TomoSeq data search

Data search

Results for MligTC455_17698

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_17698

60

1.24

Mlig455_043407

Neo: -

Age: -

Mlig455_043407 {REF} {Length: 2632} {NoTransDecoderORF} {RNA1509_38864} {RNA1310_23415} {RNA815_19995}

Cumulative graph for MligTC455_17698

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2	1.588	1.00000	1.00000
RegionR2	0.971	1.588	0.45218	0.83972
RegionR3	0.498	1.588	0.56320	1.00000
RegionR4	2.674	1.588	0.04706	0.18509
RegionR5	1.07	1.588	0.29166	0.62360
RegionR6	-0.647	1.588	0.88435	1.00000
RegionR7	-4.35	1.588	1.00000	1.00000
RegionR8	1.785	1.588	0.24353	0.86006

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.094	1.588	0.99992	1.00000
RegenerationR2	-0.831	1.588	0.37806	0.80032
RegenerationR3	-0.351	1.588	0.71368	0.95292
RegenerationR4	-1.143	1.588	0.27487	0.72085
RegenerationR5	-0.06	1.588	0.94126	1.00000
RegenerationR6	1.093	1.588	0.36794	0.71095
RegenerationBL	1.712	1.588	0.34290	0.70986
RegenerationTP	1.029	1.588	0.54054	0.92617

Genes with expression patterns similar to MligTC455_17698

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_17698	60	1.24	Mlig455_043407	Neo: - Age: -		5	1.000	1.000	-	1.000	1.000	1.000	Mlig455_043407 {REF} {Length: 2632} {NoTransDecoderORF} {RNA1509_38864} {RNA1310_23415} {RNA815_19995}
2.	MligTC455_17699	65	1.36	Mlig455_043426	Neo: - Age: Up-Down-Down		4.863	0.990	1.000	-	0.989	0.904	0.980	Mlig455_043426 {REF} {Length: 3824} {RNA1509_38864} {RNA1310_23415, RNA1509_38864} {RNA1509_38864, RNA815_19995}
3.	MligTC455_52264	118	2.46	Mlig455_018245	Neo: - Age: - Region-enriched R5: 1.942/0.04303	GIT2	0.975	-	-	-	-	-	0.975	Mlig455_018245 {REF} {Length: 5129} {Pfam: G protein-coupled receptor kinase-interacting protein 1 C term [PF12205.10, score=90.3]; Putative GTPase activating protein for Arf [PF01412.20, score=81.5]; Spa2 homology domain (SHD) of GIT [PF08518.13, score=44.2]; Coiled-coil domain-containing protein 106 [PF15794.7, score=19.5]} {Human: ENSG00000139436, GIT2, GIT ArfGAP 2, [RH, Score=328, Expect=4e-99]; ENSG00000108262, GIT1, GIT ArfGAP 1, [RH, Score=324, Expect=4e-97]} {Mouse: ENSMUSG00000041890, Git2, G protein-coupled receptor kinase-interactor 2, [RH, Score=328, Expect=1e-99]; ENSMUSG00000011877, Git1, G protein-coupled receptor kinase-interactor 1, [RH, Score=325, Expect=2e-97]} {Dmel: FBgn0033539, Git, G protein-coupled receptor kinase interacting ArfGAP, [RH, Score=282, Expect=3e-82]} {Celegans: WBGene00008805, git-1, GIT1 (Mammalian G protein-coupled receptor kinase InTeractor 1) homolog, [Score=177, Expect=4e-46]} {Smed: dd_Smed_v6_7569_0_1, dd_Smed_v6_7569_0_1, [RH, Score=327, Expect=1e-97]} {RNA1509_17579} {RNA1310_2666.1, RNA1509_17579} {RNA1509_17579, RNA815_12698}
4.	MligTC455_15690	117	2.43	Mlig455_068703	Neo: Irradiation Age: - Regeneration-enriched R6: 7.474 Regeneration-enriched BL: 6.776 Regeneration-enriched R3: 5.564 Regeneration-enriched R4: 5.451 Regeneration-enriched R5: 5.213		0.97	-	-	-	0.970	-	-	Mlig455_068703 {REF} {Length: 1557} {RNA1509_38578} {RNA1310_39831} {RNA815_50594}
5.	MligTC455_15689	115	2.4	Mlig455_032535	Neo: - Age: - Regeneration-enriched R6: 7.489 Regeneration-enriched BL: 6.877 Regeneration-enriched R4: 5.608 Regeneration-enriched R3: 5.570 Regeneration-enriched R5: 5.313		0.964	-	-	-	0.964	-	-	Mlig455_032535 {REF} {Length: 487} {NoTransDecoderORF} {RNA1509_23966} {RNA1310_63649} {RNA815_50594}
6.	MligTC455_48132	13	0.26	Mlig455_063178	Neo: - Age: -	PARP2	0.963	-	-	-	0.963	-	-	Mlig455_063178 {REF} {Length: 2282} {TRANSSPLICED} {Pfam: Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=210.5]; Poly(ADP-ribose) polymerase, regulatory domain [PF02877.16, score=142.9]; WGR domain [PF05406.17, score=88.1]; WWE domain [PF02825.22, score=79.0]} {Human: ENSG00000129484, PARP2, poly(ADP-ribose) polymerase 2, [RH, Score=510, Expect=3e-173]} {Mouse: ENSMUSG00000036023, Parp2, poly (ADP-ribose) polymerase family, member 2, [RH, Score=525, Expect=1e-179]} {Dmel: FBgn0010247, Parp, Poly-(ADP-ribose) polymerase, [Score=325, Expect=1e-97]} {Celegans: WBGene00004049, parp-1, Poly(ADP-ribose) polymerase pme-1, [Score=304, Expect=2e-90]} {Smed: dd_Smed_v6_6154_0_8, dd_Smed_v6_6154_0_8, [RH, Score=484, Expect=4e-161]} {RNA1509_8942} {RNA1310_3564} {RNA815_7699}
7.	MligTC455_09549	27	0.56	Mlig455_020376, Mlig455_020436	Neo: - Age: Up-Down-Up, logFC(26M/2M)=3.308		0.958	-	-	-	0.958	-	-	Mlig455_020376 {REF} {Length: 2681} {Pfam: Domain of unknown function (DUF4337) [PF14235.8, score=21.6]} {RNA1509_43025} {RNA1310_31813} {RNA815_27771} Mlig455_020436 {REF} {Length: 2495} {Pfam: Domain of unknown function (DUF4337) [PF14235.8, score=21.7]} {RNA1509_43025} {RNA1310_83898} {RNA815_27771}
8.	MligTC455_38480	53	1.11	Mlig455_060125	Neo: - Age: Up-Down-Down	CDK19	0.958	-	-	-	-	-	0.958	Mlig455_060125 {REF} {Length: 5520} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=193.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=90.4]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=20.7]} {Human: ENSG00000155111, CDK19, cyclin dependent kinase 19, [Score=472, Expect=4e-162]; ENSG00000132964, CDK8, cyclin dependent kinase 8, [Score=469, Expect=1e-161]} {Mouse: ENSMUSG00000038481, Cdk19, cyclin-dependent kinase 19, [Score=471, Expect=5e-162]; ENSMUSG00000029635, Cdk8, cyclin-dependent kinase 8, [Score=470, Expect=3e-162]} {Dmel: FBgn0015618, Cdk8, Cyclin-dependent kinase 8, [Score=460, Expect=2e-158]} {Celegans: WBGene00000409, cdk-8, Cyclin-dependent kinase 8, [Score=414, Expect=1e-138]} {Smed: dd_Smed_v6_6004_0_2, dd_Smed_v6_6004_0_2, [Score=450, Expect=1e-154]} {RNA1509_29840} {RNA1310_20139} {RNA815_12999}
9.	MligTC455_18158	7	0.14	Mlig455_062254	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_062254 {REF} {Length: 2469} {TRANSSPLICED} {Pfam: CEL-III C-terminal [PF18054.3, score=18.9]} {RNA1509_2515} {RNA1310_28603.1} {RNA815_3258.1}
10.	MligTC455_36450	63	1.32	Mlig455_019216	Neo: - Age: Down-Up-Down		0.95	-	-	-	-	-	0.950	Mlig455_019216 {REF} {Length: 972} {RNA1509_36471} {RNA1310_4381} {RNA815_59293}

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