Data search
Results for MligTC455_51681
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_51681 | 762 | 15.87 | Mlig455_009904 | Neo: - Age: - Regeneration-upregulated BL: 1.809 Regeneration-enriched BL: 1.809 |
YBX3 | Mlig455_009904 {REF} {Length: 3925} {Pfam: 'Cold-shock' DNA-binding domain [PF00313.24, score=92.6]} {Human: ENSG00000060138, YBX3, Y-box binding protein 3, [RH, Score=161, Expect=2e-47]; ENSG00000065978, YBX1, Y-box binding protein 1, [RH, Score=157, Expect=2e-45]; ENSG00000006047, YBX2, Y-box binding protein 2, [RH, Score=153, Expect=2e-43]} {Mouse: ENSMUSG00000030189, Ybx3, Y box protein 3, [RH, Score=162, Expect=8e-48]; ENSMUSG00000028639, Ybx1, Y box protein 1, [RH, Score=157, Expect=1e-45]} {Dmel: FBgn0022959, yps, ypsilon schachtel, [RH, Score=154, Expect=2e-44]} {Celegans: WBGene00000472, cey-1, C. Elegans Y-box, [RH, Score=146, Expect=4e-43]} {Smed: dd_Smed_v6_25570_0_1, dd_Smed_v6_25570_0_1, [Score=162, Expect=1e-47]} {RNA1509_14234, RNA1509_43002} {RNA1310_16756, RNA1509_14234} {RNA1509_14234, RNA815_19171.1} |
Cumulative graph for MligTC455_51681
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.258 | 4.276 | 0.81509 | 1.00000 | |
| RegionR2 | -0.062 | 4.276 | 0.88144 | 1.00000 | |
| RegionR3 | 0.077 | 4.276 | 0.81288 | 1.00000 | |
| RegionR4 | 0.777 | 4.276 | 0.03274 | 0.14448 | |
| RegionR5 | 0.754 | 4.276 | 0.00575 | 0.03855 | |
| RegionR6 | 0.365 | 4.276 | 0.27068 | 0.85992 | |
| RegionR7 | -1.118 | 4.276 | 0.05249 | 0.44066 | |
| RegionR8 | -0.534 | 4.276 | 0.41467 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.705 | 4.276 | 0.68595 | 1.00000 | |
| RegenerationR2 | 0.636 | 4.276 | 0.02908 | 0.28063 | |
| RegenerationR3 | 0.635 | 4.276 | 0.05005 | 0.38781 | |
| RegenerationR4 | -0.059 | 4.276 | 0.85779 | 1.00000 | |
| RegenerationR5 | 0.144 | 4.276 | 0.60196 | 0.91069 | |
| RegenerationR6 | 0.46 | 4.276 | 0.15943 | 0.48727 | |
| RegenerationBL | 1.809 | 4.276 | 0.00001 | 0.00083 | Specific for BL: 1.809 |
| RegenerationTP | 0.236 | 4.276 | 0.70281 | 1.00000 |
Genes with expression patterns similar to MligTC455_51681
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_51681 | 762 | 15.87 | Mlig455_009904 | Neo: - Age: - Regeneration-upregulated BL: 1.809 Regeneration-enriched BL: 1.809 |
YBX3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_009904 {REF} {Length: 3925} {Pfam: 'Cold-shock' DNA-binding domain [PF00313.24, score=92.6]} {Human: ENSG00000060138, YBX3, Y-box binding protein 3, [RH, Score=161, Expect=2e-47]; ENSG00000065978, YBX1, Y-box binding protein 1, [RH, Score=157, Expect=2e-45]; ENSG00000006047, YBX2, Y-box binding protein 2, [RH, Score=153, Expect=2e-43]} {Mouse: ENSMUSG00000030189, Ybx3, Y box protein 3, [RH, Score=162, Expect=8e-48]; ENSMUSG00000028639, Ybx1, Y box protein 1, [RH, Score=157, Expect=1e-45]} {Dmel: FBgn0022959, yps, ypsilon schachtel, [RH, Score=154, Expect=2e-44]} {Celegans: WBGene00000472, cey-1, C. Elegans Y-box, [RH, Score=146, Expect=4e-43]} {Smed: dd_Smed_v6_25570_0_1, dd_Smed_v6_25570_0_1, [Score=162, Expect=1e-47]} {RNA1509_14234, RNA1509_43002} {RNA1310_16756, RNA1509_14234} {RNA1509_14234, RNA815_19171.1} |
| 2. | MligTC455_27686 | 1610 | 33.54 | Mlig455_051403 | Neo: Irradiation Age: logFC(26M/2M)=0.196 Regeneration-enriched BL: 1.647 |
ZFP62 | 3.937 | - | 0.726 | 0.951 | 0.756 | 0.782 | 0.722 | Mlig455_051403 {REF} {Length: 6148} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=89.8]; Zinc-finger double domain [PF13465.8, score=82.9]; Zinc finger, C2H2 type [PF00096.28, score=66.6]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=23.7]} {Human: ENSG00000196670, ZFP62, ZFP62 zinc finger protein, [Score=153, Expect=5e-37]; ENSG00000167380, ZNF226, zinc finger protein 226, [Score=153, Expect=3e-37]; ENSG00000272602, ZNF595, zinc finger protein 595, [Score=153, Expect=9e-39]; ENSG00000196867, ZFP28, ZFP28 zinc finger protein, [Score=150, Expect=4e-36]; ENSG00000197961, ZNF121, zinc finger protein 121, [Score=149, Expect=3e-38]; ENSG00000283201, AC092329.3, novel protein, [Score=147, Expect=1e-36]} {Mouse: ENSMUSG00000063108, Zfp26, zinc finger protein 26, [Score=154, Expect=2e-37]; ENSMUSG00000049321, Zfp2, zinc finger protein 2, [Score=149, Expect=1e-37]; ENSMUSG00000046311, Zfp62, zinc finger protein 62, [Score=147, Expect=3e-35]; ENSMUSG00000062861, Zfp28, zinc finger protein 28, [Score=147, Expect=2e-35]} {Dmel: FBgn0020309, crol, crooked legs, [Score=127, Expect=2e-29]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [Score=84.7, Expect=4e-17]} {Smed: dd_Smed_v6_5058_0_1, dd_Smed_v6_5058_0_1, [RH, Score=830, Expect=0.0]} {RNA1509_1385, RNA1509_20143, RNA1509_31545} {RNA1310_615.1, RNA1509_1385, RNA1509_20143, RNA1509_31545} {RNA1509_1385, RNA1509_20143, RNA1509_31545, RNA815_756} |
| 3. | MligTC455_24088 | 1082 | 22.53 | Mlig455_017398, Mlig455_030918 | Neo: - Age: - Regeneration-downregulated TP: -2.327 Regeneration-depleted TP: -2.327 |
CBS | 2.579 | - | - | - | 0.806 | 0.819 | 0.954 | Mlig455_017398 {REF} {Length: 2236} {TRANSSPLICED} {Pfam: Pyridoxal-phosphate dependent enzyme [PF00291.27, score=216.9]; CBS domain [PF00571.30, score=48.7]} {Human: ENSG00000160200, CBS, cystathionine-beta-synthase, [Score=593, Expect=0.0]; ENSG00000274276, CBSL, cystathionine-beta-synthase like, [Score=593, Expect=0.0]} {Mouse: ENSMUSG00000024039, Cbs, cystathionine beta-synthase, [Score=598, Expect=0.0]} {Dmel: FBgn0031148, Cbs, centrosomin's beautiful sister, [RH, Score=442, Expect=2e-151]} {Celegans: WBGene00013866, cbs-1, Cystathionine Beta-Synthase, [RH, Score=365, Expect=6e-119]} {Smed: dd_Smed_v6_1585_0_1, dd_Smed_v6_1585_0_1, [RH, Score=642, Expect=0.0]} {RNA1509_32341} {RNA1310_10466.1} {RNA815_2644.1} Mlig455_030918 {REF} {Length: 2927} {TRANSSPLICED} {Pfam: Pyridoxal-phosphate dependent enzyme [PF00291.27, score=199.2]; CBS domain [PF00571.30, score=49.2]} {Human: ENSG00000160200, CBS, cystathionine-beta-synthase, [Score=557, Expect=0.0]; ENSG00000274276, CBSL, cystathionine-beta-synthase like, [Score=557, Expect=0.0]} {Mouse: ENSMUSG00000024039, Cbs, cystathionine beta-synthase, [Score=558, Expect=0.0]} {Dmel: FBgn0031148, Cbs, centrosomin's beautiful sister, [Score=409, Expect=9e-139]} {Celegans: WBGene00013866, cbs-1, Cystathionine Beta-Synthase, [Score=335, Expect=4e-108]} {Smed: dd_Smed_v6_1585_0_1, dd_Smed_v6_1585_0_1, [Score=603, Expect=0.0]} {RNA1509_32341} {RNA1310_10466.1} {RNA815_2644.1} |
| 4. | MligTC455_46356 | 690 | 14.38 | Mlig455_013999 | Neo: Irradiation Age: - |
1.787 | - | - | 0.966 | 0.821 | - | - | Mlig455_013999 {REF} {Length: 3399} {TRANSSPLICED} {RNA1509_17744} {RNA1310_20079, RNA1509_17744} {RNA1509_17744, RNA815_21139.2} | |
| 5. | MligTC455_08832 | 2267 | 47.23 | Mlig455_017993 | Neo: - Age: Up-Down-Up |
NNT | 1.702 | 0.749 | - | - | - | - | 0.953 | Mlig455_017993 {REF} {Length: 4560} {Pfam: NAD(P) transhydrogenase beta subunit [PF02233.18, score=608.5]; Alanine dehydrogenase/PNT, C-terminal domain [PF01262.23, score=249.2]; Alanine dehydrogenase/PNT, N-terminal domain [PF05222.17, score=151.5]; 4TM region of pyridine nucleotide transhydrogenase, mitoch [PF12769.9, score=107.1]} {Human: ENSG00000112992, NNT, nicotinamide nucleotide transhydrogenase, [RH, Score=1402, Expect=0.0]} {Mouse: ENSMUSG00000116207, Nnt, nicotinamide nucleotide transhydrogenase, [RH, Score=765, Expect=0.0]; ENSMUSG00000025453, Nnt, nicotinamide nucleotide transhydrogenase, [RH, Score=765, Expect=0.0]} {Celegans: WBGene00003778, nnt-1, Nicotinamide Nucleotide Transhydrogenase, [RH, Score=1240, Expect=0.0]} {Smed: dd_Smed_v6_2313_0_1, dd_Smed_v6_2313_0_1, [RH, Score=1518, Expect=0.0]} {RNA1509_2271} {RNA1310_1932.1} {RNA815_1291} |
| 6. | MligTC455_17419 | 795 | 16.56 | Mlig455_032917 | Neo: - Age: logFC(26M/2M)=0.606 |
0.958 | - | - | - | - | 0.958 | - | Mlig455_032917 {REF} {Length: 1667} {TRANSSPLICED} {Pfam: Apoptosis regulator proteins, Bcl-2 family [PF00452.21, score=26.3]} {RNA1509_22828, RNA1509_38661} {RNA1310_37599.1, RNA1509_22828, RNA1509_38661} {RNA1509_22828, RNA1509_38661, RNA815_17225} | |
| 7. | MligTC455_43830 | 360 | 7.5 | Mlig455_015799 | Neo: - Age: - Region-enriched R5: 2.255/0.00263 |
GGNBP2 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_015799 {REF} {Length: 2732} {TRANSSPLICED} {Human: ENSG00000275099, GGNBP2, gametogenetin binding protein 2, [RH, Score=213, Expect=1e-59]; ENSG00000278311, GGNBP2, gametogenetin binding protein 2, [RH, Score=213, Expect=1e-59]} {Mouse: ENSMUSG00000020530, Ggnbp2, gametogenetin binding protein 2, [RH, Score=215, Expect=3e-60]} {Dmel: FBgn0037360, CG2182, [RH, Score=189, Expect=2e-51]} {RNA1509_4032} {RNA1310_6982.1} {RNA815_3313.1} |
| 8. | MligTC455_52795 | 674 | 14.04 | Mlig455_058194 | Neo: - Age: - |
TMEM117 | 0.953 | - | - | - | 0.953 | - | - | Mlig455_058194 {REF} {Length: 4435} {TRANSSPLICED} {Pfam: TMEM117 protein family [PF15113.8, score=543.0]} {Human: ENSG00000139173, TMEM117, transmembrane protein 117, [RH, Score=419, Expect=3e-137]} {Mouse: ENSMUSG00000063296, Tmem117, transmembrane protein 117, [RH, Score=422, Expect=5e-139]} {RNA1509_36999, RNA1509_4844} {RNA1310_1174, RNA1509_36999, RNA1509_4844} {RNA1509_36999, RNA1509_4844, RNA815_2317.1} |
| 9. | MligTC455_39536 | 2251 | 46.9 | Mlig455_008794, Mlig455_008925 | Neo: - Age: - |
TPM1, TPM2 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_008794 {REF} {Length: 3744} {Pfam: Tropomyosin [PF00261.22, score=52.0]; Tropomyosin like [PF12718.9, score=40.0]; Spc19 [PF08287.13, score=25.6]} {Human: ENSG00000198467, TPM2, tropomyosin 2, [Score=57.4, Expect=2e-08]; ENSG00000143549, TPM3, tropomyosin 3, [Score=56.6, Expect=3e-08]; ENSG00000140416, TPM1, tropomyosin 1, [Score=54.7, Expect=1e-07]} {Mouse: ENSMUSG00000058126, Tpm3-rs7, tropomyosin 3, related sequence 7, [Score=57.0, Expect=1e-08]; ENSMUSG00000027940, Tpm3, tropomyosin 3, gamma, [Score=56.2, Expect=2e-08]; ENSMUSG00000028464, Tpm2, tropomyosin 2, beta, [Score=55.5, Expect=5e-08]} {Dmel: FBgn0003721, Tm1, Tropomyosin 1, [Score=86.7, Expect=1e-17]} {Smed: dd_Smed_v6_405_0_1, dd_Smed_v6_405_0_1, [Score=64.3, Expect=3e-11]} {RNA1509_15131} {RNA1310_18171} {RNA815_7914.1} Mlig455_008925 {REF} {Length: 4710} {Pfam: Tropomyosin [PF00261.22, score=185.7]; Tropomyosin like [PF12718.9, score=53.7]; Spc19 [PF08287.13, score=24.0]} {Human: ENSG00000140416, TPM1, tropomyosin 1, [Score=120, Expect=3e-30]; ENSG00000143549, TPM3, tropomyosin 3, [Score=117, Expect=4e-29]} {Mouse: ENSMUSG00000027940, Tpm3, tropomyosin 3, gamma, [Score=121, Expect=1e-30]; ENSMUSG00000032366, Tpm1, tropomyosin 1, alpha, [Score=118, Expect=1e-29]; ENSMUSG00000031799, Tpm4, tropomyosin 4, [Score=115, Expect=2e-28]} {Dmel: FBgn0003721, Tm1, Tropomyosin 1, [Score=154, Expect=2e-39]} {Celegans: WBGene00002978, lev-11, Tropomyosin isoforms a/b/d/f, [Score=140, Expect=1e-37]} {Smed: dd_Smed_v6_436_0_1, dd_Smed_v6_436_0_1, [Score=142, Expect=2e-38]} {RNA1509_15131} {RNA1310_18171} {RNA815_13599} |
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