Data search


search
Exact
Search

Results for MligTC455_18302

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_18302 353 7.35 Mlig455_040458

Neo: -

Age: Up-Down-Down

MED1 Mlig455_040458 {REF} {Length: 6029} {TRANSSPLICED} {Pfam: Mediator of RNA polymerase II transcription subunit 1 [PF10744.11, score=26.6]; M-phase phosphoprotein 6 [PF10175.11, score=20.1]} {Human: ENSG00000125686, MED1, mediator complex subunit 1, [RH, Score=102, Expect=4e-21]} {RNA1509_4190} {RNA1310_1177.1, RNA1509_4190} {RNA1509_4190, RNA815_8164}

Cumulative graph for MligTC455_18302

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -6.094 3.381 0.13543 0.73820
RegionR2 1.37 3.381 0.17292 0.51985
RegionR3 0.82 3.381 0.40272 0.93096
RegionR4 1.72 3.381 0.07418 0.25175
RegionR5 1.28 3.381 0.13913 0.38341
RegionR6 1.611 3.381 0.05619 0.44513
RegionR7 0.261 3.381 0.76213 1.00000
RegionR8 -0.968 3.381 0.98678 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.466 3.381 1.00000 1.00000
RegenerationR2 -0.188 3.381 0.75513 0.97471
RegenerationR3 0.608 3.381 0.36613 0.78096
RegenerationR4 0.13 3.381 0.85320 1.00000
RegenerationR5 0.955 3.381 0.12044 0.51962
RegenerationR6 0.151 3.381 0.82176 0.98753
RegenerationBL 1.571 3.381 0.03805 0.22095
RegenerationTP 1.066 3.381 0.29855 0.74410


Genes with expression patterns similar to MligTC455_18302

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_18302 353 7.35 Mlig455_040458

Neo: -

Age: Up-Down-Down

MED1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_040458 {REF} {Length: 6029} {TRANSSPLICED} {Pfam: Mediator of RNA polymerase II transcription subunit 1 [PF10744.11, score=26.6]; M-phase phosphoprotein 6 [PF10175.11, score=20.1]} {Human: ENSG00000125686, MED1, mediator complex subunit 1, [RH, Score=102, Expect=4e-21]} {RNA1509_4190} {RNA1310_1177.1, RNA1509_4190} {RNA1509_4190, RNA815_8164}
2. MligTC455_06593 2638 54.96 Mlig455_015772, Mlig455_049498

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.475

Region-enriched R2: 1.057/0.03873

Regeneration-upregulated R6: 1.343

Regeneration-enriched R6: 1.343

WDR53 1.801 - - - 0.843 - 0.958

Mlig455_015772 {REF} {Length: 2502} {Pfam: WD domain, G-beta repeat [PF00400.34, score=60.4]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=39.0]} {Human: ENSG00000185798, WDR53, WD repeat domain 53, [RH, Score=138, Expect=2e-37]} {Mouse: ENSMUSG00000022787, Wdr53, WD repeat domain 53, [RH, Score=129, Expect=3e-34]} {Dmel: FBgn0036354, Poc1, Proteome of centrioles 1, [Score=55.1, Expect=3e-08]} {Celegans: WBGene00270321, Y41C4A.32, [Score=49.7, Expect=9e-07]} {Smed: dd_Smed_v6_4118_0_1, dd_Smed_v6_4118_0_1, [RH, Score=101, Expect=2e-24]} {RNA1509_3753} {RNA1310_18719} {RNA815_4300}

Mlig455_049498 {REF} {Length: 2502} {Pfam: WD domain, G-beta repeat [PF00400.34, score=60.4]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=39.0]} {Human: ENSG00000185798, WDR53, WD repeat domain 53, [RH, Score=138, Expect=2e-37]} {Mouse: ENSMUSG00000022787, Wdr53, WD repeat domain 53, [RH, Score=129, Expect=3e-34]} {Dmel: FBgn0036354, Poc1, Proteome of centrioles 1, [Score=55.1, Expect=3e-08]} {Celegans: WBGene00270321, Y41C4A.32, [Score=49.7, Expect=9e-07]} {Smed: dd_Smed_v6_4118_0_1, dd_Smed_v6_4118_0_1, [RH, Score=101, Expect=2e-24]} {RNA1509_18081, RNA1509_25733, RNA1509_26103, RNA1509_27935, RNA1509_3753, RNA1509_59855} {RNA1310_18719, RNA1509_18081, RNA1509_25733, RNA1509_26103, RNA1509_27935, RNA1509_3753, RNA1509_59855} {RNA1509_18081, RNA1509_25733, RNA1509_26103, RNA1509_27935, RNA1509_3753, RNA1509_59855, RNA815_4300}
3. MligTC455_42289 636 13.25 Mlig455_027508

Neo: -

Age: -

Region-enriched R5: 1.036/0.00139

SACM1L 1.798 - - - 0.830 - 0.968 Mlig455_027508 {REF} {Length: 2956} {Pfam: SacI homology domain [PF02383.20, score=269.3]} {Human: ENSG00000211456, SACM1L, SAC1 like phosphatidylinositide phosphatase, [RH, Score=532, Expect=0.0]} {Mouse: ENSMUSG00000025240, Sacm1l, SAC1 suppressor of actin mutations 1-like (yeast), [RH, Score=531, Expect=0.0]} {Dmel: FBgn0283500, Sac1, Sac1 phosphatase, [RH, Score=433, Expect=2e-145]} {Celegans: WBGene00009264, sac-1, SAC1 PIP phosphatase (Yeast Suppressor of ACtin) homolog, [RH, Score=404, Expect=6e-134]} {Smed: dd_Smed_v6_3882_0_1, dd_Smed_v6_3882_0_1, [RH, Score=459, Expect=1e-155]} {RNA1509_18875, RNA1509_25818, RNA1509_36443, RNA1509_54775} {RNA1310_3604.2, RNA1509_18875, RNA1509_25818, RNA1509_54775} {RNA1509_18875, RNA1509_25818, RNA1509_54775, RNA815_2551.1}
4. MligTC455_47837 482 10.04 Mlig455_031756

Neo: -

Age: -

1.727 - - - 0.749 - 0.978 Mlig455_031756 {REF} {Length: 1149} {TRANSSPLICED} {Pfam: Det1 complexing ubiquitin ligase [PF10172.11, score=34.3]} {RNA1509_59609} {RNA1310_29699} {RNA815_39284.1}
5. MligTC455_44638 2111 43.99 Mlig455_061680, Mlig455_063129

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.231

PPAN, PPAN-P2RY11 1.681 - - 0.721 - - 0.960

Mlig455_061680 {REF} {Length: 1603} {TRANSSPLICED} {Pfam: Brix domain [PF04427.20, score=127.2]} {Human: ENSG00000130810, PPAN, peter pan homolog (Drosophila), [RH, Score=275, Expect=4e-87]; ENSG00000243207, PPAN-P2RY11, PPAN-P2RY11 readthrough, [RH, Score=275, Expect=1e-86]} {Mouse: ENSMUSG00000004100, Ppan, peter pan homolog, [RH, Score=298, Expect=5e-96]} {Dmel: FBgn0010770, ppan, peter pan, [RH, Score=224, Expect=5e-68]} {Celegans: WBGene00003062, lpd-6, LiPid Depleted, [RH, Score=233, Expect=5e-70]} {Smed: dd_Smed_v6_6350_0_1, dd_Smed_v6_6350_0_1, [RH, Score=218, Expect=6e-65]} {RNA1509_6965} {RNA1310_16869} {RNA815_7601.1}

Mlig455_063129 {REF} {Length: 1603} {TRANSSPLICED} {Pfam: Brix domain [PF04427.20, score=128.6]} {Human: ENSG00000243207, PPAN-P2RY11, PPAN-P2RY11 readthrough, [RH, Score=279, Expect=8e-88]; ENSG00000130810, PPAN, peter pan homolog (Drosophila), [RH, Score=279, Expect=2e-88]} {Mouse: ENSMUSG00000004100, Ppan, peter pan homolog, [RH, Score=299, Expect=2e-96]} {Dmel: FBgn0010770, ppan, peter pan, [RH, Score=227, Expect=5e-69]} {Celegans: WBGene00003062, lpd-6, LiPid Depleted, [RH, Score=234, Expect=1e-70]} {Smed: dd_Smed_v6_6350_0_1, dd_Smed_v6_6350_0_1, [RH, Score=222, Expect=1e-66]} {RNA1509_6965} {RNA1310_16869, RNA1509_6965} {RNA1509_6965, RNA815_7601.1}
6. MligTC455_49231 1726 35.96 Mlig455_058129

Neo: Neoblast

Age: Down-Down-Up, logFC(26M/2M)=0.199

Region-enriched R5: 1.040/0.00189

PHB 1.671 - - - 0.713 - 0.958 Mlig455_058129 {REF} {Length: 1924} {TRANSSPLICED} {Pfam: SPFH domain / Band 7 family [PF01145.27, score=86.2]} {Human: ENSG00000167085, PHB, prohibitin, [RH, Score=370, Expect=8e-130]} {Mouse: ENSMUSG00000038845, Phb, prohibitin, [RH, Score=369, Expect=1e-129]} {Dmel: FBgn0002031, l(2)37Cc, lethal (2) 37Cc, [RH, Score=373, Expect=3e-131]} {Celegans: WBGene00004014, phb-1, Mitochondrial prohibitin complex protein 1, [RH, Score=345, Expect=2e-120]} {Smed: dd_Smed_v6_1038_0_1, dd_Smed_v6_1038_0_1, [RH, Score=337, Expect=3e-117]} {RNA1509_3657} {RNA1310_32949.2} {RNA815_14267.1}
7. MligTC455_27208 670 13.95 Mlig455_042079

Neo: -

Age: Down-Up-Down

Region-enriched R5: 1.323/0.00029

0.967 - - - 0.967 - - Mlig455_042079 {REF} {Length: 1743} {NoTransDecoderORF} {RNA1509_19104} {RNA1310_30704} {RNA815_17804}
8. MligTC455_43468 514 10.7 Mlig455_029758

Neo: -

Age: -

Region-enriched R5: 1.148/0.00735

AC068896.1 0.964 - - - - - 0.964 Mlig455_029758 {REF} {Length: 743} {TRANSSPLICED} {Pfam: Methyltransferase domain [PF13847.8, score=19.6]; Methyltransferase domain [PF13679.8, score=19.2]} {Human: ENSG00000258539, AC068896.1, novel transcript (METTL10-FAM53B readthrough), [Score=58.2, Expect=1e-10]; ENSG00000203791, EEF1AKMT2, EEF1A lysine methyltransferase 2, [Score=57.0, Expect=6e-10]} {Mouse: ENSMUSG00000030960, Eef1akmt2, EEF1A lysine methyltransferase 2, [Score=55.8, Expect=8e-10]} {Dmel: FBgn0031485, CG9643, [Score=67.0, Expect=3e-14]} {Smed: dd_Smed_v6_14909_0_1, dd_Smed_v6_14909_0_1, [Score=65.9, Expect=4e-14]} {RNA1509_10069} {RNA1310_30651} {RNA815_14038}
9. MligTC455_44902 6035 125.74 Mlig455_068136

Neo: -

Age: Down-Up-Up

EIF3H 0.963 - - - - - 0.963 Mlig455_068136 {REF} {Length: 1504} {TRANSSPLICED} {Pfam: C-terminal region of eIF3h [PF19445.1, score=130.6]; JAB1/Mov34/MPN/PAD-1 ubiquitin protease [PF01398.23, score=58.1]} {Human: ENSG00000147677, EIF3H, eukaryotic translation initiation factor 3 subunit H, [RH, Score=234, Expect=1e-73]} {Mouse: ENSMUSG00000022312, Eif3h, eukaryotic translation initiation factor 3, subunit H, [RH, Score=232, Expect=5e-73]} {Dmel: FBgn0022023, eIF3h, eukaryotic translation initiation factor 3 subunit h, [RH, Score=193, Expect=3e-58]} {Celegans: WBGene00001231, eif-3.H, Eukaryotic translation initiation factor 3 subunit H, [RH, Score=154, Expect=2e-43]} {Smed: dd_Smed_v6_1220_0_1, dd_Smed_v6_1220_0_1, [RH, Score=164, Expect=3e-47]} {RNA1509_1028} {RNA1310_20679, RNA1509_1028} {RNA1509_1028, RNA815_8818}
10. MligTC455_42083 1795 37.39 Mlig455_037821

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.235

0.962 - - - - - 0.962 Mlig455_037821 {REF} {Length: 4217} {Pfam: DNA polymerase phi [PF04931.15, score=80.9]} {RNA1509_3413, RNA1509_39819} {RNA1310_2049.2, RNA1509_3413, RNA1509_39819} {RNA1509_3413, RNA1509_39819, RNA815_568.1}
11. MligTC455_52751 363 7.56 Mlig455_039748

Neo: -

Age: Down-Up-Down

0.962 - - - - - 0.962 Mlig455_039748 {REF} {Length: 1589} {TRANSSPLICED} {RNA1509_34696} {RNA1310_20294.1} {RNA815_8918.1}
12. MligTC455_15561 4408 91.82 Mlig455_000449, Mlig455_024832

Neo: Int S/G2/M

Age: Down-Up-Down

Region-enriched R5: 1.363/0.00000

CISD2 0.957 - - - - - 0.957

Mlig455_000449 {REF} {Length: 1155} {Pfam: Iron-containing outer mitochondrial membrane protein N-terminus [PF10660.11, score=52.1]; Iron-binding zinc finger CDGSH type [PF09360.12, score=40.7]} {Human: ENSG00000145354, CISD2, CDGSH iron sulfur domain 2, [RH, Score=111, Expect=5e-32]} {Mouse: ENSMUSG00000028165, Cisd2, CDGSH iron sulfur domain 2, [RH, Score=112, Expect=2e-32]} {Dmel: FBgn0062442, Cisd2, CDGSH iron sulfur domain 2, [RH, Score=107, Expect=1e-30]} {Celegans: WBGene00044026, cisd-1, CDGSH Iron Sulfur Domain protein homolog, [RH, Score=92.8, Expect=4e-25]} {Smed: dd_Smed_v6_2098_0_1, dd_Smed_v6_2098_0_1, [RH, Score=129, Expect=3e-39]} {RNA1509_6681} {RNA1310_37871.1} {RNA815_19106}

Mlig455_024832 {REF} {Length: 1210} {Pfam: Iron-containing outer mitochondrial membrane protein N-terminus [PF10660.11, score=51.6]; Iron-binding zinc finger CDGSH type [PF09360.12, score=40.7]} {Human: ENSG00000145354, CISD2, CDGSH iron sulfur domain 2, [RH, Score=111, Expect=6e-32]} {Mouse: ENSMUSG00000028165, Cisd2, CDGSH iron sulfur domain 2, [RH, Score=112, Expect=2e-32]} {Dmel: FBgn0062442, Cisd2, CDGSH iron sulfur domain 2, [RH, Score=108, Expect=4e-31]} {Celegans: WBGene00044026, cisd-1, CDGSH Iron Sulfur Domain protein homolog, [RH, Score=92.8, Expect=2e-25]} {Smed: dd_Smed_v6_2098_0_1, dd_Smed_v6_2098_0_1, [RH, Score=125, Expect=5e-38]} {RNA1509_13077, RNA1509_13390, RNA1509_6681} {RNA1310_37871.1, RNA1509_13077, RNA1509_13390, RNA1509_6681} {RNA1509_13077, RNA1509_13390, RNA1509_6681, RNA815_19106}
13. MligTC455_44903 5795 120.73 Mlig455_068153

Neo: -

Age: logFC(26M/2M)=5.027

EIF3H 0.955 - - - - - 0.955 Mlig455_068153 {REF} {Length: 1526} {TRANSSPLICED} {Pfam: C-terminal region of eIF3h [PF19445.1, score=92.8]; JAB1/Mov34/MPN/PAD-1 ubiquitin protease [PF01398.23, score=53.9]; Chorion family 2 [PF03964.17, score=23.0]} {Human: ENSG00000147677, EIF3H, eukaryotic translation initiation factor 3 subunit H, [Score=195, Expect=1e-58]} {Mouse: ENSMUSG00000022312, Eif3h, eukaryotic translation initiation factor 3, subunit H, [Score=193, Expect=6e-58]} {Dmel: FBgn0022023, eIF3h, eukaryotic translation initiation factor 3 subunit h, [Score=152, Expect=1e-42]} {Celegans: WBGene00001231, eif-3.H, Eukaryotic translation initiation factor 3 subunit H, [Score=135, Expect=3e-36]} {Smed: dd_Smed_v6_1220_0_1, dd_Smed_v6_1220_0_1, [Score=142, Expect=6e-39]} {RNA1509_1028} {RNA1310_5496} {RNA815_8818}
14. MligTC455_54219 1004 20.92 Mlig455_056207

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.346

Regeneration-upregulated R6: 1.561

Regeneration-enriched R6: 1.561

NUP93 0.955 - - - - - 0.955 Mlig455_056207 {REF} {Length: 3132} {Pfam: Nup93/Nic96 [PF04097.16, score=370.6]} {Human: ENSG00000102900, NUP93, nucleoporin 93, [RH, Score=436, Expect=7e-140]} {Mouse: ENSMUSG00000032939, Nup93, nucleoporin 93, [RH, Score=440, Expect=1e-141]} {Dmel: FBgn0027537, Nup93-1, Nucleoporin 93kD-1, [RH, Score=295, Expect=4e-87]} {Smed: dd_Smed_v6_9207_0_1, dd_Smed_v6_9207_0_1, [RH, Score=318, Expect=8e-96]} {RNA1509_8355} {RNA1310_4739, RNA1509_8355} {RNA1509_8355, RNA815_23464}
15. MligTC455_43469 518 10.8 Mlig455_029763

Neo: -

Age: -

Region-enriched R5: 1.169/0.00582

AC068896.1 0.954 - - - - - 0.954 Mlig455_029763 {REF} {Length: 1148} {TRANSSPLICED} {Pfam: Methyltransferase domain [PF13847.8, score=34.3]; Methyltransferase domain [PF13679.8, score=29.9]; Methyltransferase domain [PF13649.8, score=26.7]; Methyltransferase small domain [PF05175.16, score=20.5]; Methyltransferase domain [PF08241.14, score=19.9]; Methyltransferase domain [PF08242.14, score=19.7]} {Human: ENSG00000258539, AC068896.1, novel transcript (METTL10-FAM53B readthrough), [RH, Score=115, Expect=1e-30]} {Mouse: ENSMUSG00000030960, Eef1akmt2, EEF1A lysine methyltransferase 2, [RH, Score=123, Expect=1e-33]} {Dmel: FBgn0031485, CG9643, [RH, Score=141, Expect=5e-41]} {Celegans: WBGene00017919, F29B9.1, Protein-lysine N-methyltransferase CELE_F29B9.1, [RH, Score=104, Expect=1e-26]} {Smed: dd_Smed_v6_14909_0_1, dd_Smed_v6_14909_0_1, [RH, Score=115, Expect=1e-31]} {RNA1509_10069} {RNA1310_30651} {RNA815_14038}
16. MligTC455_49293 7685 160.1 Mlig455_066535

Neo: Neoblast, stringent

Age: logFC(26M/2M)=0.476

Regeneration-upregulated BL: 1.053

Regeneration-enriched BL: 1.053

0.954 - - - - - 0.954 Mlig455_066535 {REF} {Length: 2900} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=31.1]} {Celegans: WBGene00004315, rbd-1, RBD (RNA binding domain) protein, [Score=49.7, Expect=5e-06]} {Smed: dd_Smed_v6_9127_0_1, dd_Smed_v6_9127_0_1, [Score=62.4, Expect=5e-10]} {RNA1509_11326, RNA1509_28717, RNA1509_628} {RNA1310_6015.1, RNA1509_11326, RNA1509_28717, RNA1509_628} {RNA1509_11326, RNA1509_28717, RNA1509_628, RNA815_4437.1}
17. MligTC455_40162 127 2.64 Mlig455_056888

Neo: -

Age: -

0.953 - - - - - 0.953 Mlig455_056888 {REF} {Length: 1414} {RNA1509_32321} {RNA1310_25769} {RNA815_54259}
18. MligTC455_40736 1800 37.51 Mlig455_041324, Mlig455_041350, Mlig455_056239

Neo: Neoblast, stringent

Age: -

Regeneration-enriched R3: 2.092
Regeneration-enriched BL: 1.703

ZMYM2 0.953 - - - - - 0.953

Mlig455_041324 {REF} {Length: 2405} {Pfam: Domain of unknown function (DUF3504) [PF12012.10, score=98.9]} {Human: ENSG00000121741, ZMYM2, zinc finger MYM-type containing 2, [RH, Score=171, Expect=1e-44]; ENSG00000147130, ZMYM3, zinc finger MYM-type containing 3, [RH, Score=170, Expect=3e-44]; ENSG00000146463, ZMYM4, zinc finger MYM-type containing 4, [RH, Score=164, Expect=3e-42]} {Mouse: ENSMUSG00000021945, Zmym2, zinc finger, MYM-type 2, [RH, Score=172, Expect=5e-45]; ENSMUSG00000031310, Zmym3, zinc finger, MYM-type 3, [RH, Score=169, Expect=7e-44]} {Dmel: FBgn0010328, woc, without children, [RH, Score=195, Expect=9e-54]} {Smed: dd_Smed_v6_3776_0_1, dd_Smed_v6_3776_0_1, [RH, Score=213, Expect=4e-61]} {RNA1509_1760, RNA1509_41443} {RNA1310_2174.1, RNA1509_41443} {RNA1509_41443, RNA815_21304}

Mlig455_041350 {REF} {Length: 2412} {Pfam: Domain of unknown function (DUF3504) [PF12012.10, score=98.8]} {Human: ENSG00000121741, ZMYM2, zinc finger MYM-type containing 2, [RH, Score=172, Expect=1e-44]; ENSG00000147130, ZMYM3, zinc finger MYM-type containing 3, [RH, Score=171, Expect=2e-44]; ENSG00000146463, ZMYM4, zinc finger MYM-type containing 4, [RH, Score=164, Expect=3e-42]} {Mouse: ENSMUSG00000021945, Zmym2, zinc finger, MYM-type 2, [RH, Score=172, Expect=5e-45]; ENSMUSG00000031310, Zmym3, zinc finger, MYM-type 3, [RH, Score=169, Expect=7e-44]} {Dmel: FBgn0010328, woc, without children, [RH, Score=195, Expect=8e-54]} {Smed: dd_Smed_v6_3776_0_1, dd_Smed_v6_3776_0_1, [RH, Score=213, Expect=5e-61]} {RNA1509_1760} {RNA1310_2174.1} {RNA815_21304}

Mlig455_056239 {REF} {Length: 2397} {Pfam: Domain of unknown function (DUF3504) [PF12012.10, score=98.9]} {Human: ENSG00000121741, ZMYM2, zinc finger MYM-type containing 2, [RH, Score=173, Expect=4e-45]; ENSG00000147130, ZMYM3, zinc finger MYM-type containing 3, [RH, Score=169, Expect=9e-44]} {Mouse: ENSMUSG00000021945, Zmym2, zinc finger, MYM-type 2, [RH, Score=174, Expect=2e-45]; ENSMUSG00000031310, Zmym3, zinc finger, MYM-type 3, [RH, Score=167, Expect=2e-43]} {Dmel: FBgn0010328, woc, without children, [RH, Score=194, Expect=1e-53]} {Smed: dd_Smed_v6_3776_0_1, dd_Smed_v6_3776_0_1, [RH, Score=212, Expect=5e-61]} {RNA1509_1760} {RNA1310_2174.1, RNA1509_1760} {RNA1509_1760, RNA815_21304}
19. MligTC455_27209 850 17.7 Mlig455_042304

Neo: -

Age: -

Region-enriched R4: 1.246/0.01505

CSDE1 0.952 - - - 0.952 - - Mlig455_042304 {REF} {Length: 6022} {Pfam: 'Cold-shock' DNA-binding domain [PF00313.24, score=36.5]} {Human: ENSG00000009307, CSDE1, cold shock domain containing E1, [Score=127, Expect=1e-31]} {Mouse: ENSMUSG00000068823, Csde1, cold shock domain containing E1, RNA binding, [Score=127, Expect=8e-32]} {Dmel: FBgn0263352, Unr, Upstream of N-ras, [Score=117, Expect=2e-28]} {Smed: dd_Smed_v6_598_0_1, dd_Smed_v6_598_0_1, [Score=127, Expect=9e-32]} {RNA1509_19104, RNA1509_34863} {RNA1310_30704, RNA1509_19104, RNA1509_34863} {RNA1509_19104, RNA1509_34863, RNA815_2002}
20. MligTC455_51076 304 6.33 Mlig455_060575

Neo: -

Age: Down-Down-Up

ARFGEF3 0.952 - - - - - 0.952 Mlig455_060575 {REF} {Length: 7036} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF1981) [PF09324.12, score=27.7]} {Human: ENSG00000112379, ARFGEF3, ARFGEF family member 3, [RH, Score=316, Expect=5e-87]} {Mouse: ENSMUSG00000019852, Arfgef3, ARFGEF family member 3, [Score=290, Expect=6e-79]} {Dmel: FBgn0029834, CG5937, [Score=243, Expect=1e-64]} {Celegans: WBGene00012386, agef-1, Arf-1 Guanine nucleotide Exchange Factor homolog, [Score=73.6, Expect=1e-12]} {Smed: dd_Smed_v6_5314_0_2, dd_Smed_v6_5314_0_2, [Score=69.7, Expect=1e-11]} {RNA1509_14718} {RNA1310_5931} {RNA815_20733}
21. MligTC455_15825 424 8.84 Mlig455_037341

Neo: -

Age: Up-Down-Down

0.951 - - - - - 0.951 Mlig455_037341 {REF} {Length: 3883} {Smed: dd_Smed_v6_11002_0_1, dd_Smed_v6_11002_0_1, [RH, Score=61.2, Expect=8e-10]} {RNA1509_18042, RNA1509_37280} {RNA1310_7557, RNA1509_37280} {RNA1509_37280, RNA815_16831}
22. MligTC455_17799 910 18.96 Mlig455_039410

Neo: Int S/G2/M

Age: Down-Up-Up

SARS2 0.951 - - - - - 0.951 Mlig455_039410 {REF} {Length: 1953} {TRANSSPLICED} {Pfam: tRNA synthetase class II core domain (G, H, P, S and T) [PF00587.27, score=66.8]; Pre-rRNA-processing protein TSR2 [PF10273.11, score=63.1]} {Human: ENSG00000283104, SARS2, seryl-tRNA synthetase 2, mitochondrial, [RH, Score=244, Expect=5e-73]; ENSG00000104835, SARS2, seryl-tRNA synthetase 2, mitochondrial, [RH, Score=244, Expect=5e-73]; ENSG00000269547, AC011455.2, novel protein, [RH, Score=243, Expect=4e-72]; ENSG00000282835, AC011455.3, novel protein, [RH, Score=243, Expect=4e-72]} {Mouse: ENSMUSG00000070699, Sars2, seryl-aminoacyl-tRNA synthetase 2, [RH, Score=247, Expect=3e-74]} {Dmel: FBgn0021750, SerRS-m, Seryl-tRNA synthetase, mitochondrial, [RH, Score=233, Expect=2e-70]} {Celegans: WBGene00005662, sars-2, Seryl Amino-acyl tRNA Synthetase; Seryl-tRNA synthetase, [RH, Score=223, Expect=2e-66]} {Smed: dd_Smed_v6_9202_0_1, dd_Smed_v6_9202_0_1, [RH, Score=252, Expect=6e-78]} {RNA1509_14477, RNA1509_32857} {RNA1310_19261, RNA1509_14477, RNA1509_32857} {RNA1509_14477, RNA1509_32857, RNA815_14133}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA