Data search


search
Exact
Search

Results for MligTC455_17419

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_17419 795 16.56 Mlig455_032917

Neo: -

Age: logFC(26M/2M)=0.606

Mlig455_032917 {REF} {Length: 1667} {TRANSSPLICED} {Pfam: Apoptosis regulator proteins, Bcl-2 family [PF00452.21, score=26.3]} {RNA1509_22828, RNA1509_38661} {RNA1310_37599.1, RNA1509_22828, RNA1509_38661} {RNA1509_22828, RNA1509_38661, RNA815_17225}

Cumulative graph for MligTC455_17419

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.361 4.312 0.71570 1.00000
RegionR2 -1.085 4.312 0.03245 0.20516
RegionR3 0.651 4.312 0.07742 0.49255
RegionR4 1.135 4.312 0.00995 0.06087
RegionR5 0.88 4.312 0.00977 0.05673
RegionR6 0.582 4.312 0.12356 0.64054
RegionR7 -0.514 4.312 0.30895 0.94306
RegionR8 -1.287 4.312 0.05525 0.45918

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.088 4.312 0.50239 1.00000
RegenerationR2 -0.311 4.312 0.50925 0.87501
RegenerationR3 -0.697 4.312 0.12235 0.54248
RegenerationR4 -0.77 4.312 0.09908 0.48841
RegenerationR5 -0.354 4.312 0.40763 0.80416
RegenerationR6 -0.174 4.312 0.69965 0.92413
RegenerationBL 0.168 4.312 0.75678 1.00000
RegenerationTP 0.583 4.312 0.33725 0.78133


Genes with expression patterns similar to MligTC455_17419

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_17419 795 16.56 Mlig455_032917

Neo: -

Age: logFC(26M/2M)=0.606

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_032917 {REF} {Length: 1667} {TRANSSPLICED} {Pfam: Apoptosis regulator proteins, Bcl-2 family [PF00452.21, score=26.3]} {RNA1509_22828, RNA1509_38661} {RNA1310_37599.1, RNA1509_22828, RNA1509_38661} {RNA1509_22828, RNA1509_38661, RNA815_17225}
2. MligTC455_40250 1573 32.77 Mlig455_002988, Mlig455_003004, Mlig455_055610

Neo: Int S/G2/M

Age: Down-Up-Up

1.703 - - - 0.955 0.748 -

Mlig455_002988 {REF} {Length: 1297} {TRANSSPLICED} {Pfam: Ribosomal RNA-processing protein 7 (RRP7) C-terminal domain [PF12923.9, score=27.0]} {RNA1509_10372, RNA1509_32504} {RNA1310_16240.1, RNA1509_10372, RNA1509_32504} {RNA1509_10372, RNA1509_32504, RNA815_7817}

Mlig455_003004 {REF} {Length: 1292} {TRANSSPLICED} {Pfam: Ribosomal RNA-processing protein 7 (RRP7) C-terminal domain [PF12923.9, score=27.0]} {RNA1509_10372, RNA1509_31288} {RNA1310_16240.1, RNA1509_31288} {RNA1509_31288, RNA815_7817}

Mlig455_055610 {REF} {Length: 1356} {TRANSSPLICED} {Pfam: Ribosomal RNA-processing protein 7 (RRP7) C-terminal domain [PF12923.9, score=27.0]} {RNA1509_10372} {RNA1310_16240.1} {RNA815_7817}
3. MligTC455_34495 1552 32.34 Mlig455_027246

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.354

Region-enriched R4: 2.230/0.00386
Region-enriched R5: 1.799/0.00310

HSBP1 1.7 0.739 - - 0.961 - - Mlig455_027246 {REF} {Length: 815} {Pfam: Heat shock factor binding protein 1 [PF06825.14, score=85.1]; C-terminal leucine zipper domain of cyclic nucleotide-gated channels [PF16526.7, score=25.4]; Uncharacterized conserved protein [PF10241.11, score=19.4]} {Human: ENSG00000230989, HSBP1, heat shock factor binding protein 1, [RH, Score=81.6, Expect=8e-22]} {Mouse: ENSMUSG00000031839, Hsbp1, heat shock factor binding protein 1, [RH, Score=75.9, Expect=1e-19]} {Dmel: FBgn0032429, CG5446, [RH, Score=78.6, Expect=9e-21]} {Celegans: WBGene00002002, hsb-1, Heat Shock factor Binding protein, [RH, Score=58.5, Expect=5e-13]} {Smed: dd_Smed_v6_15016_0_1, dd_Smed_v6_15016_0_1, [Score=78.6, Expect=4e-21]} {RNA1509_10103} {RNA1310_39673} {RNA815_17924.1}
4. MligTC455_22252 465 9.7 Mlig455_023950

Neo: Int S/G2/M

Age: -

Regeneration-upregulated R6: 2.325

Regeneration-enriched R6: 2.325

UTP18 0.966 - - - - 0.966 - Mlig455_023950 {REF} {Length: 2924} {TRANSSPLICED} {Pfam: Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=41.6]; WD domain, G-beta repeat [PF00400.34, score=33.2]} {Human: ENSG00000011260, UTP18, UTP18, small subunit processome component, [RH, Score=191, Expect=1e-53]} {Mouse: ENSMUSG00000054079, Utp18, UTP18 small subunit processome component, [RH, Score=189, Expect=6e-53]} {Dmel: FBgn0262560, wcd, wicked, [RH, Score=157, Expect=3e-42]} {Celegans: WBGene00015104, B0280.9, U3 small nucleolar RNA-associated protein 18 homolog, [Score=99.4, Expect=3e-22]} {Smed: dd_Smed_v6_3855_0_1, dd_Smed_v6_3855_0_1, [RH, Score=105, Expect=1e-24]} {RNA1509_17950, RNA1509_23677, RNA1509_35462, RNA1509_52248} {RNA1310_20176.1, RNA1509_17950, RNA1509_23677, RNA1509_35462, RNA1509_52248} {RNA1509_17950, RNA1509_23677, RNA1509_35462, RNA1509_52248, RNA815_4217.1}
5. MligTC455_51681 762 15.87 Mlig455_009904

Neo: -

Age: -

Regeneration-upregulated BL: 1.809

Regeneration-enriched BL: 1.809

YBX3 0.958 - - - - 0.958 - Mlig455_009904 {REF} {Length: 3925} {Pfam: 'Cold-shock' DNA-binding domain [PF00313.24, score=92.6]} {Human: ENSG00000060138, YBX3, Y-box binding protein 3, [RH, Score=161, Expect=2e-47]; ENSG00000065978, YBX1, Y-box binding protein 1, [RH, Score=157, Expect=2e-45]; ENSG00000006047, YBX2, Y-box binding protein 2, [RH, Score=153, Expect=2e-43]} {Mouse: ENSMUSG00000030189, Ybx3, Y box protein 3, [RH, Score=162, Expect=8e-48]; ENSMUSG00000028639, Ybx1, Y box protein 1, [RH, Score=157, Expect=1e-45]} {Dmel: FBgn0022959, yps, ypsilon schachtel, [RH, Score=154, Expect=2e-44]} {Celegans: WBGene00000472, cey-1, C. Elegans Y-box, [RH, Score=146, Expect=4e-43]} {Smed: dd_Smed_v6_25570_0_1, dd_Smed_v6_25570_0_1, [Score=162, Expect=1e-47]} {RNA1509_14234, RNA1509_43002} {RNA1310_16756, RNA1509_14234} {RNA1509_14234, RNA815_19171.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA