Data search
Results for MligTC455_40250
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_40250 | 1573 | 32.77 | Mlig455_002988, Mlig455_003004, Mlig455_055610 | Neo: Int S/G2/M Age: Down-Up-Up |
Mlig455_002988 {REF} {Length: 1297} {TRANSSPLICED} {Pfam: Ribosomal RNA-processing protein 7 (RRP7) C-terminal domain [PF12923.9, score=27.0]} {RNA1509_10372, RNA1509_32504} {RNA1310_16240.1, RNA1509_10372, RNA1509_32504} {RNA1509_10372, RNA1509_32504, RNA815_7817} Mlig455_003004 {REF} {Length: 1292} {TRANSSPLICED} {Pfam: Ribosomal RNA-processing protein 7 (RRP7) C-terminal domain [PF12923.9, score=27.0]} {RNA1509_10372, RNA1509_31288} {RNA1310_16240.1, RNA1509_31288} {RNA1509_31288, RNA815_7817} Mlig455_055610 {REF} {Length: 1356} {TRANSSPLICED} {Pfam: Ribosomal RNA-processing protein 7 (RRP7) C-terminal domain [PF12923.9, score=27.0]} {RNA1509_10372} {RNA1310_16240.1} {RNA815_7817} |
Cumulative graph for MligTC455_40250
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.533 | 5.285 | 0.05621 | 0.54925 | |
| RegionR2 | 0.726 | 5.285 | 0.04456 | 0.24826 | |
| RegionR3 | 0.613 | 5.285 | 0.03032 | 0.29976 | |
| RegionR4 | 0.188 | 5.285 | 0.56897 | 0.88738 | |
| RegionR5 | 0.519 | 5.285 | 0.04383 | 0.17040 | |
| RegionR6 | 0.582 | 5.285 | 0.04037 | 0.37739 | |
| RegionR7 | 0.665 | 5.285 | 0.03912 | 0.37936 | |
| RegionR8 | -1.76 | 5.285 | 0.00108 | 0.04940 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.233 | 5.285 | 0.88171 | 1.00000 | |
| RegenerationR2 | -0.627 | 5.285 | 0.04925 | 0.36653 | |
| RegenerationR3 | -0.086 | 5.285 | 0.79883 | 0.98230 | |
| RegenerationR4 | 0.28 | 5.285 | 0.40618 | 0.81777 | |
| RegenerationR5 | 0.019 | 5.285 | 0.94923 | 1.00000 | |
| RegenerationR6 | 0.405 | 5.285 | 0.22047 | 0.56451 | |
| RegenerationBL | 0.45 | 5.285 | 0.28540 | 0.64722 | |
| RegenerationTP | 1.055 | 5.285 | 0.01880 | 0.23486 |
Genes with expression patterns similar to MligTC455_40250
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_40250 | 1573 | 32.77 | Mlig455_002988, Mlig455_003004, Mlig455_055610 | Neo: Int S/G2/M Age: Down-Up-Up |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_002988 {REF} {Length: 1297} {TRANSSPLICED} {Pfam: Ribosomal RNA-processing protein 7 (RRP7) C-terminal domain [PF12923.9, score=27.0]} {RNA1509_10372, RNA1509_32504} {RNA1310_16240.1, RNA1509_10372, RNA1509_32504} {RNA1509_10372, RNA1509_32504, RNA815_7817} Mlig455_003004 {REF} {Length: 1292} {TRANSSPLICED} {Pfam: Ribosomal RNA-processing protein 7 (RRP7) C-terminal domain [PF12923.9, score=27.0]} {RNA1509_10372, RNA1509_31288} {RNA1310_16240.1, RNA1509_31288} {RNA1509_31288, RNA815_7817} Mlig455_055610 {REF} {Length: 1356} {TRANSSPLICED} {Pfam: Ribosomal RNA-processing protein 7 (RRP7) C-terminal domain [PF12923.9, score=27.0]} {RNA1509_10372} {RNA1310_16240.1} {RNA815_7817} |
|
| 2. | MligTC455_17419 | 795 | 16.56 | Mlig455_032917 | Neo: - Age: logFC(26M/2M)=0.606 |
1.703 | - | - | - | 0.955 | 0.748 | - | Mlig455_032917 {REF} {Length: 1667} {TRANSSPLICED} {Pfam: Apoptosis regulator proteins, Bcl-2 family [PF00452.21, score=26.3]} {RNA1509_22828, RNA1509_38661} {RNA1310_37599.1, RNA1509_22828, RNA1509_38661} {RNA1509_22828, RNA1509_38661, RNA815_17225} | |
| 3. | MligTC455_47208 | 1083 | 22.56 | Mlig455_034771 | Neo: Int S/G2/M Age: - Regeneration-upregulated BL: 1.670 Regeneration-enriched BL: 1.670 |
E2F4 | 1.668 | - | - | - | - | 0.956 | 0.712 | Mlig455_034771 {REF} {Length: 2224} {TRANSSPLICED} {Pfam: E2F/DP family winged-helix DNA-binding domain [PF02319.22, score=89.0]; E2F transcription factor CC-MB domain [PF16421.7, score=79.6]} {Human: ENSG00000205250, E2F4, E2F transcription factor 4, [RH, Score=207, Expect=2e-62]} {Mouse: ENSMUSG00000014859, E2f4, E2F transcription factor 4, [RH, Score=206, Expect=4e-62]} {Dmel: FBgn0011766, E2f1, E2F transcription factor 1, [RH, Score=107, Expect=5e-25]} {Celegans: WBGene00001161, efl-1, E2F-like (Mammalian transcription factor); EFL-1, [RH, Score=124, Expect=2e-32]} {Smed: dd_Smed_v6_3130_0_1, dd_Smed_v6_3130_0_1, [RH, Score=110, Expect=3e-28]} {RNA1509_11778, RNA1509_30431, RNA1509_39358} {RNA1310_22021, RNA1509_11778, RNA1509_30431, RNA1509_39358} {RNA1509_11778, RNA1509_30431, RNA1509_39358, RNA815_22661} |
| 4. | MligTC455_34495 | 1552 | 32.34 | Mlig455_027246 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.354 Region-enriched R4: 2.230/0.00386 |
HSBP1 | 0.987 | - | - | - | 0.987 | - | - | Mlig455_027246 {REF} {Length: 815} {Pfam: Heat shock factor binding protein 1 [PF06825.14, score=85.1]; C-terminal leucine zipper domain of cyclic nucleotide-gated channels [PF16526.7, score=25.4]; Uncharacterized conserved protein [PF10241.11, score=19.4]} {Human: ENSG00000230989, HSBP1, heat shock factor binding protein 1, [RH, Score=81.6, Expect=8e-22]} {Mouse: ENSMUSG00000031839, Hsbp1, heat shock factor binding protein 1, [RH, Score=75.9, Expect=1e-19]} {Dmel: FBgn0032429, CG5446, [RH, Score=78.6, Expect=9e-21]} {Celegans: WBGene00002002, hsb-1, Heat Shock factor Binding protein, [RH, Score=58.5, Expect=5e-13]} {Smed: dd_Smed_v6_15016_0_1, dd_Smed_v6_15016_0_1, [Score=78.6, Expect=4e-21]} {RNA1509_10103} {RNA1310_39673} {RNA815_17924.1} |
| 5. | MligTC455_20755 | 2687 | 55.98 | Mlig455_015704 | Neo: - Age: Down-Up-Up Region-enriched R4: 1.131/0.01413 |
NDUFA12 | 0.968 | - | - | - | 0.968 | - | - | Mlig455_015704 {REF} {Length: 648} {Pfam: NADH ubiquinone oxidoreductase subunit NDUFA12 [PF05071.18, score=102.2]} {Human: ENSG00000184752, NDUFA12, NADH:ubiquinone oxidoreductase subunit A12, [Score=117, Expect=2e-34]} {Mouse: ENSMUSG00000020022, Ndufa12, NADH:ubiquinone oxidoreductase subunit A12, [Score=116, Expect=4e-34]} {Dmel: FBgn0031436, ND-B17.2, NADH dehydrogenase (ubiquinone) B17.2 subunit, [Score=130, Expect=9e-40]} {Celegans: WBGene00022380, Y94H6A.8, Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12, [Score=122, Expect=1e-36]} {Smed: dd_Smed_v6_988_0_1, dd_Smed_v6_988_0_1, [Score=145, Expect=3e-46]} {RNA1509_52617} {RNA1310_27545} {RNA815_20165} |
| 6. | MligTC455_17650 | 1008 | 20.99 | Mlig455_049663, Mlig455_052831 | Neo: Int S/G2/M Age: - Region-enriched R4: 2.397/0.00001 |
MED10 | 0.962 | - | - | - | 0.962 | - | - | Mlig455_049663 {REF} {Length: 661} {TRANSSPLICED} {Pfam: Transcription factor subunit Med10 of Mediator complex [PF09748.11, score=98.2]} {Human: ENSG00000133398, MED10, mediator complex subunit 10, [RH, Score=138, Expect=2e-42]} {Mouse: ENSMUSG00000021598, Med10, mediator complex subunit 10, [RH, Score=139, Expect=1e-42]} {Dmel: FBgn0036581, MED10, Mediator complex subunit 10, [RH, Score=108, Expect=9e-31]} {Celegans: WBGene00007014, mdt-10, Mediator of RNA polymerase II transcription subunit 10, [RH, Score=92.0, Expect=5e-24]} {Smed: dd_Smed_v6_5622_0_1, dd_Smed_v6_5622_0_1, [RH, Score=130, Expect=3e-39]} {RNA1509_21767, RNA1509_32607, RNA1509_44155} {RNA1310_57954.1, RNA1509_21767, RNA1509_44155} {RNA1509_21767, RNA1509_44155, RNA815_28335} Mlig455_052831 {REF} {Length: 505} {TRANSSPLICED} {Pfam: Transcription factor subunit Med10 of Mediator complex [PF09748.11, score=98.2]} {Human: ENSG00000133398, MED10, mediator complex subunit 10, [RH, Score=138, Expect=2e-42]} {Mouse: ENSMUSG00000021598, Med10, mediator complex subunit 10, [RH, Score=139, Expect=1e-42]} {Dmel: FBgn0036581, MED10, Mediator complex subunit 10, [RH, Score=108, Expect=9e-31]} {Celegans: WBGene00007014, mdt-10, Mediator of RNA polymerase II transcription subunit 10, [RH, Score=92.0, Expect=5e-24]} {Smed: dd_Smed_v6_5622_0_1, dd_Smed_v6_5622_0_1, [RH, Score=130, Expect=3e-39]} {RNA1509_44202} {RNA1310_57954.1, RNA1509_44202} {RNA1509_44202, RNA815_28335} |
| 7. | MligTC455_42529 | 1053 | 21.93 | Mlig455_050818 | Neo: Irradiation Age: logFC(26M/2M)=0.320 Region-specific R5: 4.061 Region-enriched R5: 3.801/0.00000 |
0.961 | - | - | - | 0.961 | - | - | Mlig455_050818 {REF} {Length: 1422} {TRANSSPLICED} {RNA1509_10427, RNA1509_20462, RNA1509_24340} {RNA1310_21686, RNA1509_10427, RNA1509_20462, RNA1509_24340} {RNA1509_10427, RNA1509_20462, RNA1509_24340, RNA815_8467.1} | |
| 8. | MligTC455_51573 | 711 | 14.82 | Mlig455_022798 | Neo: - Age: Down-Up-Down Region-enriched R5: 1.108/0.00472 |
NAE1 | 0.961 | - | - | - | 0.961 | - | - | Mlig455_022798 {REF} {Length: 5749} {Pfam: ThiF family [PF00899.23, score=75.9]} {Human: ENSG00000159593, NAE1, NEDD8 activating enzyme E1 subunit 1, [RH, Score=391, Expect=5e-121]} {Mouse: ENSMUSG00000031878, Nae1, NEDD8 activating enzyme E1 subunit 1, [RH, Score=395, Expect=1e-122]} {Dmel: FBgn0261112, APP-BP1, beta-Amyloid precursor protein binding protein 1, [RH, Score=325, Expect=1e-97]} {Celegans: WBGene00006735, ula-1, NEDD8-activating enzyme E1 regulatory subunit, [Score=259, Expect=8e-75]} {Smed: dd_Smed_v6_4907_0_1, dd_Smed_v6_4907_0_1, [RH, Score=368, Expect=4e-113]} {RNA1509_57386} {RNA1310_3169} {RNA815_2625} |
| 9. | MligTC455_42528 | 974 | 20.3 | Mlig455_043278 | Neo: - Age: - Region-specific R5: 4.050 Region-enriched R5: 3.762/0.00000 |
0.96 | - | - | - | 0.960 | - | - | Mlig455_043278 {REF} {Length: 1530} {TRANSSPLICED} {RNA1509_24340, RNA1509_36228} {RNA1310_19693, RNA1509_36228} {RNA1509_36228, RNA815_8467.1} | |
| 10. | MligTC455_43139 | 689 | 14.36 | Mlig455_042788 | Neo: - Age: logFC(26M/2M)=-0.523 Region-enriched R3: 2.035/0.00139 |
SLC26A4 | 0.954 | - | - | - | 0.954 | - | - | Mlig455_042788 {REF} {Length: 5105} {Pfam: Sulfate permease family [PF00916.22, score=275.4]; STAS domain [PF01740.23, score=81.6]} {Human: ENSG00000091137, SLC26A4, solute carrier family 26 member 4, [Score=376, Expect=3e-116]; ENSG00000170615, SLC26A5, solute carrier family 26 member 5, [Score=366, Expect=8e-113]} {Mouse: ENSMUSG00000029015, Slc26a5, solute carrier family 26, member 5, [Score=372, Expect=4e-115]; ENSMUSG00000020651, Slc26a4, solute carrier family 26, member 4, [Score=357, Expect=5e-109]} {Dmel: FBgn0036770, Prestin, [Score=219, Expect=6e-60]} {Celegans: WBGene00013963, sulp-8, Anion transporter SULP-8a; Anion transporter SULP-8b; SULfate Permease family, [Score=267, Expect=5e-78]} {Smed: dd_Smed_v6_8150_0_1, dd_Smed_v6_8150_0_1, [Score=388, Expect=2e-120]} {RNA1509_10628} {RNA1310_6089} {RNA815_419.1} |
| 11. | MligTC455_21826 | 354 | 7.38 | Mlig455_039251 | Neo: - Age: logFC(26M/2M)=0.947 Regeneration-upregulated R5: 3.707 Regeneration-enriched R5: 3.707 |
0.953 | - | - | - | 0.953 | - | - | Mlig455_039251 {REF} {Length: 3547} {RNA1509_29876} {RNA1310_11175.1} {RNA815_3499} | |
| 12. | MligTC455_40147 | 1483 | 30.89 | Mlig455_051335, Mlig455_068603 | Neo: - Age: - Region-enriched R3: 1.297/0.03059 |
BBOX1 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_051335 {REF} {Length: 2284} {Pfam: Taurine catabolism dioxygenase TauD, TfdA family [PF02668.18, score=127.5]; Gamma-butyrobetaine hydroxylase-like, N-terminal [PF06155.14, score=52.9]} {Human: ENSG00000129151, BBOX1, gamma-butyrobetaine hydroxylase 1, [Score=207, Expect=5e-62]} {Mouse: ENSMUSG00000041660, Bbox1, butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase), [Score=209, Expect=6e-63]} {Dmel: FBgn0030575, CG5321, [Score=219, Expect=1e-66]} {Celegans: WBGene00001522, gbh-1, Probable gamma-butyrobetaine dioxygenase, [Score=186, Expect=8e-54]} {Smed: dd_Smed_v6_42907_0_1, dd_Smed_v6_42907_0_1, [RH, Score=82.8, Expect=1e-17]} {RNA1509_39411} {RNA1310_11782.2} {RNA815_4372} Mlig455_068603 {REF} {Length: 3563} {Pfam: Taurine catabolism dioxygenase TauD, TfdA family [PF02668.18, score=127.3]; Gamma-butyrobetaine hydroxylase-like, N-terminal [PF06155.14, score=54.4]} {Human: ENSG00000129151, BBOX1, gamma-butyrobetaine hydroxylase 1, [Score=209, Expect=1e-62]} {Mouse: ENSMUSG00000041660, Bbox1, butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase), [Score=210, Expect=2e-63]} {Dmel: FBgn0030575, CG5321, [Score=219, Expect=1e-66]} {Celegans: WBGene00001522, gbh-1, Probable gamma-butyrobetaine dioxygenase, [RH, Score=189, Expect=4e-55]} {Smed: dd_Smed_v6_42907_0_1, dd_Smed_v6_42907_0_1, [RH, Score=82.4, Expect=1e-17]} {RNA1509_39411, RNA1509_9945} {RNA1310_11782.2, RNA1509_39411, RNA1509_9945} {RNA1509_39411, RNA1509_9945, RNA815_4372} |
| 13. | MligTC455_34598 | 684 | 14.25 | Mlig455_038346 | Neo: - Age: Up-Down-Down |
DDX4 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_038346 {REF} {Length: 4699} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=150.9]; Helicase conserved C-terminal domain [PF00271.33, score=89.5]; Zinc knuckle [PF00098.25, score=50.0]; Type III restriction enzyme, res subunit [PF04851.17, score=25.5]; Zinc knuckle [PF13696.8, score=21.8]; Zinc knuckle [PF13917.8, score=18.8]} {Human: ENSG00000152670, DDX4, DEAD-box helicase 4, [Score=377, Expect=5e-117]} {Mouse: ENSMUSG00000021758, Ddx4, DEAD (Asp-Glu-Ala-Asp) box polypeptide 4, [Score=371, Expect=4e-115]} {Dmel: FBgn0283442, vas, vasa, [Score=360, Expect=5e-112]} {Celegans: WBGene00001599, glh-2, ATP-dependent RNA helicase glh-2, [RH, Score=358, Expect=6e-108]} {Smed: dd_Smed_v6_1985_0_1, dd_Smed_v6_1985_0_1, [RH, Score=404, Expect=9e-126]} {RNA1509_51291} {RNA1310_5204.1} {RNA815_10854} |