TomoSeq data search

Data search

Results for MligTC455_18093

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_18093

42

0.87

Mlig455_056859

Neo: -

Age: -

ARL3

Mlig455_056859 {REF} {Length: 1943} {Pfam: ADP-ribosylation factor family [PF00025.23, score=67.8]; 50S ribosome-binding GTPase [PF01926.25, score=26.5]; G-protein alpha subunit [PF00503.22, score=18.9]} {Human: ENSG00000138175, ARL3, ADP ribosylation factor like GTPase 3, [Score=67.8, Expect=2e-13]; ENSG00000122644, ARL4A, ADP ribosylation factor like GTPase 4A, [Score=67.8, Expect=3e-13]; ENSG00000143761, ARF1, ADP ribosylation factor 1, [Score=65.5, Expect=1e-12]; ENSG00000134287, ARF3, ADP ribosylation factor 3, [Score=65.1, Expect=2e-12]; ENSG00000168374, ARF4, ADP ribosylation factor 4, [Score=65.1, Expect=2e-12]; ENSG00000188042, ARL4C, ADP ribosylation factor like GTPase 4C, [Score=64.7, Expect=4e-12]} {Mouse: ENSMUSG00000047446, Arl4a, ADP-ribosylation factor-like 4A, [Score=67.4, Expect=2e-13]; ENSMUSG00000025035, Arl3, ADP-ribosylation factor-like 3, [Score=66.6, Expect=4e-13]; ENSMUSG00000048076, Arf1, ADP-ribosylation factor 1, [Score=65.5, Expect=1e-12]; ENSMUSG00000051853, Arf3, ADP-ribosylation factor 3, [Score=65.1, Expect=1e-12]; ENSMUSG00000049866, Arl4c, ADP-ribosylation factor-like 4C, [Score=64.3, Expect=3e-12]} {Dmel: FBgn0013749, Arf102F, ADP ribosylation factor at 102F, [Score=66.6, Expect=3e-13]} {Celegans: WBGene00000184, arf-6, ADP-Ribosylation Factor related, [Score=65.5, Expect=5e-13]} {Smed: dd_Smed_v6_2013_0_1, dd_Smed_v6_2013_0_1, [Score=78.6, Expect=7e-18]} {RNA1310_41790} {RNA815_35492}

Cumulative graph for MligTC455_18093

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.5	1.152	0.99965	1.00000
RegionR2	4.105	1.152	0.01829	0.14465
RegionR3	1.699	1.152	0.22333	0.76479
RegionR4	1.419	1.152	0.23569	0.52997
RegionR5	-0.6	1.152	0.99973	1.00000
RegionR6	1.819	1.152	0.20553	0.78005
RegionR7	-2.224	1.152	0.99977	1.00000
RegionR8	-2.716	1.152	0.99974	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.554	1.152	1.00000	1.00000
RegenerationR2	-1.738	1.152	0.08266	0.46264
RegenerationR3	-0.261	1.152	0.87179	1.00000
RegenerationR4	-0.613	1.152	0.78252	0.98180
RegenerationR5	0.752	1.152	0.29939	0.72635
RegenerationR6	-0.687	1.152	0.71629	0.93321
RegenerationBL	2.991	1.152	0.16510	0.48756
RegenerationTP	2.718	1.152	0.31820	0.76348

Genes with expression patterns similar to MligTC455_18093

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_18093	42	0.87	Mlig455_056859	Neo: - Age: -	ARL3	3	-	-	1.000	1.000	1.000	-	Mlig455_056859 {REF} {Length: 1943} {Pfam: ADP-ribosylation factor family [PF00025.23, score=67.8]; 50S ribosome-binding GTPase [PF01926.25, score=26.5]; G-protein alpha subunit [PF00503.22, score=18.9]} {Human: ENSG00000138175, ARL3, ADP ribosylation factor like GTPase 3, [Score=67.8, Expect=2e-13]; ENSG00000122644, ARL4A, ADP ribosylation factor like GTPase 4A, [Score=67.8, Expect=3e-13]; ENSG00000143761, ARF1, ADP ribosylation factor 1, [Score=65.5, Expect=1e-12]; ENSG00000134287, ARF3, ADP ribosylation factor 3, [Score=65.1, Expect=2e-12]; ENSG00000168374, ARF4, ADP ribosylation factor 4, [Score=65.1, Expect=2e-12]; ENSG00000188042, ARL4C, ADP ribosylation factor like GTPase 4C, [Score=64.7, Expect=4e-12]} {Mouse: ENSMUSG00000047446, Arl4a, ADP-ribosylation factor-like 4A, [Score=67.4, Expect=2e-13]; ENSMUSG00000025035, Arl3, ADP-ribosylation factor-like 3, [Score=66.6, Expect=4e-13]; ENSMUSG00000048076, Arf1, ADP-ribosylation factor 1, [Score=65.5, Expect=1e-12]; ENSMUSG00000051853, Arf3, ADP-ribosylation factor 3, [Score=65.1, Expect=1e-12]; ENSMUSG00000049866, Arl4c, ADP-ribosylation factor-like 4C, [Score=64.3, Expect=3e-12]} {Dmel: FBgn0013749, Arf102F, ADP ribosylation factor at 102F, [Score=66.6, Expect=3e-13]} {Celegans: WBGene00000184, arf-6, ADP-Ribosylation Factor related, [Score=65.5, Expect=5e-13]} {Smed: dd_Smed_v6_2013_0_1, dd_Smed_v6_2013_0_1, [Score=78.6, Expect=7e-18]} {RNA1310_41790} {RNA815_35492}
2.	MligTC455_37458	120	2.49	Mlig455_037280, Mlig455_042333, Mlig455_055120	Neo: - Age: -	CUBN	1.754	-	-	0.958	-	0.796	-	Mlig455_037280 {REF} {Length: 3846} {Pfam: CUB domain [PF00431.22, score=68.6]} {Human: ENSG00000107611, CUBN, cubilin, [Score=56.6, Expect=3e-08]; ENSG00000157211, CDCP2, CUB domain containing protein 2, [Score=55.5, Expect=5e-08]} {Mouse: ENSMUSG00000022098, Bmp1, bone morphogenetic protein 1, [Score=55.5, Expect=6e-08]} {Dmel: FBgn0031879, uif, uninflatable, [Score=69.3, Expect=1e-12]} {Celegans: WBGene00011222, R10H10.3, [RH, Score=53.1, Expect=9e-08]} {Smed: dd_Smed_v6_5652_0_1, dd_Smed_v6_5652_0_1, [Score=52.0, Expect=3e-07]} {RNA1509_23859} {RNA1310_6101.1} {RNA815_2733.1} Mlig455_042333 {REF} {Length: 1368} {Pfam: Integrase core domain [PF00665.28, score=32.9]} {Smed: dd_Smed_v6_11155_0_2, dd_Smed_v6_11155_0_2, [Score=60.1, Expect=4e-11]} {RNA1509_21400} {RNA1310_6101.1} {RNA815_2733.1} Mlig455_055120 {REF} {Length: 884} {NoTransDecoderORF} {RNA1509_23859} {RNA1310_25192} {RNA815_24957.1}
3.	MligTC455_24137	21	0.43	Mlig455_032992	Neo: - Age: - Region-enriched R4: 5.384/0.03048		1.664	-	-	0.954	-	0.710	-	Mlig455_032992 {REF} {Length: 2235} {TRANSSPLICED} {Pfam: Autophagy-related protein 13 [PF10033.11, score=33.1]} {Dmel: FBgn0261108, Atg13, Autophagy-related 13, [Score=62.4, Expect=3e-10]} {Smed: dd_Smed_v6_4306_0_1, dd_Smed_v6_4306_0_1, [RH, Score=82.8, Expect=3e-17]} {RNA1509_53407, RNA1509_59006} {RNA1310_19264, RNA1509_59006} {RNA1509_59006, RNA815_10011.2}
4.	MligTC455_08070	180	3.75	Mlig455_056509	Neo: Irradiation Age: -	PAK3	0.97	-	-	-	0.970	-	-	Mlig455_056509 {REF} {Length: 3412} {Pfam: Protein kinase domain [PF00069.27, score=203.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=139.4]; P21-Rho-binding domain [PF00786.30, score=69.4]; Fungal protein kinase [PF17667.3, score=19.7]; ABC1 atypical kinase-like domain [PF03109.18, score=18.5]} {Human: ENSG00000077264, PAK3, p21 (RAC1) activated kinase 3, [Score=464, Expect=1e-159]; ENSG00000149269, PAK1, p21 (RAC1) activated kinase 1, [Score=457, Expect=7e-157]; ENSG00000180370, PAK2, p21 (RAC1) activated kinase 2, [Score=447, Expect=3e-153]} {Mouse: ENSMUSG00000031284, Pak3, p21 (RAC1) activated kinase 3, [Score=463, Expect=2e-159]; ENSMUSG00000030774, Pak1, p21 (RAC1) activated kinase 1, [Score=458, Expect=3e-157]; ENSMUSG00000022781, Pak2, p21 (RAC1) activated kinase 2, [Score=448, Expect=1e-153]} {Dmel: FBgn0267698, Pak, p21-activated kinase, [Score=377, Expect=1e-123]} {Celegans: WBGene00003911, pak-1, Serine/threonine-protein kinase pak-1, [Score=363, Expect=6e-121]} {Smed: dd_Smed_v6_5741_0_1, dd_Smed_v6_5741_0_1, [Score=364, Expect=1e-119]} {RNA1509_44357} {RNA1310_21951, RNA1509_44357} {RNA1509_44357, RNA815_14330}
5.	MligTC455_28329	89	1.86	Mlig455_031656	Neo: - Age: -		0.965	-	-	0.965	-	-	-	Mlig455_031656 {REF} {Length: 3392} {Pfam: Integrase core domain [PF00665.28, score=30.9]} {Smed: dd_Smed_v6_11155_0_5, dd_Smed_v6_11155_0_5, [Score=63.5, Expect=9e-13]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}
6.	MligTC455_27803	96	1.99	Mlig455_000283	Neo: - Age: -		0.962	-	-	0.962	-	-	-	Mlig455_000283 {REF} {Length: 3407} {RNA1509_13206} {RNA1310_1311.1} {RNA815_19414}
7.	MligTC455_49192	131	2.74	Mlig455_023636	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.515	PITX2	0.959	-	-	-	-	0.959	-	Mlig455_023636 {REF} {Length: 2211} {Pfam: Homeodomain [PF00046.31, score=62.2]} {Human: ENSG00000164093, PITX2, paired like homeodomain 2, [Score=106, Expect=5e-26]; ENSG00000107859, PITX3, paired like homeodomain 3, [Score=105, Expect=9e-26]; ENSG00000069011, PITX1, paired like homeodomain 1, [Score=102, Expect=8e-25]} {Mouse: ENSMUSG00000028023, Pitx2, paired-like homeodomain transcription factor 2, [Score=106, Expect=3e-26]; ENSMUSG00000025229, Pitx3, paired-like homeodomain transcription factor 3, [Score=105, Expect=7e-26]; ENSMUSG00000021506, Pitx1, paired-like homeodomain transcription factor 1, [Score=103, Expect=4e-25]} {Dmel: FBgn0020912, Ptx1, [Score=110, Expect=1e-26]} {Celegans: WBGene00006766, unc-30, Homeobox protein unc-30, [Score=108, Expect=3e-27]} {Smed: dd_Smed_v6_15253_0_1, dd_Smed_v6_15253_0_1, [Score=108, Expect=5e-27]} {RNA1509_46043} {RNA1310_17678} {RNA815_20652}
8.	MligTC455_50423	77	1.61	Mlig455_006067	Neo: - Age: -	ANKRD50	0.957	-	-	-	-	0.957	-	Mlig455_006067 {REF} {Length: 3852} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=70.0]; Ankyrin repeats (many copies) [PF13637.8, score=67.2]; Mab-21 protein [PF03281.16, score=42.4]; Ankyrin repeat [PF13606.8, score=40.8]; Ankyrin repeats (many copies) [PF13857.8, score=37.3]; Ankyrin repeat [PF00023.32, score=32.6]} {Human: ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=82.8, Expect=2e-15]} {Mouse: ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=87.4, Expect=7e-17]} {Dmel: FBgn0043884, mask, multiple ankyrin repeats single KH domain, [Score=76.3, Expect=1e-13]} {Celegans: WBGene00011240, R11A8.7, Ankyrin repeat and KH domain-containing protein R11A8.7, [Score=65.1, Expect=2e-10]} {Smed: dd_Smed_v6_6779_0_1, dd_Smed_v6_6779_0_1, [Score=82.4, Expect=9e-16]} {RNA1509_27730} {RNA1310_30361} {RNA815_2426.1}
9.	MligTC455_04675	3	0.07	Mlig455_041371	Neo: - Age: Up-Down-Down		0.955	-	-	0.955	-	-	-	Mlig455_041371 {REF} {Length: 2057} {RNA1509_29127} {RNA1310_6200} {RNA815_31134}
10.	MligTC455_13060	99	2.06	Mlig455_022766	Neo: - Age: -		0.955	-	-	0.955	-	-	-	Mlig455_022766 {REF} {Length: 787} {NoTransDecoderORF} {RNA1310_132565}
11.	MligTC455_27648	19	0.39	Mlig455_044670	Neo: - Age: Up-Up-Down, logFC(26M/2M)=0.920	SZT2	0.955	-	-	0.955	-	-	-	Mlig455_044670 {REF} {Length: 12113} {Human: ENSG00000198198, SZT2, SZT2, KICSTOR complex subunit, [Score=82.4, Expect=2e-14]} {Mouse: ENSMUSG00000033253, Szt2, seizure threshold 2, [Score=74.3, Expect=4e-12]} {Smed: dd_Smed_v6_8946_0_1, dd_Smed_v6_8946_0_1, [Score=108, Expect=9e-23]} {RNA1509_25909} {RNA1310_92.1} {RNA815_13061}
12.	MligTC455_10602	7	0.14	Mlig455_069165	Neo: - Age: -		0.953	-	-	0.953	-	-	-	Mlig455_069165 {REF} {Length: 609}
13.	MligTC455_53465	33	0.69	Mlig455_039398	Neo: - Age: -		0.953	-	-	-	0.953	-	-	Mlig455_039398 {REF} {Length: 2675} {Pfam: PDZ domain [PF00595.26, score=27.1]} {RNA1310_42258} {RNA815_27727}
14.	MligTC455_26285	1067	22.23	Mlig455_041966	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.613 Regeneration-enriched TP: 3.474 Regeneration-enriched BL: 3.163	KLF18	0.952	-	-	0.952	-	-	-	Mlig455_041966 {REF} {Length: 15412} {Human: ENSG00000283039, KLF18, Kruppel like factor 18, [Score=83.2, Expect=1e-15]} {Dmel: FBgn0003374, Sgs4, Salivary gland secretion 4, [Score=79.0, Expect=1e-15]} {RNA1509_56304} {RNA1310_9089.1} {RNA815_7548.2}
15.	MligTC455_17679	365	7.59	Mlig455_007359, Mlig455_066674	Neo: - Age: - Region-enriched R2: 2.744/0.00362		0.951	-	-	0.951	-	-	-	Mlig455_007359 {REF} {Length: 1638} {RNA1509_18138} {RNA1310_24629} {RNA815_31762} Mlig455_066674 {REF} {Length: 1869} {RNA1509_18138, RNA1509_36034} {RNA1310_24629, RNA1509_18138, RNA1509_36034} {RNA1509_18138, RNA1509_36034, RNA815_31762}
16.	MligTC455_26072	48	1	Mlig455_002470, Mlig455_045913	Neo: - Age: -		0.95	-	-	0.950	-	-	-	Mlig455_002470 {REF} {Length: 7792} {Pfam: Caspase domain [PF00656.24, score=40.7]} {Mouse: ENSMUSG00000026029, Casp8, caspase 8, [Score=52.0, Expect=2e-07]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=55.8, Expect=3e-09]} {Smed: dd_Smed_v6_8326_0_1, dd_Smed_v6_8326_0_1, [Score=47.8, Expect=1e-06]} {RNA1509_50272} {RNA1310_29664} {RNA815_7717.1} Mlig455_045913 {REF} {Length: 5924} {Pfam: Caspase domain [PF00656.24, score=50.8]} {Mouse: ENSMUSG00000031628, Casp3, caspase 3, [Score=57.0, Expect=1e-08]} {Dmel: FBgn0019972, Drice, Death related ICE-like caspase, [Score=47.4, Expect=1e-05]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=58.2, Expect=3e-09]} {Smed: dd_Smed_v6_8326_0_1, dd_Smed_v6_8326_0_1, [Score=64.7, Expect=8e-12]} {RNA1509_50272} {RNA1310_29664} {RNA815_7717.1}

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