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Results for MligTC455_33101

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_33101 89 1.85 Mlig455_064071, Mlig455_064992

Neo: -

Age: -

Mlig455_064071 {REF} {Length: 3613} {RNA1509_56890} {RNA1310_43571.1} {RNA815_52616}

Mlig455_064992 {REF} {Length: 2928} {NoTransDecoderORF} {RNA1509_56890} {RNA1310_43571.1} {RNA815_52616}

Cumulative graph for MligTC455_33101

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.39 1.693 0.99977 1.00000
RegionR2 2.943 1.693 0.05124 0.27060
RegionR3 -1.857 1.693 0.99989 1.00000
RegionR4 -0.735 1.693 0.79179 1.00000
RegionR5 2.215 1.693 0.04613 0.17688
RegionR6 2.117 1.693 0.12076 0.63350
RegionR7 2.508 1.693 0.11710 0.64670
RegionR8 -2.801 1.693 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.607 1.693 0.99998 1.00000
RegenerationR2 0.769 1.693 0.39462 0.81136
RegenerationR3 4.238 1.693 0.00881 0.17206
RegenerationR4 2.659 1.693 0.02078 0.22830
RegenerationR5 1.346 1.693 0.14666 0.56316
RegenerationR6 1.21 1.693 0.29085 0.64105
RegenerationBL 2.449 1.693 0.14617 0.45662
RegenerationTP 3.952 1.693 0.03116 0.29640


Genes with expression patterns similar to MligTC455_33101

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_33101 89 1.85 Mlig455_064071, Mlig455_064992

Neo: -

Age: -

 5 1.000 - 1.000 1.000 1.000 1.000

Mlig455_064071 {REF} {Length: 3613} {RNA1509_56890} {RNA1310_43571.1} {RNA815_52616}

Mlig455_064992 {REF} {Length: 2928} {NoTransDecoderORF} {RNA1509_56890} {RNA1310_43571.1} {RNA815_52616}
2. MligTC455_51246 58 1.2 Mlig455_014016

Neo: -

Age: -

 1.874 - - - - 0.954 0.920 Mlig455_014016 {REF} {Length: 2834} {NoTransDecoderORF} {RNA1509_57004} {RNA1310_22299} {RNA815_15623}
3. MligTC455_15756 43 0.89 Mlig455_006996

Neo: -

Age: -

 1.75 0.777 - - - - 0.973 Mlig455_006996 {REF} {Length: 571} {Pfam: SEA domain [PF01390.22, score=24.1]; Predicted membrane protein (DUF2107) [PF09880.11, score=19.3]} {RNA1509_58111, RNA1509_58578} {RNA1310_40223, RNA1509_58111} {RNA1509_58111, RNA815_37309}
4. MligTC455_45282 120 2.51 Mlig455_022495

Neo: -

Age: logFC(26M/2M)=-0.905

Regeneration-upregulated R5: 3.402

Regeneration-enriched R5: 3.402

 RUNX1 1.731 - - - 0.749 - 0.982 Mlig455_022495 {REF} {Length: 2067} {Pfam: Runt domain [PF00853.21, score=201.8]} {Human: ENSG00000159216, RUNX1, runt related transcription factor 1, [RH, Score=182, Expect=2e-52]; ENSG00000124813, RUNX2, runt related transcription factor 2, [RH, Score=178, Expect=8e-51]; ENSG00000020633, RUNX3, runt related transcription factor 3, [RH, Score=176, Expect=1e-50]} {Mouse: ENSMUSG00000022952, Runx1, runt related transcription factor 1, [RH, Score=182, Expect=1e-52]; ENSMUSG00000039153, Runx2, runt related transcription factor 2, [RH, Score=178, Expect=7e-51]; ENSMUSG00000070691, Runx3, runt related transcription factor 3, [RH, Score=174, Expect=3e-50]} {Dmel: FBgn0003300, run, runt, [RH, Score=186, Expect=6e-54]} {Celegans: WBGene00004393, rnt-1, RNT-1; RuNT related; Transcription factor RUN, [RH, Score=132, Expect=1e-35]} {Smed: dd_Smed_v6_3565_0_2, dd_Smed_v6_3565_0_2, [RH, Score=157, Expect=6e-46]} {RNA1310_31193} {RNA815_45065}
5. MligTC455_28153 87 1.82 Mlig455_023355

Neo: -

Age: Down-Up-Down

 1.707 - - - - 0.757 0.950 Mlig455_023355 {REF} {Length: 2641} {Pfam: HTH domain in Mos1 transposase [PF17906.3, score=23.0]} {RNA1509_36436} {RNA1310_24275.2} {RNA815_11419.1}
6. MligTC455_45116 160 3.34 Mlig455_013593

Neo: -

Age: Down-Up-Down

Region-enriched R5: 2.671/0.00707

 ZNF277 1.701 - - - 0.749 - 0.952 Mlig455_013593 {REF} {Length: 2093} {TRANSSPLICED} {Pfam: C2H2 type zinc-finger (2 copies) [PF12756.9, score=87.5]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=28.3]} {Human: ENSG00000198839, ZNF277, zinc finger protein 277, [RH, Score=124, Expect=5e-32]} {Mouse: ENSMUSG00000055917, Zfp277, zinc finger protein 277, [RH, Score=118, Expect=8e-29]} {Dmel: FBgn0034814, CG9890, [RH, Score=130, Expect=3e-33]} {Celegans: WBGene00009772, ztf-7, Zinc finger putative Transcription Factor family, [RH, Score=116, Expect=8e-28]} {RNA1509_8883} {RNA1310_20393} {RNA815_9523}
7. MligTC455_11211 64 1.33 Mlig455_014750

Neo: -

Age: -

 0.978 - - - - - 0.978 Mlig455_014750 {REF} {Length: 809} {NoTransDecoderORF} {RNA1509_24925, RNA1509_33762} {RNA1310_64582, RNA1509_33762} {RNA1509_33762, RNA815_39421}
8. MligTC455_01710 41 0.85 Mlig455_013827

Neo: -

Age: -

 0.977 - - - - - 0.977 Mlig455_013827 {REF} {Length: 2546} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=29.2]} {RNA1310_100507} {RNA815_49026}
9. MligTC455_30249 100 2.09 Mlig455_009659, Mlig455_048381

Neo: -

Age: -

 0.977 - - - - - 0.977

Mlig455_009659 {REF} {Length: 3024} {Pfam: Primase C terminal 2 (PriCT-2) [PF08707.13, score=46.3]} {RNA1509_20194} {RNA1310_3607.1} {RNA815_37227}

Mlig455_048381 {REF} {Length: 832} {RNA1509_33034} {RNA1310_614.1} {RNA815_31436}
10. MligTC455_32612 55 1.15 Mlig455_015630

Neo: -

Age: -

Region-enriched R2: 5.626/0.02523

 ARX 0.976 - - - - - 0.976 Mlig455_015630 {REF} {Length: 2012} {Pfam: Homeodomain [PF00046.31, score=83.5]} {Human: ENSG00000004848, ARX, aristaless related homeobox, [RH, Score=134, Expect=1e-34]} {Mouse: ENSMUSG00000035277, Arx, aristaless related homeobox, [RH, Score=133, Expect=1e-34]} {Dmel: FBgn0000061, al, aristaless, [RH, Score=130, Expect=3e-34]} {Celegans: WBGene00044330, alr-1, AristaLess (Drosophila homeodomain) Related, [RH, Score=118, Expect=2e-30]} {Smed: dd_Smed_v6_63359_0_1, dd_Smed_v6_63359_0_1, [Score=119, Expect=3e-33]} {RNA1310_42333.1} {RNA815_48205}
11. MligTC455_48030 242 5.05 Mlig455_068309

Neo: -

Age: -

Regeneration-upregulated BL: 4.179

Regeneration-enriched BL: 4.179

 SPSB4 0.975 - - - - - 0.975 Mlig455_068309 {REF} {Length: 2561} {TRANSSPLICED} {Pfam: SPRY domain [PF00622.30, score=64.3]; SOCS box [PF07525.18, score=33.5]} {Human: ENSG00000175093, SPSB4, splA/ryanodine receptor domain and SOCS box containing 4, [Score=315, Expect=2e-106]; ENSG00000171621, SPSB1, splA/ryanodine receptor domain and SOCS box containing 1, [Score=312, Expect=2e-105]} {Mouse: ENSMUSG00000039911, Spsb1, splA/ryanodine receptor domain and SOCS box containing 1, [Score=313, Expect=4e-106]; ENSMUSG00000046997, Spsb4, splA/ryanodine receptor domain and SOCS box containing 4, [Score=311, Expect=4e-105]} {Dmel: FBgn0026238, gus, gustavus, [Score=307, Expect=1e-103]} {Celegans: WBGene00021597, spsb-1, SPSB (SPry and Socs Box) family, [RH, Score=261, Expect=8e-84]} {Smed: dd_Smed_v6_9905_0_1, dd_Smed_v6_9905_0_1, [Score=213, Expect=1e-66]} {RNA1509_26491} {RNA1310_11847} {RNA815_5105}
12. MligTC455_47089 141 2.95 Mlig455_044898

Neo: Irradiation

Age: -

 CSNK2A2 0.973 - - - - - 0.973 Mlig455_044898 {REF} {Length: 2031} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=158.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=53.4]} {Human: ENSG00000070770, CSNK2A2, casein kinase 2 alpha 2, [Score=116, Expect=8e-29]; ENSG00000254598, CSNK2A3, casein kinase 2 alpha 3, [Score=113, Expect=2e-27]; ENSG00000101266, CSNK2A1, casein kinase 2 alpha 1, [Score=112, Expect=3e-27]} {Mouse: ENSMUSG00000046707, Csnk2a2, casein kinase 2, alpha prime polypeptide, [Score=115, Expect=8e-29]; ENSMUSG00000074698, Csnk2a1, casein kinase 2, alpha 1 polypeptide, [Score=112, Expect=3e-27]; ENSMUSG00000101523, Gm10031, predicted pseudogene 10031, [Score=112, Expect=3e-27]} {Dmel: FBgn0264492, CkIIalpha, casein kinase IIalpha, [Score=112, Expect=9e-28]} {Celegans: WBGene00016421, cdc-7, Cell Division Cycle related, [RH, Score=103, Expect=3e-24]} {Smed: dd_Smed_v6_16034_0_1, dd_Smed_v6_16034_0_1, [RH, Score=204, Expect=5e-62]} {RNA1509_42628} {RNA1310_28036.1} {RNA815_26786}
13. MligTC455_08392 75 1.56 Mlig455_022901

Neo: Int S/G2/M

Age: -

 METTL5 0.969 - - - - - 0.969 Mlig455_022901 {REF} {Length: 1606} {TRANSSPLICED} {Pfam: mRNA cap methylation, RNMT-activating mini protein [PF15320.8, score=41.1]; Methyltransferase domain [PF13649.8, score=37.5]; Methyltransferase small domain [PF05175.16, score=25.8]; Methyltransferase domain [PF13847.8, score=25.2]; Ribosomal protein L11 methyltransferase (PrmA) [PF06325.15, score=24.6]; Methyltransferase domain [PF08241.14, score=22.7]; Methyltransferase domain [PF08242.14, score=19.4]; Putative RNA methylase family UPF0020 [PF01170.20, score=18.7]} {Human: ENSG00000138382, METTL5, methyltransferase like 5, [RH, Score=115, Expect=3e-30]} {Mouse: ENSMUSG00000051730, Mettl5, methyltransferase like 5, [RH, Score=113, Expect=1e-29]} {Dmel: FBgn0036856, CG9666, [RH, Score=110, Expect=1e-28]} {Celegans: WBGene00008008, C38D4.9, [RH, Score=85.1, Expect=3e-19]} {Smed: dd_Smed_v6_10068_0_1, dd_Smed_v6_10068_0_1, [RH, Score=142, Expect=9e-41]} {RNA1509_19099} {RNA1310_26048} {RNA815_13141}
14. MligTC455_50511 110 2.29 Mlig455_039703

Neo: -

Age: Up-Down-Up

 HDAC11 0.969 - - - - - 0.969 Mlig455_039703 {REF} {Length: 1381} {TRANSSPLICED} {Pfam: Histone deacetylase domain [PF00850.21, score=162.9]} {Human: ENSG00000163517, HDAC11, histone deacetylase 11, [Score=369, Expect=2e-127]} {Mouse: ENSMUSG00000034245, Hdac11, histone deacetylase 11, [Score=368, Expect=3e-127]} {Dmel: FBgn0051119, HDAC11, Histone deacetylase 11, [RH, Score=326, Expect=7e-111]} {Celegans: WBGene00007953, hda-11, Histone DeAcetylase, [RH, Score=313, Expect=9e-106]} {Smed: dd_Smed_v6_3401_0_4, dd_Smed_v6_3401_0_4, [Score=303, Expect=3e-102]} {RNA1310_29298} {RNA815_14482}
15. MligTC455_14961 39 0.82 Mlig455_048867

Neo: -

Age: -

 0.967 - - - - - 0.967 Mlig455_048867 {REF} {Length: 979} {NoTransDecoderORF} {RNA1310_98124}
16. MligTC455_16579 192 4 Mlig455_002494

Neo: -

Age: logFC(26M/2M)=0.292

 0.966 - - - - - 0.966 Mlig455_002494 {REF} {Length: 4108} {Mouse: ENSMUSG00000020154, Ptprb, protein tyrosine phosphatase, receptor type, B, [Score=55.8, Expect=3e-07]} {RNA1509_28509} {RNA1310_14831.1} {RNA815_5519.1}
17. MligTC455_38114 228 4.74 Mlig455_012774, Mlig455_070139

Neo: -

Age: -

 0.966 - - - - - 0.966

Mlig455_012774 {REF} {Length: 1873} {NoTransDecoderORF} {RNA1509_58500} {RNA1310_34010} {RNA815_56430}

Mlig455_070139 {REF} {Length: 863} {NoTransDecoderORF} {RNA1509_58500} {RNA1310_49425} {RNA815_65230}
18. MligTC455_46399 80 1.66 Mlig455_022117

Neo: -

Age: Up-Up-Down

 0.965 - - 0.965 - - - Mlig455_022117 {REF} {Length: 1088} {TRANSSPLICED} {RNA1310_7748.1} {RNA815_21787}
19. MligTC455_46464 37 0.77 Mlig455_015896

Neo: -

Age: -

Region-enriched R5: 3.599/0.02898

 ADAT2 0.965 - - - - - 0.965 Mlig455_015896 {REF} {Length: 1267} {TRANSSPLICED} {Pfam: Cytidine and deoxycytidylate deaminase zinc-binding region [PF00383.25, score=68.1]; MafB19-like deaminase [PF14437.8, score=54.4]} {Human: ENSG00000189007, ADAT2, adenosine deaminase, tRNA specific 2, [RH, Score=144, Expect=3e-43]} {Mouse: ENSMUSG00000019808, Adat2, adenosine deaminase, tRNA-specific 2, [RH, Score=142, Expect=1e-42]} {Dmel: FBgn0038491, CG5292, [RH, Score=106, Expect=2e-29]} {Celegans: WBGene00010436, JC8.4, [RH, Score=131, Expect=5e-39]} {Smed: dd_Smed_v6_7968_0_1, dd_Smed_v6_7968_0_1, [RH, Score=102, Expect=9e-28]} {RNA1509_26097} {RNA1310_6653, RNA1509_26097} {RNA1509_26097, RNA815_12714}
20. MligTC455_07600 29 0.6 Mlig455_060595

Neo: -

Age: -

 0.964 - - - - - 0.964 Mlig455_060595 {REF} {Length: 660} {NoTransDecoderORF} {RNA1310_91888}
21. MligTC455_24491 22 0.45 Mlig455_031456

Neo: -

Age: -

 UCKL1 0.964 - - - - - 0.964 Mlig455_031456 {REF} {Length: 2717} {TRANSSPLICED} {Pfam: Phosphoribulokinase / Uridine kinase family [PF00485.20, score=182.9]; Uracil phosphoribosyltransferase [PF14681.8, score=31.9]; AAA domain [PF13238.8, score=22.3]} {Human: ENSG00000198276, UCKL1, uridine-cytidine kinase 1 like 1, [Score=349, Expect=8e-116]} {Mouse: ENSMUSG00000089917, Uckl1, uridine-cytidine kinase 1-like 1, [Score=348, Expect=1e-115]} {Dmel: FBgn0022029, l(2)k01209, lethal (2) k01209, [Score=312, Expect=9e-102]} {Celegans: WBGene00008948, F19B6.1, Uridine kinase, [Score=319, Expect=1e-104]} {Smed: dd_Smed_v6_2901_0_1, dd_Smed_v6_2901_0_1, [Score=332, Expect=4e-110]} {RNA1509_10599, RNA1509_28578} {RNA1310_6004, RNA1509_10599, RNA1509_28578} {RNA1509_10599, RNA1509_28578, RNA815_6729.1}
22. MligTC455_49547 336 7 Mlig455_028613, Mlig455_028636

Neo: -

Age: -

Region-enriched R5: 2.009/0.00823

 NR1D2 0.964 - - - - - 0.964

Mlig455_028613 {REF} {Length: 3434} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=49.3]; Zinc finger, C2H2 type [PF00096.28, score=22.5]} {Human: ENSG00000174738, NR1D2, nuclear receptor subfamily 1 group D member 2, [Score=65.5, Expect=2e-10]; ENSG00000148200, NR6A1, nuclear receptor subfamily 6 group A member 1, [Score=64.7, Expect=4e-11]; ENSG00000143257, NR1I3, nuclear receptor subfamily 1 group I member 3, [Score=64.3, Expect=2e-10]} {Mouse: ENSMUSG00000063972, Nr6a1, nuclear receptor subfamily 6, group A, member 1, [Score=66.6, Expect=7e-12]; ENSMUSG00000021779, Thrb, thyroid hormone receptor beta, [Score=63.9, Expect=3e-10]} {Dmel: FBgn0015240, Hr96, Hormone receptor-like in 96, [Score=63.2, Expect=5e-10]} {Celegans: WBGene00003607, nhr-8, Nuclear hormone receptor family member nhr-8, [Score=76.3, Expect=3e-14]} {Smed: dd_Smed_v6_14067_0_2, dd_Smed_v6_14067_0_2, [Score=75.5, Expect=5e-14]} {RNA1509_56197} {RNA1310_45687.1} {RNA815_27369.1}

Mlig455_028636 {REF} {Length: 3603} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=48.7]; Zinc finger, C2H2 type [PF00096.28, score=22.3]} {Human: ENSG00000174738, NR1D2, nuclear receptor subfamily 1 group D member 2, [Score=68.6, Expect=2e-11]; ENSG00000132170, PPARG, peroxisome proliferator activated receptor gamma, [Score=67.4, Expect=9e-12]} {Mouse: ENSMUSG00000063972, Nr6a1, nuclear receptor subfamily 6, group A, member 1, [Score=67.4, Expect=3e-11]; ENSMUSG00000000440, Pparg, peroxisome proliferator activated receptor gamma, [Score=66.2, Expect=9e-12]; ENSMUSG00000020889, Nr1d1, nuclear receptor subfamily 1, group D, member 1, [Score=64.7, Expect=3e-10]; ENSMUSG00000021779, Thrb, thyroid hormone receptor beta, [Score=64.7, Expect=2e-10]; ENSMUSG00000036192, Rorb, RAR-related orphan receptor beta, [Score=64.3, Expect=3e-10]; ENSMUSG00000032238, Rora, RAR-related orphan receptor alpha, [Score=64.3, Expect=3e-10]} {Dmel: FBgn0031257, CG4133, [RH, Score=68.6, Expect=1e-11]} {Celegans: WBGene00003607, nhr-8, Nuclear hormone receptor family member nhr-8, [Score=74.7, Expect=9e-14]} {Smed: dd_Smed_v6_14067_0_2, dd_Smed_v6_14067_0_2, [Score=73.9, Expect=2e-13]} {RNA1509_36556} {RNA1310_20988} {RNA815_9740}
23. MligTC455_38019 32 0.66 Mlig455_052061

Neo: -

Age: -

 0.963 - - - - - 0.963 Mlig455_052061 {REF} {Length: 1614} {NoTransDecoderORF} {RNA1509_22316} {RNA1310_86084} {RNA815_47119}
24. MligTC455_41081 56 1.17 Mlig455_064084

Neo: Int S/G2/M

Age: Up-Down-Down

 KIF20A 0.963 - - - - - 0.963 Mlig455_064084 {REF} {Length: 7806} {Pfam: Kinesin motor domain [PF00225.25, score=289.0]; Microtubule binding [PF16796.7, score=46.0]} {Human: ENSG00000112984, KIF20A, kinesin family member 20A, [RH, Score=308, Expect=2e-87]; ENSG00000138182, KIF20B, kinesin family member 20B, [RH, Score=304, Expect=1e-82]} {Mouse: ENSMUSG00000024795, Kif20b, kinesin family member 20B, [RH, Score=307, Expect=5e-84]; ENSMUSG00000003779, Kif20a, kinesin family member 20A, [RH, Score=306, Expect=1e-86]} {Dmel: FBgn0011692, pav, pavarotti, [Score=201, Expect=2e-52]} {Celegans: WBGene00006974, zen-4, Kinesin-like protein, [Score=193, Expect=2e-50]} {Smed: dd_Smed_v6_13972_0_2, dd_Smed_v6_13972_0_2, [RH, Score=281, Expect=7e-78]} {RNA1509_17742} {RNA1310_1227.1} {RNA815_3788}
25. MligTC455_05244 27 0.57 Mlig455_003215

Neo: -

Age: -

 0.962 - - - - - 0.962 Mlig455_003215 {REF} {Length: 277} {NoTransDecoderORF} {RNA1509_29560} {RNA1310_21431} {RNA815_27412}
26. MligTC455_47486 177 3.68 Mlig455_002155

Neo: -

Age: -

 0.961 - - - - - 0.961 Mlig455_002155 {REF} {Length: 4784} {TRANSSPLICED} {RNA1509_8421} {RNA1310_19895} {RNA815_8122.1}
27. MligTC455_48028 185 3.85 Mlig455_007274

Neo: -

Age: Down-Up-Down

Regeneration-upregulated BL: 4.108

Regeneration-enriched BL: 4.108

 SPSB4 0.961 - - - - - 0.961 Mlig455_007274 {REF} {Length: 2130} {Human: ENSG00000175093, SPSB4, splA/ryanodine receptor domain and SOCS box containing 4, [Score=104, Expect=7e-27]; ENSG00000171621, SPSB1, splA/ryanodine receptor domain and SOCS box containing 1, [Score=103, Expect=4e-27]} {Mouse: ENSMUSG00000039911, Spsb1, splA/ryanodine receptor domain and SOCS box containing 1, [Score=103, Expect=2e-27]; ENSMUSG00000046997, Spsb4, splA/ryanodine receptor domain and SOCS box containing 4, [Score=103, Expect=1e-26]} {Dmel: FBgn0026238, gus, gustavus, [Score=107, Expect=5e-28]} {Celegans: WBGene00021597, spsb-1, SPSB (SPry and Socs Box) family, [Score=94.7, Expect=5e-23]} {Smed: dd_Smed_v6_9905_0_1, dd_Smed_v6_9905_0_1, [Score=77.0, Expect=8e-17]} {RNA1509_16638} {RNA1310_11847} {RNA815_5105}
28. MligTC455_00339 15 0.32 Mlig455_018956

Neo: -

Age: -

 0.96 - - - - 0.960 - Mlig455_018956 {REF} {Length: 266} {NoTransDecoderORF} {RNA1310_92772}
29. MligTC455_08312 9 0.18 Mlig455_066070

Neo: -

Age: -

 BCL11A 0.96 - - - - - 0.960 Mlig455_066070 {REF} {Length: 1033} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=47.3]; Zinc-finger double domain [PF13465.8, score=32.8]; C2H2-type zinc finger [PF13894.8, score=31.7]; C2H2-type zinc-finger domain [PF13909.8, score=24.4]} {Human: ENSG00000119866, BCL11A, B cell CLL/lymphoma 11A, [Score=127, Expect=8e-33]; ENSG00000127152, BCL11B, B cell CLL/lymphoma 11B, [Score=125, Expect=3e-32]} {Mouse: ENSMUSG00000000861, Bcl11a, B cell CLL/lymphoma 11A (zinc finger protein), [Score=126, Expect=6e-33]; ENSMUSG00000048251, Bcl11b, B cell leukemia/lymphoma 11B, [Score=125, Expect=2e-32]} {Dmel: FBgn0029939, CG9650, [Score=138, Expect=5e-37]} {Celegans: WBGene00017430, bcl-11, Mammalian BCL (B cell lymphoma) gene homologs, [Score=117, Expect=4e-30]} {Smed: dd_Smed_v6_10320_0_1, dd_Smed_v6_10320_0_1, [Score=136, Expect=1e-38]}
30. MligTC455_17276 191 3.98 Mlig455_014333

Neo: -

Age: -

Region-enriched R5: 2.646/0.02196

 PTPRS 0.96 - - - - - 0.960 Mlig455_014333 {REF} {Length: 2903} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=351.6]} {Human: ENSG00000105426, PTPRS, protein tyrosine phosphatase, receptor type S, [Score=291, Expect=2e-83]; ENSG00000173482, PTPRM, protein tyrosine phosphatase, receptor type M, [Score=280, Expect=9e-80]; ENSG00000142949, PTPRF, protein tyrosine phosphatase, receptor type F, [Score=278, Expect=1e-78]; ENSG00000273993, PTPRK, protein tyrosine phosphatase, receptor type K, [Score=277, Expect=9e-79]; ENSG00000152894, PTPRK, protein tyrosine phosphatase, receptor type K, [Score=277, Expect=9e-79]} {Mouse: ENSMUSG00000013236, Ptprs, protein tyrosine phosphatase, receptor type, S, [Score=285, Expect=2e-81]; ENSMUSG00000028399, Ptprd, protein tyrosine phosphatase, receptor type, D, [Score=281, Expect=5e-80]; ENSMUSG00000033278, Ptprm, protein tyrosine phosphatase, receptor type, M, [Score=281, Expect=4e-80]; ENSMUSG00000033295, Ptprf, protein tyrosine phosphatase, receptor type, F, [Score=277, Expect=7e-79]; ENSMUSG00000053141, Ptprt, protein tyrosine phosphatase, receptor type, T, [Score=272, Expect=3e-77]; ENSMUSG00000019889, Ptprk, protein tyrosine phosphatase, receptor type, K, [Score=271, Expect=7e-77]} {Dmel: FBgn0267486, Ptp36E, Protein tyrosine phosphatase 36E, [Score=329, Expect=4e-102]} {Celegans: WBGene00011755, T13H5.1, Protein-tyrosine-phosphatase, [RH, Score=299, Expect=9e-91]} {Smed: dd_Smed_v6_13723_0_1, dd_Smed_v6_13723_0_1, [RH, Score=276, Expect=6e-82]} {RNA1509_14248} {RNA1310_6957.1} {RNA815_16025}
31. MligTC455_52508 76 1.57 Mlig455_004455, Mlig455_021189, Mlig455_021236, Mlig455_057892

Neo: -

Age: -

 CNBD2 0.959 - - - - 0.959 -

Mlig455_004455 {REF} {Length: 969} {RNA1310_44058} {RNA815_33235}

Mlig455_021189 {REF} {Length: 2436} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=59.8]} {Human: ENSG00000149646, CNBD2, cyclic nucleotide binding domain containing 2, [Score=67.0, Expect=2e-11]} {Mouse: ENSMUSG00000038085, Cnbd2, cyclic nucleotide binding domain containing 2, [Score=64.3, Expect=1e-10]} {Dmel: FBgn0022382, Pka-R2, Protein kinase, cAMP-dependent, regulatory subunit type 2, [Score=55.5, Expect=4e-08]} {Celegans: WBGene00002190, kin-2, cAMP-dependent protein kinase regulatory subunit, [Score=57.0, Expect=9e-09]} {Smed: dd_Smed_v6_19613_0_1, dd_Smed_v6_19613_0_1, [Score=160, Expect=9e-45]} {RNA1310_44058} {RNA815_33235}

Mlig455_021236 {REF} {Length: 3194} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=75.3]} {Human: ENSG00000149646, CNBD2, cyclic nucleotide binding domain containing 2, [Score=66.6, Expect=4e-11]} {Mouse: ENSMUSG00000038085, Cnbd2, cyclic nucleotide binding domain containing 2, [Score=63.5, Expect=2e-10]} {Dmel: FBgn0259243, Pka-R1, Protein kinase, cAMP-dependent, regulatory subunit type 1, [Score=61.2, Expect=4e-10]} {Celegans: WBGene00002190, kin-2, cAMP-dependent protein kinase regulatory subunit, [Score=62.0, Expect=2e-10]} {Smed: dd_Smed_v6_19613_0_1, dd_Smed_v6_19613_0_1, [Score=163, Expect=1e-45]} {RNA1310_44058} {RNA815_33235}

Mlig455_057892 {REF} {Length: 1962} {RNA1310_44058} {RNA815_33235}
32. MligTC455_10194 11 0.23 Mlig455_032671

Neo: -

Age: -

 ALKBH3 0.957 - - - - - 0.957 Mlig455_032671 {REF} {Length: 1189} {Pfam: 2OG-Fe(II) oxygenase superfamily [PF13532.8, score=89.0]} {Human: ENSG00000166199, ALKBH3, alkB homolog 3, alpha-ketoglutaratedependent dioxygenase, [Score=100, Expect=1e-23]} {Mouse: ENSMUSG00000040174, Alkbh3, alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase, [Score=103, Expect=6e-25]} {Smed: dd_Smed_v6_7441_0_1, dd_Smed_v6_7441_0_1, [Score=95.5, Expect=3e-22]} {RNA1509_52195} {RNA1310_39725}
33. MligTC455_47950 161 3.36 Mlig455_031570

Neo: -

Age: logFC(26M/2M)=-0.427

 GRID2IP 0.957 - - - - - 0.957 Mlig455_031570 {REF} {Length: 4000} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=39.4]; PDZ domain [PF17820.3, score=31.7]; PDZ domain [PF13180.8, score=22.0]} {Human: ENSG00000215045, GRID2IP, Grid2 interacting protein, [Score=57.0, Expect=1e-07]} {Dmel: FBgn0264598, PsGEF, Protostome-specific GEF, [Score=73.2, Expect=7e-13]} {Smed: dd_Smed_v6_12613_0_1, dd_Smed_v6_12613_0_1, [Score=55.1, Expect=1e-07]} {RNA1509_38079} {RNA1310_16413} {RNA815_31333}
34. MligTC455_06814 49 1.02 Mlig455_046899

Neo: -

Age: -

 0.956 - - - - - 0.956 Mlig455_046899 {REF} {Length: 337}
35. MligTC455_11056 182 3.79 Mlig455_021176

Neo: -

Age: Down-Up-Down

 0.956 - - 0.956 - - - Mlig455_021176 {REF} {Length: 2022} {TRANSSPLICED} {RNA1509_23663} {RNA1310_23883, RNA1509_23663} {RNA1509_23663, RNA815_16092}
36. MligTC455_19124 68 1.41 Mlig455_056714

Neo: -

Age: Up-Down-Up

 NPFFR1 0.956 - - - - - 0.956 Mlig455_056714 {REF} {Length: 3702} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=113.2]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=23.3]} {Human: ENSG00000148734, NPFFR1, neuropeptide FF receptor 1, [Score=90.1, Expect=1e-18]; ENSG00000137252, HCRTR2, hypocretin receptor 2, [Score=87.8, Expect=6e-18]} {Mouse: ENSMUSG00000038071, Npy6r, neuropeptide Y receptor Y6, [Score=105, Expect=2e-24]} {Dmel: FBgn0037408, NPFR, Neuropeptide F receptor, [Score=131, Expect=7e-33]} {Celegans: WBGene00003808, npr-2, NeuroPeptide Receptor family, [Score=100, Expect=1e-22]} {Smed: dd_Smed_v6_26109_0_1, dd_Smed_v6_26109_0_1, [RH, Score=210, Expect=4e-61]} {RNA1509_34547} {RNA1310_9062, RNA1509_34547} {RNA1509_34547, RNA815_6805}
37. MligTC455_47490 338 7.05 Mlig455_007581

Neo: Irradiation

Age: -

Region-specific R5: 2.714

Region-enriched R5: 2.111/0.00000

 TUT7 0.956 - - - 0.956 - - Mlig455_007581 {REF} {Length: 3583} {TRANSSPLICED} {Pfam: TUTase nucleotidyltransferase domain [PF19088.2, score=36.1]} {Human: ENSG00000083223, TUT7, terminal uridylyl transferase 7, [Score=53.5, Expect=2e-06]} {RNA1509_22764, RNA1509_41081, RNA1509_43617, RNA1509_43646} {RNA1310_6443.1, RNA1509_41081, RNA1509_43617, RNA1509_43646} {RNA1509_41081, RNA1509_43617, RNA1509_43646, RNA815_24098}
38. MligTC455_18625 24 0.49 Mlig455_028686

Neo: -

Age: -

 0.955 - - - - 0.955 - Mlig455_028686 {REF} {Length: 1422} {NoTransDecoderORF} {RNA1509_34797} {RNA1310_47986} {RNA815_46640}
39. MligTC455_28586 32 0.66 Mlig455_032084

Neo: -

Age: Up-Down-Down

 0.955 - - - - - 0.955 Mlig455_032084 {REF} {Length: 7595} {RNA1509_42521, RNA1509_44223, RNA1509_46209} {RNA1310_31499, RNA1509_42521, RNA1509_46209} {RNA1509_42521, RNA1509_46209, RNA815_19070}
40. MligTC455_29365 117 2.43 Mlig455_056795

Neo: -

Age: Up-Down-Down

 0.955 - - - - - 0.955 Mlig455_056795 {REF} {Length: 1826} {RNA1509_16318} {RNA1310_36885.1} {RNA815_17277}
41. MligTC455_29577 55 1.15 Mlig455_034332, Mlig455_043861

Neo: -

Age: -

Region-enriched R2: 5.585/0.04648

 0.955 - - - - - 0.955

Mlig455_034332 {REF} {Length: 462} {NoTransDecoderORF} {RNA1509_44226} {RNA1310_127890} {RNA815_19744}

Mlig455_043861 {REF} {Length: 1191} {RNA1509_44226} {RNA1310_46029} {RNA815_931}
42. MligTC455_31548 14 0.29 Mlig455_049182

Neo: -

Age: Down-Down-Up

 0.954 - - - - 0.954 - Mlig455_049182 {REF} {Length: 5859} {Pfam: Putative DNA-binding domain [PF04326.16, score=32.7]} {RNA1509_47755} {RNA1310_4459.1, RNA1509_47755} {RNA1509_47755, RNA815_3355.1}
43. MligTC455_49626 298 6.21 Mlig455_048453, Mlig455_062723

Neo: -

Age: -

 MRPL37 0.954 - - - - - 0.954

Mlig455_048453 {REF} {Length: 2492} {TRANSSPLICED} {Pfam: Mitochondrial 28S ribosomal protein S30 (PDCD9) [PF07147.14, score=44.0]} {Human: ENSG00000116221, MRPL37, mitochondrial ribosomal protein L37, [RH, Score=116, Expect=6e-28]} {Mouse: ENSMUSG00000028622, Mrpl37, mitochondrial ribosomal protein L37, [RH, Score=103, Expect=1e-23]} {Dmel: FBgn0261380, mRpL37, mitochondrial ribosomal protein L37, [RH, Score=70.9, Expect=5e-13]} {Smed: dd_Smed_v6_7564_0_1, dd_Smed_v6_7564_0_1, [RH, Score=202, Expect=5e-60]} {RNA1509_9957} {RNA1310_18425} {RNA815_6967}

Mlig455_062723 {REF} {Length: 2856} {TRANSSPLICED} {Pfam: Mitochondrial 28S ribosomal protein S30 (PDCD9) [PF07147.14, score=43.6]} {Human: ENSG00000116221, MRPL37, mitochondrial ribosomal protein L37, [RH, Score=116, Expect=5e-28]} {Mouse: ENSMUSG00000028622, Mrpl37, mitochondrial ribosomal protein L37, [RH, Score=104, Expect=7e-24]} {Dmel: FBgn0261380, mRpL37, mitochondrial ribosomal protein L37, [RH, Score=70.5, Expect=7e-13]} {Smed: dd_Smed_v6_7564_0_1, dd_Smed_v6_7564_0_1, [RH, Score=201, Expect=1e-59]} {RNA1509_50196, RNA1509_50379, RNA1509_9957} {RNA1310_18425, RNA1509_50196, RNA1509_50379, RNA1509_9957} {RNA1509_50196, RNA1509_50379, RNA1509_9957, RNA815_6967}
44. MligTC455_00715 24 0.51 Mlig455_060639

Neo: -

Age: -

 0.953 - - - - - 0.953 Mlig455_060639 {REF} {Length: 802} {NoTransDecoderORF} {RNA1509_54585} {RNA1310_91888} {RNA815_7856.1}
45. MligTC455_09509 46 0.95 Mlig455_042043

Neo: -

Age: -

 0.952 - - - - - 0.952 Mlig455_042043 {REF} {Length: 1543} {Pfam: SICA C-terminal inner membrane domain [PF12879.9, score=63.2]} {RNA1509_50446} {RNA1310_8738.1} {RNA815_21682.1}
46. MligTC455_27846 65 1.35 Mlig455_062268

Neo: -

Age: -

 0.952 - - - - - 0.952 Mlig455_062268 {REF} {Length: 6610} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=128.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=113.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=76.6]; Integrase zinc binding domain [PF17921.3, score=71.0]; Integrase core domain [PF00665.28, score=47.5]; Aspartyl protease [PF13650.8, score=38.9]; gag-polyprotein putative aspartyl protease [PF13975.8, score=34.5]; Retroviral aspartyl protease [PF00077.22, score=26.8]; Aspartyl protease [PF09668.12, score=22.8]; Putative peptidase (DUF1758) [PF05585.14, score=21.8]; Retroviral aspartyl protease [PF08284.13, score=18.9]; DDE superfamily endonuclease [PF13358.8, score=18.6]} {Smed: dd_Smed_v6_1574_6_41, dd_Smed_v6_1574_6_41, [Score=335, Expect=6e-100]} {RNA1509_20493} {RNA1310_131.1} {RNA815_52.1}
47. MligTC455_51211 648 13.49 Mlig455_024628

Neo: -

Age: -

 PDCD2L 0.952 - - - 0.952 - - Mlig455_024628 {REF} {Length: 1481} {TRANSSPLICED} {Pfam: Programmed cell death protein 2, C-terminal putative domain [PF04194.15, score=83.7]} {Human: ENSG00000126249, PDCD2L, programmed cell death 2 like, [RH, Score=103, Expect=2e-24]} {Mouse: ENSMUSG00000002635, Pdcd2l, programmed cell death 2-like, [Score=97.1, Expect=4e-22]} {Celegans: WBGene00011116, pdcd-2, Vacuolar ATPase assembly integral membrane protein VMA21 homolog, [Score=70.5, Expect=3e-13]} {RNA1509_50583} {RNA1310_20947} {RNA815_11084.1}
48. MligTC455_12940 24 0.5 Mlig455_019094

Neo: -

Age: logFC(26M/2M)=-1.094

 ZIC1 0.951 - - - - - 0.951 Mlig455_019094 {REF} {Length: 1831} {Pfam: Zic proteins zinc finger domain [PF18366.3, score=76.3]; Zinc-finger double domain [PF13465.8, score=29.6]; Zinc finger, C2H2 type [PF00096.28, score=23.2]} {Human: ENSG00000152977, ZIC1, Zic family member 1, [Score=167, Expect=1e-47]; ENSG00000043355, ZIC2, Zic family member 2, [Score=166, Expect=3e-46]; ENSG00000156925, ZIC3, Zic family member 3, [Score=163, Expect=8e-46]} {Mouse: ENSMUSG00000036972, Zic4, zinc finger protein of the cerebellum 4, [Score=168, Expect=6e-49]; ENSMUSG00000032368, Zic1, zinc finger protein of the cerebellum 1, [Score=167, Expect=8e-48]; ENSMUSG00000061524, Zic2, zinc finger protein of the cerebellum 2, [Score=166, Expect=2e-46]; ENSMUSG00000067860, Zic3, zinc finger protein of the cerebellum 3, [Score=164, Expect=2e-46]} {Dmel: FBgn0003002, opa, odd paired, [Score=164, Expect=2e-45]} {Celegans: WBGene00004335, ref-2, REgulator of Fusion, [Score=100, Expect=5e-24]} {Smed: dd_Smed_v6_15531_0_1, dd_Smed_v6_15531_0_1, [Score=169, Expect=2e-48]} {RNA1509_12223} {RNA1310_49525, RNA1509_12223} {RNA1509_12223, RNA815_49740}
49. MligTC455_25213 78 1.63 Mlig455_025712, Mlig455_025734, Mlig455_064431

Neo: -

Age: -

 0.951 - - - - - 0.951

Mlig455_025712 {REF} {Length: 840} {NoTransDecoderORF} {RNA1509_49205} {RNA1310_16163} {RNA815_51467}

Mlig455_025734 {REF} {Length: 1579} {NoTransDecoderORF} {RNA1509_49205} {RNA1310_16163, RNA1509_49205} {RNA1509_49205, RNA815_51467}

Mlig455_064431 {REF} {Length: 946} {NoTransDecoderORF} {RNA1509_49205} {RNA1310_16163} {RNA815_51467}
50. MligTC455_46129 328 6.83 Mlig455_058113

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_058113 {REF} {Length: 2107} {TRANSSPLICED} {RNA1509_34188} {RNA1310_30874} {RNA815_17123}
51. MligTC455_46970 116 2.42 Mlig455_023542, Mlig455_023648

Neo: -

Age: Up-Down-Down

 0.951 - - - - - 0.951

Mlig455_023542 {REF} {Length: 204} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_51411} {RNA1310_6238} {RNA815_21168}

Mlig455_023648 {REF} {Length: 217} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_51411} {RNA1310_6238} {RNA815_21168}
52. MligTC455_49481 2896 60.33 Mlig455_061474

Neo: -

Age: -

Regeneration-upregulated BL: 1.088

Regeneration-enriched BL: 1.088

 RBM39 0.951 - - - - - 0.951 Mlig455_061474 {REF} {Length: 2417} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=137.4]; linker between RRM2 and RRM3 domains in RBM39 protein [PF15519.8, score=59.8]} {Human: ENSG00000131051, RBM39, RNA binding motif protein 39, [RH, Score=365, Expect=2e-119]} {Mouse: ENSMUSG00000027620, Rbm39, RNA binding motif protein 39, [RH, Score=365, Expect=1e-119]} {Dmel: FBgn0031883, Caper, [Score=342, Expect=6e-110]} {Celegans: WBGene00021921, Y55F3AM.3, [RH, Score=259, Expect=2e-78]} {Smed: dd_Smed_v6_1932_0_1, dd_Smed_v6_1932_0_1, [RH, Score=273, Expect=2e-85]} {RNA1509_9704} {RNA1310_3436.2, RNA1509_9704} {RNA1509_9704, RNA815_1081.1}
53. MligTC455_09724 48 1.01 Mlig455_009261

Neo: -

Age: -

 0.95 - - - - - 0.950 Mlig455_009261 {REF} {Length: 1012} {NoTransDecoderORF}
54. MligTC455_10360 76 1.58 Mlig455_005573

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.671

 0.95 - - - - 0.950 - Mlig455_005573 {REF} {Length: 2297} {TRANSSPLICED} {RNA1310_35838.2} {RNA815_17439}
55. MligTC455_54026 99 2.07 Mlig455_025843, Mlig455_025903

Neo: -

Age: -

 0.95 - - - - - 0.950

Mlig455_025843 {REF} {Length: 2505} {TRANSSPLICED} {Pfam: Hsp20/alpha crystallin family [PF00011.23, score=91.5]; HSP20-like domain found in ArsA [PF17886.3, score=30.3]} {Dmel: FBgn0001225, Hsp26, Heat shock protein 26, [RH, Score=57.8, Expect=8e-10]} {Celegans: WBGene00008592, F08H9.4, [RH, Score=60.5, Expect=2e-11]} {Smed: dd_Smed_v6_1039_0_1, dd_Smed_v6_1039_0_1, [RH, Score=101, Expect=2e-25]} {RNA1509_26837} {RNA1310_48105} {RNA815_21766}

Mlig455_025903 {REF} {Length: 2459} {TRANSSPLICED} {Pfam: Hsp20/alpha crystallin family [PF00011.23, score=91.5]; HSP20-like domain found in ArsA [PF17886.3, score=30.3]} {Dmel: FBgn0001225, Hsp26, Heat shock protein 26, [RH, Score=57.8, Expect=8e-10]} {Celegans: WBGene00008592, F08H9.4, [RH, Score=60.8, Expect=2e-11]} {Smed: dd_Smed_v6_1039_0_1, dd_Smed_v6_1039_0_1, [RH, Score=101, Expect=2e-25]} {RNA1509_33990} {RNA1310_42388.1} {RNA815_21766}

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