Data search
Results for MligTC455_17873
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_17873 | 15 | 0.31 | Mlig455_009883 | Neo: - Age: - |
Mlig455_009883 {REF} {Length: 261} {NoTransDecoderORF} {RNA1310_66137} |
Cumulative graph for MligTC455_17873
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -4.41 | 0.763 | 0.99974 | 1.00000 | |
| RegionR2 | 2.211 | 0.763 | 0.47735 | 0.86201 | |
| RegionR3 | 1.971 | 0.763 | 0.36324 | 0.89886 | |
| RegionR4 | 1.167 | 0.763 | 0.45109 | 0.78004 | |
| RegionR5 | 1.775 | 0.763 | 0.31809 | 0.65884 | |
| RegionR6 | -0.248 | 0.763 | 0.57542 | 1.00000 | |
| RegionR7 | 0.738 | 0.763 | 0.81503 | 1.00000 | |
| RegionR8 | -3.204 | 0.763 | 0.99936 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.216 | 0.763 | 0.99988 | 1.00000 | |
| RegenerationR2 | -3.963 | 0.763 | 0.20870 | 0.65615 | |
| RegenerationR3 | -3.5 | 0.763 | 0.26906 | 0.70328 | |
| RegenerationR4 | -0.989 | 0.763 | 0.94355 | 1.00000 | |
| RegenerationR5 | -1.955 | 0.763 | 0.60443 | 0.91199 | |
| RegenerationR6 | -1.679 | 0.763 | 0.39067 | 0.73022 | |
| RegenerationBL | -1.597 | 0.763 | 0.99970 | 1.00000 | |
| RegenerationTP | -1.247 | 0.763 | 0.99979 | 1.00000 |
Genes with expression patterns similar to MligTC455_17873
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_17873 | 15 | 0.31 | Mlig455_009883 | Neo: - Age: - |
2 | - | 1.000 | 1.000 | - | - | - | Mlig455_009883 {REF} {Length: 261} {NoTransDecoderORF} {RNA1310_66137} | |
| 2. | MligTC455_45206 | 17 | 0.35 | Mlig455_058664 | Neo: Germline Age: - Regeneration-downregulated R4: -6.232 Regeneration-depleted R4: -6.232 |
0.978 | - | - | 0.978 | - | - | - | Mlig455_058664 {REF} {Length: 1283} {RNA1509_48085} {RNA1310_40804} {RNA815_27336} | |
| 3. | MligTC455_39367 | 26 | 0.54 | Mlig455_048186 | Neo: - Age: - |
0.968 | - | - | 0.968 | - | - | - | Mlig455_048186 {REF} {Length: 2448} {TRANSSPLICED} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=26.8]} {RNA1509_15614} {RNA1310_52319.1} {RNA815_17448} | |
| 4. | MligTC455_28992 | 248 | 5.17 | Mlig455_007574 | Neo: - Age: - Region-enriched R3: 5.359/0.00013 |
SIX1 | 0.967 | - | - | 0.967 | - | - | - | Mlig455_007574 {REF} {Length: 2756} {Pfam: Transcriptional regulator, SIX1, N-terminal SD domain [PF16878.7, score=146.3]; Homeodomain [PF00046.31, score=56.2]; Homeobox KN domain [PF05920.13, score=49.9]} {Human: ENSG00000126778, SIX1, SIX homeobox 1, [Score=313, Expect=9e-104]; ENSG00000170577, SIX2, SIX homeobox 2, [Score=307, Expect=3e-101]} {Mouse: ENSMUSG00000051367, Six1, sine oculis-related homeobox 1, [Score=313, Expect=5e-104]; ENSMUSG00000024134, Six2, sine oculis-related homeobox 2, [Score=308, Expect=1e-101]} {Dmel: FBgn0003460, so, sine oculis, [Score=303, Expect=3e-98]} {Celegans: WBGene00000454, ceh-33, Homeobox protein ceh-33, [RH, Score=246, Expect=2e-78]} {Smed: dd_Smed_v6_15436_0_1, dd_Smed_v6_15436_0_1, [RH, Score=326, Expect=2e-106]} {RNA1509_55511} {RNA1310_27700, RNA1509_55511} {RNA1509_55511, RNA815_16067} |
| 5. | MligTC455_10000 | 22 | 0.45 | Mlig455_018215, Mlig455_018222, Mlig455_024893 | Neo: - Age: - |
NYNRIN | 0.953 | - | - | 0.953 | - | - | - | Mlig455_018215 {REF} {Length: 1346} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=50.6]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=115, Expect=9e-28]} {RNA1509_37150} {RNA1310_27350} {RNA815_53271} Mlig455_018222 {REF} {Length: 2972} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=111.2]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=93.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=78.7]; Integrase zinc binding domain [PF17921.3, score=48.7]; Integrase core domain [PF00665.28, score=44.0]; H2C2 zinc finger [PF09337.12, score=18.8]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=67.0, Expect=2e-10]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=60.8, Expect=9e-09]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=333, Expect=2e-98]} {RNA1509_24311} {RNA1310_27350} {RNA815_49943} Mlig455_024893 {REF} {Length: 1453} {Smed: dd_Smed_v6_15720_0_1, dd_Smed_v6_15720_0_1, [Score=44.7, Expect=1e-06]} {RNA1310_25709} {RNA815_53271} |
| 6. | MligTC455_12100 | 95 | 1.97 | Mlig455_029365 | Neo: - Age: Down-Up-Down Region-enriched R3: 3.875/0.00267 |
0.953 | - | - | 0.953 | - | - | - | Mlig455_029365 {REF} {Length: 1265} {RNA1509_49846} {RNA1310_39189, RNA1509_49846} {RNA1509_49846, RNA815_32261} | |
| 7. | MligTC455_16575 | 52 | 1.07 | Mlig455_005832 | Neo: - Age: - |
0.953 | - | - | 0.953 | - | - | - | Mlig455_005832 {REF} {Length: 1785} {TRANSSPLICED} {RNA1509_56064} {RNA1310_27244} {RNA815_26294} | |
| 8. | MligTC455_07322 | 15 | 0.32 | Mlig455_015072 | Neo: - Age: - |
0.952 | - | - | 0.952 | - | - | - | Mlig455_015072 {REF} {Length: 1524} {RNA1509_58516} {RNA1310_95465} {RNA815_5756} | |
| 9. | MligTC455_09432 | 22 | 0.46 | Mlig455_019395 | Neo: - Age: Up-Down-Up |
GRIK4 | 0.952 | - | - | 0.952 | - | - | - | Mlig455_019395 {REF} {Length: 2144} {Pfam: Ligand-gated ion channel [PF00060.28, score=23.4]} {Human: ENSG00000149403, GRIK4, glutamate ionotropic receptor kainate type subunit 4, [Score=57.0, Expect=5e-09]} {Mouse: ENSMUSG00000032017, Grik4, glutamate receptor, ionotropic, kainate 4, [Score=57.4, Expect=2e-09]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=54.7, Expect=2e-08]} {Dmel: FBgn0039927, CG11155, [Score=58.2, Expect=1e-09]} {Smed: dd_Smed_v6_21015_0_2, dd_Smed_v6_21015_0_2, [Score=97.1, Expect=5e-24]} {RNA1509_10728} {RNA1310_6710} {RNA815_12426} |