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Results for MligTC455_27209

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_27209 850 17.70 Mlig455_042304

Neo: -

Age: -

Region-enriched R4: 1.246/0.01505

 CSDE1 Mlig455_042304 {REF} {Length: 6022} {Pfam: 'Cold-shock' DNA-binding domain [PF00313.24, score=36.5]} {Human: ENSG00000009307, CSDE1, cold shock domain containing E1, [Score=127, Expect=1e-31]} {Mouse: ENSMUSG00000068823, Csde1, cold shock domain containing E1, RNA binding, [Score=127, Expect=8e-32]} {Dmel: FBgn0263352, Unr, Upstream of N-ras, [Score=117, Expect=2e-28]} {Smed: dd_Smed_v6_598_0_1, dd_Smed_v6_598_0_1, [Score=127, Expect=9e-32]} {RNA1509_19104, RNA1509_34863} {RNA1310_30704, RNA1509_19104, RNA1509_34863} {RNA1509_19104, RNA1509_34863, RNA815_2002}

Cumulative graph for MligTC455_27209

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.286 4.363 0.76730 1.00000
RegionR2 -0.439 4.363 0.31061 0.70146
RegionR3 0.029 4.363 0.93120 1.00000
RegionR4 1.246 4.363 0.00160 0.01505
RegionR5 0.858 4.363 0.00355 0.02679
RegionR6 -0.318 4.363 0.38694 0.96374
RegionR7 -1.005 4.363 0.06227 0.47937
RegionR8 -0.658 4.363 0.29153 0.91975

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.641 4.363 0.58042 1.00000
RegenerationR2 0.384 4.363 0.28000 0.72378
RegenerationR3 0.091 4.363 0.81340 0.98588
RegenerationR4 -0.453 4.363 0.24363 0.69167
RegenerationR5 -0.153 4.363 0.65516 0.93397
RegenerationR6 0.767 4.363 0.05603 0.29696
RegenerationBL 1.044 4.363 0.02870 0.18827
RegenerationTP 0.976 4.363 0.07260 0.43155


Genes with expression patterns similar to MligTC455_27209

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_27209 850 17.7 Mlig455_042304

Neo: -

Age: -

Region-enriched R4: 1.246/0.01505

 CSDE1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_042304 {REF} {Length: 6022} {Pfam: 'Cold-shock' DNA-binding domain [PF00313.24, score=36.5]} {Human: ENSG00000009307, CSDE1, cold shock domain containing E1, [Score=127, Expect=1e-31]} {Mouse: ENSMUSG00000068823, Csde1, cold shock domain containing E1, RNA binding, [Score=127, Expect=8e-32]} {Dmel: FBgn0263352, Unr, Upstream of N-ras, [Score=117, Expect=2e-28]} {Smed: dd_Smed_v6_598_0_1, dd_Smed_v6_598_0_1, [Score=127, Expect=9e-32]} {RNA1509_19104, RNA1509_34863} {RNA1310_30704, RNA1509_19104, RNA1509_34863} {RNA1509_19104, RNA1509_34863, RNA815_2002}
2. MligTC455_27208 670 13.95 Mlig455_042079

Neo: -

Age: Down-Up-Down

Region-enriched R5: 1.323/0.00029

 3.821 0.878 - 0.977 0.983 - 0.983 Mlig455_042079 {REF} {Length: 1743} {NoTransDecoderORF} {RNA1509_19104} {RNA1310_30704} {RNA815_17804}
3. MligTC455_23450 3559 74.14 Mlig455_053284, Mlig455_053425

Neo: Neoblast

Age: -

 GSPT1 0.958 - - - 0.958 - -

Mlig455_053284 {REF} {Length: 3030} {Pfam: Elongation factor Tu GTP binding domain [PF00009.29, score=142.6]; Elongation factor Tu C-terminal domain [PF03143.19, score=72.5]; Elongation factor Tu domain 2 [PF03144.27, score=37.0]; Ataxin-2 C-terminal region [PF07145.17, score=24.4]} {Human: ENSG00000103342, GSPT1, G1 to S phase transition 1, [RH, Score=637, Expect=0.0]; ENSG00000189369, GSPT2, G1 to S phase transition 2, [RH, Score=632, Expect=0.0]} {Mouse: ENSMUSG00000062203, Gspt1, G1 to S phase transition 1, [RH, Score=639, Expect=0.0]; ENSMUSG00000071723, Gspt2, G1 to S phase transition 2, [RH, Score=632, Expect=0.0]} {Dmel: FBgn0020443, eRF3, eukaryotic translation release factor 3, [RH, Score=627, Expect=0.0]} {Celegans: WBGene00010405, erfa-3, Eukaryotic Release FActor homolog, [RH, Score=555, Expect=0.0]} {Smed: dd_Smed_v6_1469_0_1, dd_Smed_v6_1469_0_1, [RH, Score=518, Expect=3e-180]} {RNA1509_2289} {RNA1310_5788, RNA1509_2289} {RNA1509_2289, RNA815_1880.1}

Mlig455_053425 {REF} {Length: 3016} {Pfam: Elongation factor Tu GTP binding domain [PF00009.29, score=142.6]; Elongation factor Tu C-terminal domain [PF03143.19, score=72.5]; Elongation factor Tu domain 2 [PF03144.27, score=37.0]; Ataxin-2 C-terminal region [PF07145.17, score=24.4]} {Human: ENSG00000103342, GSPT1, G1 to S phase transition 1, [RH, Score=637, Expect=0.0]; ENSG00000189369, GSPT2, G1 to S phase transition 2, [RH, Score=632, Expect=0.0]} {Mouse: ENSMUSG00000062203, Gspt1, G1 to S phase transition 1, [RH, Score=639, Expect=0.0]; ENSMUSG00000071723, Gspt2, G1 to S phase transition 2, [RH, Score=633, Expect=0.0]} {Dmel: FBgn0020443, eRF3, eukaryotic translation release factor 3, [RH, Score=627, Expect=0.0]} {Celegans: WBGene00010405, erfa-3, Eukaryotic Release FActor homolog, [RH, Score=555, Expect=0.0]} {Smed: dd_Smed_v6_1469_0_1, dd_Smed_v6_1469_0_1, [RH, Score=519, Expect=2e-180]} {RNA1509_2289, RNA1509_8337} {RNA1310_5788, RNA1509_8337} {RNA1509_8337, RNA815_1880.1}
4. MligTC455_47046 629 13.1 Mlig455_051939

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.298/0.00457

 0.956 - - - - - 0.956 Mlig455_051939 {REF} {Length: 493} {TRANSSPLICED} {RNA1509_56604} {RNA1310_60152.2, RNA1509_56604} {RNA1509_56604, RNA815_39626}
5. MligTC455_18302 353 7.35 Mlig455_040458

Neo: -

Age: Up-Down-Down

 MED1 0.952 - - - 0.952 - - Mlig455_040458 {REF} {Length: 6029} {TRANSSPLICED} {Pfam: Mediator of RNA polymerase II transcription subunit 1 [PF10744.11, score=26.6]; M-phase phosphoprotein 6 [PF10175.11, score=20.1]} {Human: ENSG00000125686, MED1, mediator complex subunit 1, [RH, Score=102, Expect=4e-21]} {RNA1509_4190} {RNA1310_1177.1, RNA1509_4190} {RNA1509_4190, RNA815_8164}
6. MligTC455_19293 713 14.85 Mlig455_039275

Neo: -

Age: -

Region-enriched R4: 1.861/0.01211

 CD2AP 0.952 - - - 0.952 - - Mlig455_039275 {REF} {Length: 4363} {TRANSSPLICED} {Pfam: Variant SH3 domain [PF14604.8, score=96.1]; SH3 domain [PF00018.30, score=77.9]; Variant SH3 domain [PF07653.19, score=66.4]} {Human: ENSG00000198087, CD2AP, CD2 associated protein, [RH, Score=97.1, Expect=3e-21]; ENSG00000147010, SH3KBP1, SH3 domain containing kinase binding protein 1, [RH, Score=94.7, Expect=2e-20]} {Mouse: ENSMUSG00000040990, Sh3kbp1, SH3-domain kinase binding protein 1, [RH, Score=96.7, Expect=3e-21]} {Dmel: FBgn0027598, cindr, CIN85 and CD2AP related, [Score=68.6, Expect=3e-12]} {Celegans: WBGene00003374, mlk-1, Mitogen-activated protein kinase kinase kinase mlk-1, [Score=57.8, Expect=7e-09]} {Smed: dd_Smed_v6_1522_0_1, dd_Smed_v6_1522_0_1, [Score=121, Expect=3e-30]} {RNA1509_50050} {RNA1310_6080.1} {RNA815_5457}

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