TomoSeq data search

Data search

Results for MligTC455_17796

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_17796

102

2.13

Mlig455_021185

Neo: -

Age: Up-Down-Down

GCHFR

Mlig455_021185 {REF} {Length: 731} {TRANSSPLICED} {Pfam: GTP cyclohydrolase I feedback regulatory protein (GFRP) [PF06399.15, score=116.1]} {Human: ENSG00000137880, GCHFR, GTP cyclohydrolase I feedback regulator, [RH, Score=108, Expect=5e-32]} {Mouse: ENSMUSG00000046814, Gchfr, GTP cyclohydrolase I feedback regulator, [RH, Score=106, Expect=2e-31]} {Celegans: WBGene00044736, gfrp-1, GTP cyclohydrolase I Feedback Regulatory Protein homolog, [RH, Score=90.9, Expect=2e-25]} {Smed: dd_Smed_v6_6329_0_1, dd_Smed_v6_6329_0_1, [RH, Score=92.8, Expect=2e-26]} {RNA1509_53769} {RNA1310_38628} {RNA815_28461}

Cumulative graph for MligTC455_17796

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-6.493	1.862	0.11013	0.69057
RegionR2	-0.503	1.862	0.95987	1.00000
RegionR3	-0.205	1.862	0.92485	1.00000
RegionR4	2.114	1.862	0.09213	0.29098
RegionR5	1.723	1.862	0.09250	0.28964
RegionR6	2.375	1.862	0.01236	0.19173
RegionR7	0.861	1.862	0.52386	1.00000
RegionR8	0.126	1.862	0.83810	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.599	1.862	0.99993	1.00000
RegenerationR2	1.129	1.862	0.17083	0.60999
RegenerationR3	1.16	1.862	0.25932	0.69352
RegenerationR4	-0.182	1.862	0.84562	1.00000
RegenerationR5	-0.363	1.862	0.66097	0.93644
RegenerationR6	-0.866	1.862	0.30483	0.65399
RegenerationBL	0.38	1.862	0.72869	1.00000
RegenerationTP	-0.93	1.862	0.48604	0.89264

Genes with expression patterns similar to MligTC455_17796

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_17796	102	2.13	Mlig455_021185	Neo: - Age: Up-Down-Down	GCHFR	5	-	1.000	1.000	1.000	1.000	1.000	Mlig455_021185 {REF} {Length: 731} {TRANSSPLICED} {Pfam: GTP cyclohydrolase I feedback regulatory protein (GFRP) [PF06399.15, score=116.1]} {Human: ENSG00000137880, GCHFR, GTP cyclohydrolase I feedback regulator, [RH, Score=108, Expect=5e-32]} {Mouse: ENSMUSG00000046814, Gchfr, GTP cyclohydrolase I feedback regulator, [RH, Score=106, Expect=2e-31]} {Celegans: WBGene00044736, gfrp-1, GTP cyclohydrolase I Feedback Regulatory Protein homolog, [RH, Score=90.9, Expect=2e-25]} {Smed: dd_Smed_v6_6329_0_1, dd_Smed_v6_6329_0_1, [RH, Score=92.8, Expect=2e-26]} {RNA1509_53769} {RNA1310_38628} {RNA815_28461}
2.	MligTC455_27887	63	1.32	Mlig455_005896	Neo: - Age: Down-Down-Up		0.978	-	-	-	-	0.978	-	Mlig455_005896 {REF} {Length: 2030} {TRANSSPLICED} {Pfam: AP-5 complex subunit sigma-1 [PF15001.8, score=43.7]} {RNA1509_48400} {RNA1310_26125} {RNA815_7192}
3.	MligTC455_50325	106	2.21	Mlig455_039014	Neo: - Age: Down-Up-Down		0.967	-	-	-	-	-	0.967	Mlig455_039014 {REF} {Length: 3687} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=28.4]; Ankyrin repeats (many copies) [PF13637.8, score=21.9]} {RNA1509_48933, RNA1509_5355, RNA1509_59135} {RNA1310_787.1, RNA1509_48933, RNA1509_59135} {RNA1509_48933, RNA1509_59135, RNA815_223}
4.	MligTC455_13865	71	1.47	Mlig455_054348	Neo: - Age: logFC(26M/2M)=-0.415 Region-enriched R2: 5.191/0.04459		0.965	-	-	-	-	-	0.965	Mlig455_054348 {REF} {Length: 2296} {RNA1509_33524} {RNA1310_15271} {RNA815_24673}
5.	MligTC455_49159	267	5.57	Mlig455_062353, Mlig455_062366	Neo: - Age: - Region-enriched R4: 3.582/0.01652		0.964	-	-	-	-	0.964	-	Mlig455_062353 {REF} {Length: 739} {RNA1509_34245} {RNA1310_30049} {RNA815_18326} Mlig455_062366 {REF} {Length: 807} {RNA1509_34245} {RNA1310_30049} {RNA815_18326}
6.	MligTC455_45379	454	9.46	Mlig455_053374	Neo: - Age: - Region-enriched R5: 2.043/0.00052	RGS7	0.963	-	-	-	0.963	-	-	Mlig455_053374 {REF} {Length: 3520} {TRANSSPLICED} {Pfam: Regulator of G-protein signalling DHEX domain [PF18148.3, score=116.3]; Regulator of G protein signaling domain [PF00615.21, score=95.4]; Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) [PF00610.23, score=53.0]; GGL domain [PF00631.24, score=46.1]} {Human: ENSG00000182901, RGS7, regulator of G protein signaling 7, [RH, Score=392, Expect=2e-131]; ENSG00000182732, RGS6, regulator of G protein signaling 6, [RH, Score=384, Expect=4e-128]} {Mouse: ENSMUSG00000026527, Rgs7, regulator of G protein signaling 7, [RH, Score=390, Expect=6e-131]; ENSMUSG00000021219, Rgs6, regulator of G-protein signaling 6, [RH, Score=385, Expect=1e-128]} {Dmel: FBgn0024941, RSG7, Regulator of G-protein signaling 7, [RH, Score=460, Expect=3e-156]} {Celegans: WBGene00001179, egl-10, Regulator of G-protein signaling egl-10, [RH, Score=246, Expect=9e-74]} {Smed: dd_Smed_v6_4578_0_1, dd_Smed_v6_4578_0_1, [RH, Score=296, Expect=4e-93]} {RNA1509_21995} {RNA1310_14871, RNA1509_21995} {RNA1509_21995, RNA815_14740}
7.	MligTC455_52671	11	0.23	Mlig455_014501, Mlig455_014521, Mlig455_054427	Neo: - Age: -		0.959	-	-	-	-	0.959	-	Mlig455_014501 {REF} {Length: 662} {NoTransDecoderORF} {RNA1509_45539} {RNA1310_65399} {RNA815_29511.1} Mlig455_014521 {REF} {Length: 662} {NoTransDecoderORF} {RNA1509_45539} {RNA1310_65399} {RNA815_29511.1} Mlig455_054427 {REF} {Length: 701} {NoTransDecoderORF} {RNA1509_45539} {RNA1310_65399} {RNA815_29511.1}
8.	MligTC455_28144	413	8.6	Mlig455_004583, Mlig455_014444, Mlig455_017702, Mlig455_031687, Mlig455_040527	Neo: - Age: -		0.956	-	-	-	-	-	0.956	Mlig455_004583 {REF} {Length: 1809} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1} Mlig455_014444 {REF} {Length: 2800} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1} Mlig455_017702 {REF} {Length: 1835} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1} Mlig455_031687 {REF} {Length: 2190} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1} Mlig455_040527 {REF} {Length: 2301} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1}
9.	MligTC455_06132	279	5.81	Mlig455_060518	Neo: - Age: Down-Up-Up	C7orf25	0.954	-	-	-	-	0.954	-	Mlig455_060518 {REF} {Length: 3981} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF1308) [PF07000.13, score=150.0]} {Human: ENSG00000136197, C7orf25, chromosome 7 open reading frame 25, [RH, Score=147, Expect=9e-39]} {Mouse: ENSMUSG00000039182, AW209491, expressed sequence AW209491, [RH, Score=153, Expect=3e-41]} {Dmel: FBgn0260755, CG42553, [RH, Score=129, Expect=4e-33]} {Celegans: WBGene00018015, F33G12.3, [RH, Score=82.4, Expect=8e-17]} {RNA1509_47247} {RNA1310_17270.1, RNA1509_47247} {RNA1509_47247, RNA815_20551}
10.	MligTC455_16284	1861	38.76	Mlig455_054445, Mlig455_054474	Neo: - Age: Down-Up-Down		0.954	-	-	-	0.954	-	-	Mlig455_054445 {REF} {Length: 1076} {RNA1509_29075} {RNA1310_15702.1} {RNA815_17368} Mlig455_054474 {REF} {Length: 1184} {RNA1509_29075} {RNA1310_15702.1} {RNA815_17368}

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