Data search
Results for MligTC455_17699
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_17699 | 65 | 1.36 | Mlig455_043426 | Neo: - Age: Up-Down-Down |
Mlig455_043426 {REF} {Length: 3824} {RNA1509_38864} {RNA1310_23415, RNA1509_38864} {RNA1509_38864, RNA815_19995} |
Cumulative graph for MligTC455_17699
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.134 | 1.666 | 1.00000 | 1.00000 | |
| RegionR2 | 1.089 | 1.666 | 0.40819 | 0.80158 | |
| RegionR3 | 0.382 | 1.666 | 0.60961 | 1.00000 | |
| RegionR4 | 2.578 | 1.666 | 0.05398 | 0.20302 | |
| RegionR5 | 0.88 | 1.666 | 0.37821 | 0.73233 | |
| RegionR6 | -0.193 | 1.666 | 0.79569 | 1.00000 | |
| RegionR7 | -4.378 | 1.666 | 1.00000 | 1.00000 | |
| RegionR8 | 1.777 | 1.666 | 0.24453 | 0.86128 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.34 | 1.666 | 0.99993 | 1.00000 | |
| RegenerationR2 | -0.71 | 1.666 | 0.43323 | 0.83622 | |
| RegenerationR3 | -0.094 | 1.666 | 0.91058 | 1.00000 | |
| RegenerationR4 | -1.114 | 1.666 | 0.27599 | 0.72143 | |
| RegenerationR5 | -0.032 | 1.666 | 0.96390 | 1.00000 | |
| RegenerationR6 | 0.651 | 1.666 | 0.56797 | 0.85031 | |
| RegenerationBL | 1.327 | 1.666 | 0.43368 | 0.80219 | |
| RegenerationTP | 0.914 | 1.666 | 0.56684 | 0.94269 |
Genes with expression patterns similar to MligTC455_17699
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_17699 | 65 | 1.36 | Mlig455_043426 | Neo: - Age: Up-Down-Down |
5 | 1.000 | 1.000 | - | 1.000 | 1.000 | 1.000 | Mlig455_043426 {REF} {Length: 3824} {RNA1509_38864} {RNA1310_23415, RNA1509_38864} {RNA1509_38864, RNA815_19995} | |
| 2. | MligTC455_17698 | 60 | 1.24 | Mlig455_043407 | Neo: - Age: - |
4.863 | 0.990 | 1.000 | - | 0.989 | 0.904 | 0.980 | Mlig455_043407 {REF} {Length: 2632} {NoTransDecoderORF} {RNA1509_38864} {RNA1310_23415} {RNA815_19995} | |
| 3. | MligTC455_38446 | 270 | 5.61 | Mlig455_040804 | Neo: Irradiation Age: - Region-enriched R5: 1.394/0.00361 |
USP1 | 1.874 | - | - | - | 0.892 | - | 0.982 | Mlig455_040804 {REF} {Length: 12141} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=119.0]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=47.0]; Thyroglobulin type-1 repeat [PF00086.20, score=45.3]} {Human: ENSG00000162607, USP1, ubiquitin specific peptidase 1, [Score=77.8, Expect=3e-13]; ENSG00000152484, USP12, ubiquitin specific peptidase 12, [Score=76.6, Expect=2e-13]; ENSG00000090686, USP48, ubiquitin specific peptidase 48, [Score=74.3, Expect=4e-12]} {Mouse: ENSMUSG00000028560, Usp1, ubiquitin specific peptidase 1, [Score=86.3, Expect=5e-16]} {Dmel: FBgn0039025, Usp12-46, Ubiquitin-specific protease 12/46, [Score=80.9, Expect=6e-15]} {Celegans: WBGene00011216, usp-46, Ubiquitin carboxyl-terminal hydrolase 46, [Score=84.7, Expect=2e-16]} {Smed: dd_Smed_v6_6911_0_2, dd_Smed_v6_6911_0_2, [Score=80.9, Expect=3e-15]} {RNA1509_26776, RNA1509_40394, RNA1509_44304} {RNA1310_5651.2, RNA1509_40394, RNA1509_44304} {RNA1509_40394, RNA1509_44304, RNA815_12588} |
| 4. | MligTC455_40708 | 153 | 3.19 | Mlig455_067130 | Neo: - |
0.97 | - | - | - | - | 0.970 | - | Mlig455_067130 {REF} {Length: 503} {RNA1509_33165} {RNA1310_72431} {RNA815_38214} | |
| 5. | MligTC455_52264 | 118 | 2.46 | Mlig455_018245 | Neo: - Age: - Region-enriched R5: 1.942/0.04303 |
GIT2 | 0.966 | - | - | - | - | - | 0.966 | Mlig455_018245 {REF} {Length: 5129} {Pfam: G protein-coupled receptor kinase-interacting protein 1 C term [PF12205.10, score=90.3]; Putative GTPase activating protein for Arf [PF01412.20, score=81.5]; Spa2 homology domain (SHD) of GIT [PF08518.13, score=44.2]; Coiled-coil domain-containing protein 106 [PF15794.7, score=19.5]} {Human: ENSG00000139436, GIT2, GIT ArfGAP 2, [RH, Score=328, Expect=4e-99]; ENSG00000108262, GIT1, GIT ArfGAP 1, [RH, Score=324, Expect=4e-97]} {Mouse: ENSMUSG00000041890, Git2, G protein-coupled receptor kinase-interactor 2, [RH, Score=328, Expect=1e-99]; ENSMUSG00000011877, Git1, G protein-coupled receptor kinase-interactor 1, [RH, Score=325, Expect=2e-97]} {Dmel: FBgn0033539, Git, G protein-coupled receptor kinase interacting ArfGAP, [RH, Score=282, Expect=3e-82]} {Celegans: WBGene00008805, git-1, GIT1 (Mammalian G protein-coupled receptor kinase InTeractor 1) homolog, [Score=177, Expect=4e-46]} {Smed: dd_Smed_v6_7569_0_1, dd_Smed_v6_7569_0_1, [RH, Score=327, Expect=1e-97]} {RNA1509_17579} {RNA1310_2666.1, RNA1509_17579} {RNA1509_17579, RNA815_12698} |
| 6. | MligTC455_15690 | 117 | 2.43 | Mlig455_068703 | Neo: Irradiation Age: - Regeneration-enriched R6: 7.474 |
0.965 | - | - | - | 0.965 | - | - | Mlig455_068703 {REF} {Length: 1557} {RNA1509_38578} {RNA1310_39831} {RNA815_50594} | |
| 7. | MligTC455_16406 | 348 | 7.25 | Mlig455_028620, Mlig455_028644 | Neo: - Age: Down-Up-Down Region-enriched R8: 2.089/0.02921 |
0.965 | - | - | - | - | - | 0.965 | Mlig455_028620 {REF} {Length: 2517} {TRANSSPLICED} {Pfam: Herpesvirus BLRF2 protein [PF05812.14, score=24.5]} {RNA1509_47366} {RNA1310_17978.1} {RNA815_10314} Mlig455_028644 {REF} {Length: 2358} {TRANSSPLICED} {Pfam: Herpesvirus BLRF2 protein [PF05812.14, score=24.5]} {RNA1509_26279, RNA1509_40579, RNA1509_45161, RNA1509_47366, RNA1509_53187, RNA1509_54275, RNA1509_59984} {RNA1310_17978.1, RNA1509_26279, RNA1509_40579, RNA1509_45161, RNA1509_47366, RNA1509_53187, RNA1509_54275, RNA1509_59984} {RNA1509_26279, RNA1509_40579, RNA1509_45161, RNA1509_47366, RNA1509_53187, RNA1509_54275, RNA1509_59984, RNA815_10314} |
|
| 8. | MligTC455_05024 | 1378 | 28.71 | Mlig455_052094, Mlig455_057240 | Neo: - Age: - |
STIM1 | 0.964 | - | - | - | - | - | 0.964 | Mlig455_052094 {REF} {Length: 2805} {TRANSSPLICED} {Pfam: STIM1 Orai1-activating region [PF16533.7, score=68.8]; SAM domain (Sterile alpha motif) [PF07647.19, score=19.7]} {Human: ENSG00000167323, STIM1, stromal interaction molecule 1, [RH, Score=212, Expect=6e-58]} {Mouse: ENSMUSG00000030987, Stim1, stromal interaction molecule 1, [RH, Score=213, Expect=1e-58]} {Dmel: FBgn0045073, Stim, Stromal interaction molecule, [RH, Score=171, Expect=3e-45]} {Smed: dd_Smed_v6_7756_0_1, dd_Smed_v6_7756_0_1, [Score=187, Expect=3e-50]} {RNA1509_28451} {RNA1310_6332} {RNA815_2322.1} Mlig455_057240 {REF} {Length: 3276} {TRANSSPLICED} {Pfam: STIM1 Orai1-activating region [PF16533.7, score=70.1]} {Human: ENSG00000167323, STIM1, stromal interaction molecule 1, [RH, Score=142, Expect=4e-35]} {Mouse: ENSMUSG00000030987, Stim1, stromal interaction molecule 1, [Score=148, Expect=1e-36]} {Dmel: FBgn0045073, Stim, Stromal interaction molecule, [Score=110, Expect=7e-25]} {Smed: dd_Smed_v6_7756_0_1, dd_Smed_v6_7756_0_1, [Score=129, Expect=1e-30]} {RNA1509_34755} {RNA1310_6143.1, RNA1509_34755} {RNA1509_34755, RNA815_2322.1} |
| 9. | MligTC455_34197 | 156 | 3.24 | Mlig455_055430 | Neo: - Age: Down-Up-Down |
AVL9 | 0.963 | - | - | - | - | - | 0.963 | Mlig455_055430 {REF} {Length: 4958} {Pfam: Transport protein Avl9 [PF09794.11, score=422.7]; Docking domain of Afi1 for Arf3 in vesicle trafficking [PF07792.14, score=27.1]; DENN domain-containing protein 11 [PF09804.11, score=27.0]} {Human: ENSG00000105778, AVL9, AVL9 cell migration associated, [Score=245, Expect=4e-70]} {Mouse: ENSMUSG00000029787, Avl9, AVL9 cell migration associated, [Score=267, Expect=5e-78]} {Dmel: FBgn0030499, CG11178, [Score=225, Expect=1e-62]} {Celegans: WBGene00020822, T26A5.6, [Score=197, Expect=2e-54]} {Smed: dd_Smed_v6_6271_0_1, dd_Smed_v6_6271_0_1, [Score=207, Expect=2e-56]} {RNA1509_5789} {RNA1310_969.3} {RNA815_4477.1} |
| 10. | MligTC455_19382 | 51 | 1.07 | Mlig455_032372 | Neo: - Age: - Region-enriched R2: 7.387/0.00125 |
GABBR2 | 0.962 | - | - | - | - | 0.962 | - | Mlig455_032372 {REF} {Length: 3616} {Pfam: 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=166.5]; Receptor family ligand binding region [PF01094.30, score=93.5]} {Human: ENSG00000136928, GABBR2, gamma-aminobutyric acid type B receptor subunit 2, [Score=323, Expect=4e-95]} {Mouse: ENSMUSG00000039809, Gabbr2, gamma-aminobutyric acid (GABA) B receptor, 2, [Score=322, Expect=7e-95]} {Dmel: FBgn0027575, GABA-B-R2, metabotropic GABA-B receptor subtype 2, [Score=352, Expect=3e-104]} {Celegans: WBGene00022675, gbb-2, GABA B receptor subunit; GABAB2 receptor subunit, [Score=317, Expect=3e-94]} {Smed: dd_Smed_v6_59890_0_1, dd_Smed_v6_59890_0_1, [Score=159, Expect=1e-44]} {RNA1509_48457} {RNA1310_28999} {RNA815_30452} |
| 11. | MligTC455_45484 | 127 | 2.64 | Mlig455_054852 | Neo: - Age: - Region-enriched R8: 4.705/0.02905 |
DNTTIP2 | 0.961 | - | - | - | - | - | 0.961 | Mlig455_054852 {REF} {Length: 2704} {TRANSSPLICED} {Pfam: Fcf2 pre-rRNA processing [PF08698.13, score=82.8]} {Human: ENSG00000067334, DNTTIP2, deoxynucleotidyltransferase terminal interacting protein 2, [RH, Score=103, Expect=1e-24]} {Mouse: ENSMUSG00000039756, Dnttip2, deoxynucleotidyltransferase, terminal, interacting protein 2, [RH, Score=106, Expect=5e-26]} {Dmel: FBgn0037504, CG1142, [RH, Score=70.9, Expect=3e-14]} {Celegans: WBGene00021715, Y49F6B.2, [RH, Score=93.6, Expect=6e-23]} {Smed: dd_Smed_v6_10912_0_1, dd_Smed_v6_10912_0_1, [RH, Score=62.4, Expect=8e-12]} {RNA1509_18463} {RNA1310_33257, RNA1509_18463} {RNA1509_18463, RNA815_17985} |
| 12. | MligTC455_47565 | 196 | 4.08 | Mlig455_022176 | Neo: - Age: - |
GATAD1 | 0.961 | - | - | - | - | - | 0.961 | Mlig455_022176 {REF} {Length: 1469} {TRANSSPLICED} {Human: ENSG00000157259, GATAD1, GATA zinc finger domain containing 1, [Score=82.4, Expect=4e-18]} {Mouse: ENSMUSG00000007415, Gatad1, GATA zinc finger domain containing 1, [Score=80.9, Expect=1e-17]} {RNA1509_44979} {RNA1310_57214.1} {RNA815_28936} |
| 13. | MligTC455_43229 | 340 | 7.08 | Mlig455_060652 | Neo: - Age: Up-Down-Down |
NISCH | 0.96 | - | - | - | - | - | 0.960 | Mlig455_060652 {REF} {Length: 6305} {TRANSSPLICED} {Pfam: PX domain [PF00787.26, score=37.2]} {Human: ENSG00000010322, NISCH, nischarin, [Score=136, Expect=8e-33]} {Mouse: ENSMUSG00000021910, Nisch, nischarin, [Score=142, Expect=2e-36]} {Smed: dd_Smed_v6_8533_0_2, dd_Smed_v6_8533_0_2, [Score=119, Expect=5e-28]} {RNA1509_25117} {RNA1310_7689} {RNA815_3844} |
| 14. | MligTC455_26742 | 217 | 4.52 | Mlig455_024302 | Neo: - Age: Up-Down-Up |
TBC1D10B | 0.955 | - | - | - | - | - | 0.955 | Mlig455_024302 {REF} {Length: 4967} {TRANSSPLICED} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=170.2]} {Human: ENSG00000169221, TBC1D10B, TBC1 domain family member 10B, [RH, Score=291, Expect=5e-91]; ENSG00000099992, TBC1D10A, TBC1 domain family member 10A, [RH, Score=287, Expect=1e-92]} {Mouse: ENSMUSG00000042492, Tbc1d10b, TBC1 domain family, member 10b, [RH, Score=291, Expect=2e-91]; ENSMUSG00000034412, Tbc1d10a, TBC1 domain family, member 10a, [RH, Score=288, Expect=4e-93]} {Dmel: FBgn0037917, wkd, whacked, [RH, Score=303, Expect=6e-101]} {Celegans: WBGene00019915, tbc-10, TBC (Tre-2/Bub2/Cdc16) domain family, [RH, Score=264, Expect=1e-84]} {Smed: dd_Smed_v6_5522_0_2, dd_Smed_v6_5522_0_2, [RH, Score=295, Expect=2e-98]} {RNA1509_40386} {RNA1310_23976, RNA1509_40386} {RNA1509_40386, RNA815_23173} |
| 15. | MligTC455_17559 | 113 | 2.35 | Mlig455_022887 | Neo: - Age: logFC(26M/2M)=-0.413 |
0.954 | - | - | - | - | 0.954 | - | Mlig455_022887 {REF} {Length: 2777} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF13424.8, score=73.3]; Tetratricopeptide repeat [PF07719.19, score=51.2]; Tetratricopeptide repeat [PF13176.8, score=34.6]; Tetratricopeptide repeat [PF00515.30, score=29.0]; Tetratricopeptide repeat [PF13181.8, score=25.2]; Tetratricopeptide repeat [PF13428.8, score=19.6]} {RNA1509_46877, RNA1509_58896} {RNA1310_8825.1, RNA1509_46877, RNA1509_58896} {RNA1509_46877, RNA1509_58896, RNA815_1864.1} | |
| 16. | MligTC455_48132 | 13 | 0.26 | Mlig455_063178 | Neo: - Age: - |
PARP2 | 0.954 | - | - | - | 0.954 | - | - | Mlig455_063178 {REF} {Length: 2282} {TRANSSPLICED} {Pfam: Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=210.5]; Poly(ADP-ribose) polymerase, regulatory domain [PF02877.16, score=142.9]; WGR domain [PF05406.17, score=88.1]; WWE domain [PF02825.22, score=79.0]} {Human: ENSG00000129484, PARP2, poly(ADP-ribose) polymerase 2, [RH, Score=510, Expect=3e-173]} {Mouse: ENSMUSG00000036023, Parp2, poly (ADP-ribose) polymerase family, member 2, [RH, Score=525, Expect=1e-179]} {Dmel: FBgn0010247, Parp, Poly-(ADP-ribose) polymerase, [Score=325, Expect=1e-97]} {Celegans: WBGene00004049, parp-1, Poly(ADP-ribose) polymerase pme-1, [Score=304, Expect=2e-90]} {Smed: dd_Smed_v6_6154_0_8, dd_Smed_v6_6154_0_8, [RH, Score=484, Expect=4e-161]} {RNA1509_8942} {RNA1310_3564} {RNA815_7699} |
| 17. | MligTC455_10562 | 356 | 7.42 | Mlig455_023642 | Neo: - Age: - |
RRAGC | 0.953 | - | - | - | - | - | 0.953 | Mlig455_023642 {REF} {Length: 3636} {Pfam: Gtr1/RagA G protein conserved region [PF04670.14, score=210.6]; ADP-ribosylation factor family [PF00025.23, score=31.8]; Signal recognition particle receptor beta subunit [PF09439.12, score=24.0]; Elongation factor Tu GTP binding domain [PF00009.29, score=19.5]; 50S ribosome-binding GTPase [PF01926.25, score=19.2]} {Human: ENSG00000116954, RRAGC, Ras related GTP binding C, [RH, Score=409, Expect=2e-140]; ENSG00000025039, RRAGD, Ras related GTP binding D, [RH, Score=399, Expect=1e-136]} {Mouse: ENSMUSG00000028646, Rragc, Ras-related GTP binding C, [RH, Score=408, Expect=2e-140]; ENSMUSG00000028278, Rragd, Ras-related GTP binding D, [RH, Score=399, Expect=5e-137]} {Dmel: FBgn0033272, RagC-D, Ras-related GTP binding C/D, [RH, Score=400, Expect=2e-137]} {Celegans: WBGene00012497, ragc-1, RAs-related GTP binding protein C homolog, [RH, Score=283, Expect=1e-92]} {Smed: dd_Smed_v6_5653_0_1, dd_Smed_v6_5653_0_1, [RH, Score=419, Expect=2e-145]} {RNA1509_9291} {RNA1310_15858.1} {RNA815_8637} |
| 18. | MligTC455_07997 | 24 | 0.5 | Mlig455_037138 | Neo: - Age: - Region-enriched R4: 4.468/0.02777 |
0.952 | - | - | - | - | 0.952 | - | Mlig455_037138 {REF} {Length: 1966} {Pfam: Otopetrin [PF03189.15, score=32.2]} {RNA1509_57555} {RNA1310_34538} {RNA815_45658} | |
| 19. | MligTC455_21145 | 21 | 0.44 | Mlig455_027825 | Neo: - Age: - |
0.952 | - | - | - | 0.952 | - | - | Mlig455_027825 {REF} {Length: 337} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_32404} {RNA1310_72214} {RNA815_47584} | |
| 20. | MligTC455_47133 | 537 | 11.19 | Mlig455_000989, Mlig455_037599 | Neo: Int S/G2/M Age: - Regeneration-enriched R6: 2.720 |
CBX3 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_000989 {REF} {Length: 2004} {Pfam: Chromo shadow domain [PF01393.21, score=57.4]} {Human: ENSG00000122565, CBX3, chromobox 3, [Score=96.3, Expect=2e-23]; ENSG00000094916, CBX5, chromobox 5, [Score=92.4, Expect=6e-22]} {Mouse: ENSMUSG00000029836, Cbx3, chromobox 3, [Score=96.3, Expect=1e-23]; ENSMUSG00000009575, Cbx5, chromobox 5, [Score=92.0, Expect=6e-22]} {Dmel: FBgn0030082, HP1b, Heterochromatin Protein 1b, [Score=76.6, Expect=5e-16]} {Smed: dd_Smed_v6_928_0_1, dd_Smed_v6_928_0_1, [Score=86.3, Expect=7e-20]} {RNA1509_46621} {RNA1310_50589} {RNA815_44911} Mlig455_037599 {REF} {Length: 1824} {TRANSSPLICED} {Pfam: Chromo shadow domain [PF01393.21, score=57.4]} {Human: ENSG00000122565, CBX3, chromobox 3, [Score=96.3, Expect=2e-23]; ENSG00000094916, CBX5, chromobox 5, [Score=92.4, Expect=6e-22]} {Mouse: ENSMUSG00000029836, Cbx3, chromobox 3, [Score=96.3, Expect=1e-23]; ENSMUSG00000009575, Cbx5, chromobox 5, [Score=92.0, Expect=6e-22]} {Dmel: FBgn0030082, HP1b, Heterochromatin Protein 1b, [Score=76.6, Expect=5e-16]} {Smed: dd_Smed_v6_928_0_1, dd_Smed_v6_928_0_1, [Score=86.3, Expect=7e-20]} {RNA1509_46621} {RNA1310_50589, RNA1509_46621} {RNA1509_46621, RNA815_44911} |
| 21. | MligTC455_12674 | 5 | 0.1 | Mlig455_008612 | Neo: - Age: - |
0.95 | - | - | - | - | 0.950 | - | Mlig455_008612 {REF} {Length: 1724} {NoTransDecoderORF} {RNA1310_73363} {RNA815_43965} |
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