3023} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=139.9]} {Celegans: WBGene00003168, mec-4, Degenerin mec-4, [Score=59.3, Expect=8e-09]} {Smed: dd_Smed_v6_17245_0_1, dd_Smed_v6_17245_0_1, [Score=102, Expect=2e-22]} {RNA1509_39836} {RNA1310_9102.1, RNA1509_39836} {RNA1509_39836, RNA815_18669}
37. MligTC455_30551 1025 21.35 Mlig455_023090, Mlig455_027761, Mlig455_039963

Neo: -

Age: -

 MAP3K19, MAP3K4, TNKS2 0.952 - - - 0.952 - -

Mlig455_023090 {REF} {Length: 1558} {Pfam: Protein kinase domain [PF00069.27, score=168.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=125.5]; Fungal protein kinase [PF17667.3, score=29.9]; Phosphotransferase enzyme family [PF01636.25, score=23.8]; ABC1 atypical kinase-like domain [PF03109.18, score=20.6]} {Human: ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=134, Expect=3e-34]} {Mouse: ENSMUSG00000014426, Map3k4, mitogen-activated protein kinase kinase kinase 4, [Score=129, Expect=7e-33]; ENSMUSG00000028862, Map3k6, mitogen-activated protein kinase kinase kinase 6, [Score=125, Expect=2e-31]} {Dmel: FBgn0024329, Mekk1, [Score=129, Expect=7e-33]} {Celegans: WBGene00003472, mtk-1, MTK1/MEKK4 homolog, [Score=130, Expect=2e-33]} {Smed: dd_Smed_v6_5198_0_1, dd_Smed_v6_5198_0_1, [Score=108, Expect=3e-26]} {RNA1509_25366, RNA1509_28291, RNA1509_39879} {RNA1310_39116, RNA1509_25366, RNA1509_39879} {RNA1509_25366, RNA1509_39879, RNA815_9030.1}

Mlig455_027761 {REF} {Length: 3012} {Pfam: Protein kinase domain [PF00069.27, score=167.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=125.0]; Ankyrin repeats (3 copies) [PF12796.9, score=85.2]; Ankyrin repeats (many copies) [PF13637.8, score=60.2]; Ankyrin repeat [PF00023.32, score=56.0]; Ankyrin repeat [PF13606.8, score=54.2]; Ankyrin repeats (many copies) [PF13857.8, score=53.2]; Fungal protein kinase [PF17667.3, score=27.7]; ABC1 atypical kinase-like domain [PF03109.18, score=23.8]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=132, Expect=3e-32]; ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=130, Expect=2e-30]; ENSG00000142733, MAP3K6, mitogen-activated protein kinase kinase kinase 6, [Score=127, Expect=1e-29]} {Mouse: ENSMUSG00000028862, Map3k6, mitogen-activated protein kinase kinase kinase 6, [Score=130, Expect=9e-31]; ENSMUSG00000014426, Map3k4, mitogen-activated protein kinase kinase kinase 4, [Score=125, Expect=6e-29]} {Dmel: FBgn0024329, Mekk1, [Score=128, Expect=4e-30]} {Celegans: WBGene00006443, pak-2, Serine/threonine-protein kinase pak-2, [Score=105, Expect=8e-24]} {Smed: dd_Smed_v6_4849_0_1, dd_Smed_v6_4849_0_1, [Score=109, Expect=1e-24]} {RNA1509_27731} {RNA1310_10050} {RNA815_9030.1}

Mlig455_039963 {REF} {Length: 912} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=78.3]; Ankyrin repeat [PF13606.8, score=60.2]; Ankyrin repeats (many copies) [PF13637.8, score=56.1]; Ankyrin repeats (many copies) [PF13857.8, score=50.9]; Ankyrin repeat [PF00023.32, score=46.6]; Protein kinase domain [PF00069.27, score=37.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=30.6]} {Human: ENSG00000107854, TNKS2, tankyrase 2, [Score=68.2, Expect=2e-11]} {Mouse: ENSMUSG00000024811, Tnks2, tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2, [Score=66.2, Expect=6e-11]} {Dmel: FBgn0027508, Tnks, tankyrase, [Score=52.4, Expect=9e-07]} {Celegans: WBGene00006941, wnk-1, Serine/threonine-protein kinase WNK, [Score=49.3, Expect=7e-06]} {Smed: dd_Smed_v6_6201_0_1, dd_Smed_v6_6201_0_1, [Score=57.0, Expect=2e-08]} {RNA1509_39395} {RNA1310_28166} {RNA815_10088.2}
38. MligTC455_45828 282 5.88 Mlig455_038865

Neo: -

Age: -

 AARS2 0.951 - - 0.951 - - - Mlig455_038865 {REF} {Length: 3448} {TRANSSPLICED} {Pfam: tRNA synthetases class II (A) [PF01411.21, score=353.7]; Threonyl and Alanyl tRNA synthetase second additional domain [PF07973.16, score=25.5]} {Human: ENSG00000124608, AARS2, alanyl-tRNA synthetase 2, mitochondrial, [Score=421, Expect=2e-130]} {Mouse: ENSMUSG00000023938, Aars2, alanyl-tRNA synthetase 2, mitochondrial, [Score=441, Expect=9e-138]} {Dmel: FBgn0027094, AlaRS, Alanyl-tRNA synthetase, [Score=409, Expect=3e-126]} {Celegans: WBGene00000197, aars-2, Alanine--tRNA ligase, cytoplasmic, [Score=421, Expect=7e-131]} {Smed: dd_Smed_v6_4233_0_1, dd_Smed_v6_4233_0_1, [Score=421, Expect=7e-131]} {RNA1509_11036} {RNA1310_3138.1} {RNA815_933}
39. MligTC455_50511 110 2.29 Mlig455_039703

Neo: -

Age: Up-Down-Up

 HDAC11 0.951 - - - - - 0.951 Mlig455_039703 {REF} {Length: 1381} {TRANSSPLICED} {Pfam: Histone deacetylase domain [PF00850.21, score=162.9]} {Human: ENSG00000163517, HDAC11, histone deacetylase 11, [Score=369, Expect=2e-127]} {Mouse: ENSMUSG00000034245, Hdac11, histone deacetylase 11, [Score=368, Expect=3e-127]} {Dmel: FBgn0051119, HDAC11, Histone deacetylase 11, [RH, Score=326, Expect=7e-111]} {Celegans: WBGene00007953, hda-11, Histone DeAcetylase, [RH, Score=313, Expect=9e-106]} {Smed: dd_Smed_v6_3401_0_4, dd_Smed_v6_3401_0_4, [Score=303, Expect=3e-102]} {RNA1310_29298} {RNA815_14482}
40. MligTC455_42646 265 5.53 Mlig455_046692

Neo: -

Age: -

Region-enriched R2: 2.509/0.02015

 KRT8 0.95 - - - 0.950 - - Mlig455_046692 {REF} {Length: 3581} {TRANSSPLICED} {Pfam: Intermediate filament protein [PF00038.23, score=144.4]; Protein of unknown function (DUF3450) [PF11932.10, score=22.6]; BRE1 E3 ubiquitin ligase [PF08647.13, score=19.7]; Bacillus haemolytic enterotoxin (HBL) [PF05791.13, score=18.9]; Afadin- and alpha -actinin-Binding [PF11559.10, score=18.7]; Crescentin protein [PF19220.2, score=18.6]} {Human: ENSG00000170421, KRT8, keratin 8, [RH, Score=111, Expect=2e-25]} {Mouse: ENSMUSG00000063661, Krt73, keratin 73, [RH, Score=107, Expect=3e-24]} {Dmel: FBgn0010397, LamC, Lamin C, [Score=140, Expect=4e-35]} {Celegans: WBGene00002050, ifa-1, Intermediate filament protein ifa-1, [Score=251, Expect=7e-76]} {Smed: dd_Smed_v6_3871_0_1, dd_Smed_v6_3871_0_1, [Score=275, Expect=4e-85]} {RNA1310_10400} {RNA815_12264}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA