Data search
Results for MligTC455_16284
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_16284 | 1861 | 38.76 | Mlig455_054445, Mlig455_054474 | Neo: - Age: Down-Up-Down |
Mlig455_054445 {REF} {Length: 1076} {RNA1509_29075} {RNA1310_15702.1} {RNA815_17368} Mlig455_054474 {REF} {Length: 1184} {RNA1509_29075} {RNA1310_15702.1} {RNA815_17368} |
Cumulative graph for MligTC455_16284
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.672 | 5.422 | 0.02277 | 0.40788 | |
| RegionR2 | 0.602 | 5.422 | 0.06520 | 0.30942 | |
| RegionR3 | 0.767 | 5.422 | 0.00317 | 0.06977 | |
| RegionR4 | -0.211 | 5.422 | 0.48712 | 0.81457 | |
| RegionR5 | 0.444 | 5.422 | 0.07418 | 0.24816 | |
| RegionR6 | 0.603 | 5.422 | 0.02614 | 0.29607 | |
| RegionR7 | -0.228 | 5.422 | 0.51532 | 1.00000 | |
| RegionR8 | -0.304 | 5.422 | 0.47457 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.073 | 5.422 | 0.94910 | 1.00000 | |
| RegenerationR2 | 0.068 | 5.422 | 0.80632 | 0.99184 | |
| RegenerationR3 | -0.475 | 5.422 | 0.11437 | 0.52801 | |
| RegenerationR4 | 0.002 | 5.422 | 0.99397 | 1.00000 | |
| RegenerationR5 | -0.2 | 5.422 | 0.48905 | 0.85174 | |
| RegenerationR6 | -0.889 | 5.422 | 0.00507 | 0.08614 | |
| RegenerationBL | -0.22 | 5.422 | 0.53208 | 0.89198 | |
| RegenerationTP | 0.839 | 5.422 | 0.02052 | 0.24567 |
Genes with expression patterns similar to MligTC455_16284
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_16284 | 1861 | 38.76 | Mlig455_054445, Mlig455_054474 | Neo: - Age: Down-Up-Down |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_054445 {REF} {Length: 1076} {RNA1509_29075} {RNA1310_15702.1} {RNA815_17368} Mlig455_054474 {REF} {Length: 1184} {RNA1509_29075} {RNA1310_15702.1} {RNA815_17368} |
|
| 2. | MligTC455_25017 | 1155 | 24.07 | Mlig455_068054 | Neo: - |
TRIM6 | 2.72 | 0.903 | - | - | - | 0.864 | 0.953 | Mlig455_068054 {REF} {Length: 2760} {Pfam: RING-type zinc-finger [PF13445.8, score=39.1]; zinc finger of C3HC4-type, RING [PF15227.8, score=33.4]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=28.1]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=28.0]; NHL repeat [PF01436.23, score=25.5]; Ring finger domain [PF13639.8, score=20.3]; Exonuclease VII, large subunit [PF02601.17, score=19.9]; zinc-RING finger domain [PF14634.8, score=19.3]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=19.1]} {Human: ENSG00000121236, TRIM6, tripartite motif containing 6, [RH, Score=64.3, Expect=3e-10]; ENSG00000258588, TRIM6-TRIM34, TRIM6-TRIM34 readthrough, [RH, Score=62.8, Expect=1e-09]} {Mouse: ENSMUSG00000072244, Trim6, tripartite motif-containing 6, [RH, Score=57.0, Expect=4e-08]} {Celegans: WBGene00003597, nhl-1, RING finger protein nhl-1, [Score=48.9, Expect=9e-06]} {RNA1509_9450} {RNA1310_3683.1} {RNA815_2165} |
| 3. | MligTC455_23937 | 107 | 2.23 | Mlig455_044625 | Neo: - Age: - |
TRPM3 | 1.726 | 0.953 | - | - | - | 0.773 | - | Mlig455_044625 {REF} {Length: 5687} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=80.1]; Ankyrin repeats (3 copies) [PF12796.9, score=74.7]; Ankyrin repeat [PF13606.8, score=59.8]; Ion transport protein [PF00520.33, score=56.9]; Ankyrin repeat [PF00023.32, score=50.8]; Ankyrin repeats (many copies) [PF13857.8, score=38.8]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=139, Expect=1e-32]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=135, Expect=4e-31]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=135, Expect=4e-31]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=142, Expect=2e-33]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=136, Expect=1e-31]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=111, Expect=4e-24]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=112, Expect=2e-24]} {Smed: dd_Smed_v6_8382_0_1, dd_Smed_v6_8382_0_1, [Score=188, Expect=2e-48]} {RNA1509_32799} {RNA1310_1742.1} {RNA815_1771} |
| 4. | MligTC455_41488 | 418 | 8.71 | Mlig455_000083 | Neo: - Age: Down-Up-Down Region-enriched R2: 1.872/0.00814 |
SLC18A3 | 0.963 | 0.963 | - | - | - | - | - | Mlig455_000083 {REF} {Length: 1974} {Pfam: Major Facilitator Superfamily [PF07690.18, score=95.9]; MFS_1 like family [PF12832.9, score=26.9]} {Human: ENSG00000187714, SLC18A3, solute carrier family 18 member A3, [Score=103, Expect=5e-23]; ENSG00000036565, SLC18A1, solute carrier family 18 member A1, [Score=99.4, Expect=1e-21]} {Mouse: ENSMUSG00000100241, Slc18a3, solute carrier family 18 (vesicular monoamine), member 3, [Score=107, Expect=3e-24]} {Dmel: FBgn0270928, VAChT, Vesicular acetylcholine transporter, [Score=199, Expect=1e-56]} {Celegans: WBGene00006756, unc-17, Vesicular acetylcholine transporter unc-17, [Score=182, Expect=7e-51]} {Smed: dd_Smed_v6_11630_0_1, dd_Smed_v6_11630_0_1, [Score=187, Expect=7e-53]} {RNA1509_37669} {RNA1310_14899.1} {RNA815_15265} |
| 5. | MligTC455_50790 | 272 | 5.67 | Mlig455_032966, Mlig455_041856 | Neo: - Age: - |
GTF2E2 | 0.963 | - | - | - | - | 0.963 | - | Mlig455_032966 {REF} {Length: 1725} {TRANSSPLICED} {Pfam: TFIIE beta subunit core domain [PF02186.17, score=48.6]; TFA2 Winged helix domain 2 [PF18121.3, score=21.0]} {Human: ENSG00000197265, GTF2E2, general transcription factor IIE subunit 2, [RH, Score=166, Expect=4e-49]} {Mouse: ENSMUSG00000031585, Gtf2e2, general transcription factor II E, polypeptide 2 (beta subunit), [RH, Score=160, Expect=2e-47]} {Dmel: FBgn0015829, TfIIEbeta, Transcription factor IIEbeta, [RH, Score=152, Expect=3e-44]} {Celegans: WBGene00010054, F54D5.11, Transcription initiation factor IIE subunit beta, [RH, Score=115, Expect=3e-30]} {Smed: dd_Smed_v6_3857_0_1, dd_Smed_v6_3857_0_1, [RH, Score=111, Expect=8e-29]} {RNA1509_23345, RNA1509_54525} {RNA1310_29920, RNA1509_23345, RNA1509_54525} {RNA1509_23345, RNA1509_54525, RNA815_14347.1} Mlig455_041856 {REF} {Length: 1722} {TRANSSPLICED} {Pfam: TFIIE beta subunit core domain [PF02186.17, score=48.6]; TFA2 Winged helix domain 2 [PF18121.3, score=21.0]} {Human: ENSG00000197265, GTF2E2, general transcription factor IIE subunit 2, [RH, Score=166, Expect=4e-49]} {Mouse: ENSMUSG00000031585, Gtf2e2, general transcription factor II E, polypeptide 2 (beta subunit), [RH, Score=160, Expect=2e-47]} {Dmel: FBgn0015829, TfIIEbeta, Transcription factor IIEbeta, [RH, Score=152, Expect=3e-44]} {Celegans: WBGene00010054, F54D5.11, Transcription initiation factor IIE subunit beta, [RH, Score=115, Expect=3e-30]} {Smed: dd_Smed_v6_3857_0_1, dd_Smed_v6_3857_0_1, [RH, Score=111, Expect=8e-29]} {RNA1509_23345} {RNA1310_29920} {RNA815_14347.1} |
| 6. | MligTC455_50928 | 1465 | 30.53 | Mlig455_048165 | Neo: - Age: - |
MARCH5 | 0.962 | - | - | - | - | - | 0.962 | Mlig455_048165 {REF} {Length: 2347} {TRANSSPLICED} {Pfam: RING-variant domain [PF12906.9, score=46.7]} {Human: ENSG00000198060, MARCH5, membrane associated ring-CH-type finger 5, [RH, Score=294, Expect=1e-99]} {Mouse: ENSMUSG00000111123, March5, membrane-associated ring finger (C3HC4) 5, [RH, Score=294, Expect=9e-100]; ENSMUSG00000023307, March5, membrane-associated ring finger (C3HC4) 5, [RH, Score=294, Expect=9e-100]} {Dmel: FBgn0037242, CG9855, [RH, Score=267, Expect=9e-88]} {Celegans: WBGene00010913, M110.3, [RH, Score=45.4, Expect=9e-06]} {Smed: dd_Smed_v6_4602_0_1, dd_Smed_v6_4602_0_1, [RH, Score=257, Expect=3e-85]} {RNA1509_13617, RNA1509_16278, RNA1509_19987, RNA1509_25398, RNA1509_26839, RNA1509_35549} {RNA1310_1837.3, RNA1509_13617, RNA1509_16278, RNA1509_19987, RNA1509_25398, RNA1509_26839, RNA1509_35549} {RNA1509_13617, RNA1509_16278, RNA1509_19987, RNA1509_25398, RNA1509_26839, RNA1509_35549, RNA815_13330} |
| 7. | MligTC455_39435 | 360 | 7.5 | Mlig455_028999 | Neo: Irradiation Age: - |
0.959 | - | - | - | - | 0.959 | - | Mlig455_028999 {REF} {Length: 3461} {Pfam: Methyltransferase FkbM domain [PF05050.14, score=23.6]} {Smed: dd_Smed_v6_12148_0_3, dd_Smed_v6_12148_0_3, [Score=73.2, Expect=6e-15]} {RNA1509_33209} {RNA1310_25936} {RNA815_11313} | |
| 8. | MligTC455_53955 | 385 | 8.01 | Mlig455_016192 | Neo: - Age: - Region-enriched R2: 2.185/0.00203 |
TMEM216 | 0.958 | 0.958 | - | - | - | - | - | Mlig455_016192 {REF} {Length: 1165} {TRANSSPLICED} {Pfam: Predicted membrane protein [PF09799.11, score=85.0]} {Human: ENSG00000187049, TMEM216, transmembrane protein 216, [RH, Score=61.2, Expect=7e-12]} {Mouse: ENSMUSG00000024667, Tmem216, transmembrane protein 216, [RH, Score=63.9, Expect=3e-13]} {Dmel: FBgn0037615, CG11760, [RH, Score=63.2, Expect=6e-13]} {Smed: dd_Smed_v6_14636_0_1, dd_Smed_v6_14636_0_1, [RH, Score=82.4, Expect=1e-20]} {RNA1509_39699, RNA1509_53860} {RNA1310_30237, RNA1509_39699, RNA1509_53860} {RNA1509_39699, RNA1509_53860, RNA815_653} |
| 9. | MligTC455_17796 | 102 | 2.13 | Mlig455_021185 | Neo: - Age: Up-Down-Down |
GCHFR | 0.954 | - | - | - | 0.954 | - | - | Mlig455_021185 {REF} {Length: 731} {TRANSSPLICED} {Pfam: GTP cyclohydrolase I feedback regulatory protein (GFRP) [PF06399.15, score=116.1]} {Human: ENSG00000137880, GCHFR, GTP cyclohydrolase I feedback regulator, [RH, Score=108, Expect=5e-32]} {Mouse: ENSMUSG00000046814, Gchfr, GTP cyclohydrolase I feedback regulator, [RH, Score=106, Expect=2e-31]} {Celegans: WBGene00044736, gfrp-1, GTP cyclohydrolase I Feedback Regulatory Protein homolog, [RH, Score=90.9, Expect=2e-25]} {Smed: dd_Smed_v6_6329_0_1, dd_Smed_v6_6329_0_1, [RH, Score=92.8, Expect=2e-26]} {RNA1509_53769} {RNA1310_38628} {RNA815_28461} |
| 10. | MligTC455_23841 | 395 | 8.22 | Mlig455_022917 | Neo: - Age: Down-Up-Down |
0.954 | 0.954 | - | - | - | - | - | Mlig455_022917 {REF} {Length: 3298} {Pfam: Zn-finger in Ran binding protein and others [PF00641.20, score=26.8]} {RNA1509_28157, RNA1509_38511} {RNA1310_26466.1, RNA1509_38511} {RNA1509_38511, RNA815_11381} | |
| 11. | MligTC455_23840 | 421 | 8.78 | Mlig455_022906 | Neo: - Age: - |
0.953 | 0.953 | - | - | - | - | - | Mlig455_022906 {REF} {Length: 4155} {TRANSSPLICED} {Pfam: Zn-finger in Ran binding protein and others [PF00641.20, score=26.8]} {RNA1509_28157, RNA1509_53765} {RNA1310_21290.1, RNA1509_28157, RNA1509_53765} {RNA1509_28157, RNA1509_53765, RNA815_11133} | |
| 12. | MligTC455_23938 | 109 | 2.26 | Mlig455_044682 | Neo: - Age: logFC(26M/2M)=0.355 |
TRPM3 | 0.953 | 0.953 | - | - | - | - | - | Mlig455_044682 {REF} {Length: 6333} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=80.4]; Ankyrin repeats (3 copies) [PF12796.9, score=74.8]; Ankyrin repeat [PF13606.8, score=59.5]; Ion transport protein [PF00520.33, score=57.5]; Ankyrin repeat [PF00023.32, score=51.1]; Ankyrin repeats (many copies) [PF13857.8, score=38.9]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=139, Expect=2e-32]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=139, Expect=2e-32]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=139, Expect=2e-32]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=141, Expect=3e-33]; ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=140, Expect=4e-33]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=112, Expect=2e-24]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=111, Expect=2e-24]} {Smed: dd_Smed_v6_8382_0_1, dd_Smed_v6_8382_0_1, [Score=192, Expect=2e-49]} {RNA1509_19611, RNA1509_32799} {RNA1310_1742.1, RNA1509_19611, RNA1509_32799} {RNA1509_19611, RNA1509_32799, RNA815_1771} |
| 13. | MligTC455_45725 | 1233 | 25.68 | Mlig455_045888 | Neo: - Age: - |
CASP3 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_045888 {REF} {Length: 2540} {TRANSSPLICED} {Pfam: Caspase domain [PF00656.24, score=103.2]} {Human: ENSG00000164305, CASP3, caspase 3, [Score=132, Expect=3e-34]} {Mouse: ENSMUSG00000031628, Casp3, caspase 3, [Score=124, Expect=1e-31]} {Dmel: FBgn0026404, Dronc, Death regulator Nedd2-like caspase, [Score=94.4, Expect=3e-20]} {Celegans: WBGene00000819, csp-1, Caspase A Caspase A subunit p16 Caspase A subunit p14, [Score=106, Expect=2e-25]} {Smed: dd_Smed_v6_3121_1_1, dd_Smed_v6_3121_1_1, [Score=124, Expect=3e-32]} {RNA1509_9705} {RNA1310_1479.1, RNA1509_9705} {RNA1509_9705, RNA815_3115.1} |
| 14. | MligTC455_37520 | 468 | 9.75 | Mlig455_067442 | Neo: - Age: Up-Down-Down |
PAXIP1 | 0.951 | 0.951 | - | - | - | - | - | Mlig455_067442 {REF} {Length: 6041} {Pfam: BRCA1 C Terminus (BRCT) domain [PF00533.28, score=112.3]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=94.4]; twin BRCT domain [PF12738.9, score=79.2]; DNA ligase 3 BRCT domain [PF16759.7, score=34.1]; Regulator of Ty1 transposition protein 107 BRCT domain [PF16770.7, score=29.9]; BRCA1 C Terminus (BRCT) domain [PF18428.3, score=27.0]} {Human: ENSG00000157212, PAXIP1, PAX interacting protein 1, [RH, Score=96.7, Expect=3e-19]} {Mouse: ENSMUSG00000002221, Paxip1, PAX interacting (with transcription-activation domain) protein 1, [Score=94.0, Expect=1e-18]} {Dmel: FBgn0052133, Ptip, PAX transcription activation domain interacting protein, [RH, Score=139, Expect=1e-32]} {Celegans: WBGene00004031, pis-1, PIS (Pax-2, IA-1/6, Smad-2 interacting protein) homolog, [RH, Score=119, Expect=8e-27]} {Smed: dd_Smed_v6_5269_0_1, dd_Smed_v6_5269_0_1, [RH, Score=238, Expect=5e-64]} {RNA1509_6159} {RNA1310_800.1, RNA1509_6159} {RNA1509_6159, RNA815_1449} |
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