Data search
Results for MligTC455_45206
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_45206 | 17 | 0.35 | Mlig455_058664 | Neo: Germline Age: - Regeneration-downregulated R4: -6.232 Regeneration-depleted R4: -6.232 |
Mlig455_058664 {REF} {Length: 1283} {RNA1509_48085} {RNA1310_40804} {RNA815_27336} |
Cumulative graph for MligTC455_45206
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 2.33 | 0.874 | 0.99964 | 1.00000 | |
| RegionR2 | 0.526 | 0.874 | 0.60209 | 0.95228 | |
| RegionR3 | 1.052 | 0.874 | 0.31235 | 0.85165 | |
| RegionR4 | 5.693 | 0.874 | 0.01998 | 0.10208 | |
| RegionR5 | 0.092 | 0.874 | 0.54613 | 0.90806 | |
| RegionR6 | -3.483 | 0.874 | 0.99968 | 1.00000 | |
| RegionR7 | -3.08 | 0.874 | 0.99967 | 1.00000 | |
| RegionR8 | -3.131 | 0.874 | 0.99968 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -2.487 | 0.874 | 0.99994 | 1.00000 | |
| RegenerationR2 | -3.387 | 0.874 | 0.01460 | 0.19786 | |
| RegenerationR3 | -4.352 | 0.874 | 0.00147 | 0.06287 | |
| RegenerationR4 | -6.232 | 0.874 | 0.00001 | 0.00129 | Specific for R4: -6.232 |
| RegenerationR5 | -2.939 | 0.874 | 0.01914 | 0.23946 | |
| RegenerationR6 | 0.226 | 0.874 | 0.99999 | 1.00000 | |
| RegenerationBL | 1.033 | 0.874 | 0.99995 | 1.00000 | |
| RegenerationTP | -0.965 | 0.874 | 0.99993 | 1.00000 |
Genes with expression patterns similar to MligTC455_45206
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_45206 | 17 | 0.35 | Mlig455_058664 | Neo: Germline Age: - Regeneration-downregulated R4: -6.232 Regeneration-depleted R4: -6.232 |
2 | 1.000 | - | 1.000 | - | - | - | Mlig455_058664 {REF} {Length: 1283} {RNA1509_48085} {RNA1310_40804} {RNA815_27336} | |
| 2. | MligTC455_17873 | 15 | 0.31 | Mlig455_009883 | Neo: - Age: - |
0.978 | - | - | 0.978 | - | - | - | Mlig455_009883 {REF} {Length: 261} {NoTransDecoderORF} {RNA1310_66137} | |
| 3. | MligTC455_12100 | 95 | 1.97 | Mlig455_029365 | Neo: - Age: Down-Up-Down Region-enriched R3: 3.875/0.00267 |
0.973 | - | - | 0.973 | - | - | - | Mlig455_029365 {REF} {Length: 1265} {RNA1509_49846} {RNA1310_39189, RNA1509_49846} {RNA1509_49846, RNA815_32261} | |
| 4. | MligTC455_16575 | 52 | 1.07 | Mlig455_005832 | Neo: - Age: - |
0.973 | - | - | 0.973 | - | - | - | Mlig455_005832 {REF} {Length: 1785} {TRANSSPLICED} {RNA1509_56064} {RNA1310_27244} {RNA815_26294} | |
| 5. | MligTC455_10000 | 22 | 0.45 | Mlig455_018215, Mlig455_018222, Mlig455_024893 | Neo: - Age: - |
NYNRIN | 0.968 | - | - | 0.968 | - | - | - | Mlig455_018215 {REF} {Length: 1346} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=50.6]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=115, Expect=9e-28]} {RNA1509_37150} {RNA1310_27350} {RNA815_53271} Mlig455_018222 {REF} {Length: 2972} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=111.2]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=93.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=78.7]; Integrase zinc binding domain [PF17921.3, score=48.7]; Integrase core domain [PF00665.28, score=44.0]; H2C2 zinc finger [PF09337.12, score=18.8]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=67.0, Expect=2e-10]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=60.8, Expect=9e-09]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=333, Expect=2e-98]} {RNA1509_24311} {RNA1310_27350} {RNA815_49943} Mlig455_024893 {REF} {Length: 1453} {Smed: dd_Smed_v6_15720_0_1, dd_Smed_v6_15720_0_1, [Score=44.7, Expect=1e-06]} {RNA1310_25709} {RNA815_53271} |
| 6. | MligTC455_07322 | 15 | 0.32 | Mlig455_015072 | Neo: - Age: - |
0.96 | - | - | 0.960 | - | - | - | Mlig455_015072 {REF} {Length: 1524} {RNA1509_58516} {RNA1310_95465} {RNA815_5756} | |
| 7. | MligTC455_09432 | 22 | 0.46 | Mlig455_019395 | Neo: - Age: Up-Down-Up |
GRIK4 | 0.959 | - | - | 0.959 | - | - | - | Mlig455_019395 {REF} {Length: 2144} {Pfam: Ligand-gated ion channel [PF00060.28, score=23.4]} {Human: ENSG00000149403, GRIK4, glutamate ionotropic receptor kainate type subunit 4, [Score=57.0, Expect=5e-09]} {Mouse: ENSMUSG00000032017, Grik4, glutamate receptor, ionotropic, kainate 4, [Score=57.4, Expect=2e-09]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=54.7, Expect=2e-08]} {Dmel: FBgn0039927, CG11155, [Score=58.2, Expect=1e-09]} {Smed: dd_Smed_v6_21015_0_2, dd_Smed_v6_21015_0_2, [Score=97.1, Expect=5e-24]} {RNA1509_10728} {RNA1310_6710} {RNA815_12426} |
| 8. | MligTC455_11632 | 18 | 0.38 | Mlig455_064774 | Neo: - Age: - |
CFAP126 | 0.958 | - | - | 0.958 | - | - | - | Mlig455_064774 {REF} {Length: 2533} {Human: ENSG00000188931, CFAP126, cilia and flagella associated protein 126, [Score=59.7, Expect=5e-10]} {Mouse: ENSMUSG00000026649, Cfap126, cilia and flagella associated protein 126, [Score=63.2, Expect=3e-11]} {RNA1310_44557.2} {RNA815_31853} |
| 9. | MligTC455_20041 | 51 | 1.06 | Mlig455_040193 | Neo: - Age: - |
0.953 | - | - | 0.953 | - | - | - | Mlig455_040193 {REF} {Length: 2188} {NoTransDecoderORF} {RNA1509_59933} {RNA1310_67825, RNA1509_59933} {RNA1509_59933, RNA815_42094} | |
| 10. | MligTC455_07393 | 66 | 1.37 | Mlig455_006210 | Neo: - Age: - |
0.951 | - | - | 0.951 | - | - | - | Mlig455_006210 {REF} {Length: 804} {NoTransDecoderORF} {RNA1310_52033} | |
| 11. | MligTC455_07394 | 59 | 1.22 | Mlig455_057223 | Neo: Int S/G2/M Age: - |
0.951 | - | - | 0.951 | - | - | - | Mlig455_057223 {REF} {Length: 738} {NoTransDecoderORF} {RNA1310_52033} |