Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_18572 | 145 | 3.02 | Mlig455_056904 | Neo: - Age: - |
INTS14 | Mlig455_056904 {REF} {Length: 2480} {TRANSSPLICED} {Pfam: Integrator complex subunit 14 [PF19435.1, score=215.8]; von Willebrand factor type A domain [PF13519.8, score=37.1]} {Human: ENSG00000138614, INTS14, integrator complex subunit 14, [RH, Score=219, Expect=2e-64]} {Mouse: ENSMUSG00000034263, Ints14, integrator complex subunit 14, [RH, Score=220, Expect=4e-65]} {Dmel: FBgn0031314, IntS14, Integrator 14, [RH, Score=147, Expect=5e-38]} {Smed: dd_Smed_v6_10096_0_1, dd_Smed_v6_10096_0_1, [RH, Score=81.6, Expect=2e-16]} {RNA1509_36716} {RNA1310_3852.1, RNA1509_36716} {RNA1509_36716, RNA815_12770} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -4.543 | 2.444 | 0.37500 | 1.00000 | |
RegionR2 | -0.164 | 2.444 | 0.90598 | 1.00000 | |
RegionR3 | 0.113 | 2.444 | 0.81355 | 1.00000 | |
RegionR4 | 1.736 | 2.444 | 0.07873 | 0.26209 | |
RegionR5 | 0.903 | 2.444 | 0.27779 | 0.60486 | |
RegionR6 | 0.701 | 2.444 | 0.46828 | 1.00000 | |
RegionR7 | -0.146 | 2.444 | 0.90210 | 1.00000 | |
RegionR8 | 1.399 | 2.444 | 0.27247 | 0.89549 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | 0.346 | 2.444 | 0.99984 | 1.00000 | |
RegenerationR2 | 0.114 | 2.444 | 0.88591 | 1.00000 | |
RegenerationR3 | 0.379 | 2.444 | 0.58048 | 0.89892 | |
RegenerationR4 | -0.879 | 2.444 | 0.19782 | 0.64309 | |
RegenerationR5 | -0.383 | 2.444 | 0.49798 | 0.85751 | |
RegenerationR6 | -0.083 | 2.444 | 0.90671 | 1.00000 | |
RegenerationBL | 0.625 | 2.444 | 0.51695 | 0.87961 | |
RegenerationTP | -0.769 | 2.444 | 0.49618 | 0.89813 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_18572 | 145 | 3.02 | Mlig455_056904 | Neo: - Age: - |
INTS14 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_056904 {REF} {Length: 2480} {TRANSSPLICED} {Pfam: Integrator complex subunit 14 [PF19435.1, score=215.8]; von Willebrand factor type A domain [PF13519.8, score=37.1]} {Human: ENSG00000138614, INTS14, integrator complex subunit 14, [RH, Score=219, Expect=2e-64]} {Mouse: ENSMUSG00000034263, Ints14, integrator complex subunit 14, [RH, Score=220, Expect=4e-65]} {Dmel: FBgn0031314, IntS14, Integrator 14, [RH, Score=147, Expect=5e-38]} {Smed: dd_Smed_v6_10096_0_1, dd_Smed_v6_10096_0_1, [RH, Score=81.6, Expect=2e-16]} {RNA1509_36716} {RNA1310_3852.1, RNA1509_36716} {RNA1509_36716, RNA815_12770} |
2. | MligTC455_21500 | 120 | 2.49 | Mlig455_002512 | Neo: - Age: - |
MTMR9 | 1.686 | 0.965 | 0.721 | - | - | - | - | Mlig455_002512 {REF} {Length: 2934} {TRANSSPLICED} {Pfam: Myotubularin-like phosphatase domain [PF06602.16, score=203.7]} {Human: ENSG00000104643, MTMR9, myotubularin related protein 9, [Score=233, Expect=1e-68]} {Mouse: ENSMUSG00000035078, Mtmr9, myotubularin related protein 9, [Score=235, Expect=1e-69]} {Dmel: FBgn0035945, CG5026, [Score=179, Expect=2e-48]} {Celegans: WBGene00003479, mtm-9, Myotubularin-related protein 9, [Score=171, Expect=3e-46]} {Smed: dd_Smed_v6_5322_0_1, dd_Smed_v6_5322_0_1, [Score=140, Expect=2e-35]} {RNA1509_13620} {RNA1310_11099} {RNA815_7719} |
3. | MligTC455_28947 | 147 | 3.06 | Mlig455_014683 | Neo: Irradiation Age: Down-Up-Down |
1.684 | 0.959 | - | - | 0.725 | - | - | Mlig455_014683 {REF} {Length: 2675} {TRANSSPLICED} {RNA1509_53618} {RNA1310_6731.1} {RNA815_19384} | |
4. | MligTC455_43850 | 330 | 6.88 | Mlig455_039408 | Neo: Irradiation Age: - |
0.976 | - | - | - | - | - | 0.976 | Mlig455_039408 {REF} {Length: 3313} {TRANSSPLICED} {Pfam: Rieske [2Fe-2S] domain [PF00355.28, score=30.0]} {Smed: dd_Smed_v6_8988_0_3, dd_Smed_v6_8988_0_3, [RH, Score=85.1, Expect=1e-18]} {RNA1509_42363} {RNA1310_20471.1, RNA1509_42363} {RNA1509_42363, RNA815_18260} | |
5. | MligTC455_13377 | 113 | 2.36 | Mlig455_011815 | Neo: Int S/G2/M Age: - Region-enriched R4: 3.497/0.04039 |
0.974 | - | - | 0.974 | - | - | - | Mlig455_011815 {REF} {Length: 4537} {RNA1509_52931} {RNA1310_30389} {RNA815_22074} | |
6. | MligTC455_37889 | 489 | 10.18 | Mlig455_027423 | Neo: - Age: - Region-enriched R4: 2.078/0.03165 |
CUL4A | 0.972 | - | - | - | - | - | 0.972 | Mlig455_027423 {REF} {Length: 3633} {TRANSSPLICED} {Pfam: Cullin family [PF00888.24, score=625.5]; Cullin protein neddylation domain [PF10557.11, score=82.8]} {Human: ENSG00000139842, CUL4A, cullin 4A, [RH, Score=776, Expect=0.0]; ENSG00000158290, CUL4B, cullin 4B, [RH, Score=773, Expect=0.0]} {Mouse: ENSMUSG00000031095, Cul4b, cullin 4B, [RH, Score=776, Expect=0.0]; ENSMUSG00000031446, Cul4a, cullin 4A, [RH, Score=762, Expect=0.0]} {Dmel: FBgn0033260, Cul4, Cullin 4, [RH, Score=762, Expect=0.0]} {Celegans: WBGene00000838, cul-3, Cullin-3, [Score=386, Expect=8e-123]} {Smed: dd_Smed_v6_3730_1_1, dd_Smed_v6_3730_1_1, [RH, Score=503, Expect=3e-168]} {RNA1509_39933, RNA1509_48205, RNA1509_9681} {RNA1310_8801, RNA1509_39933, RNA1509_48205} {RNA1509_39933, RNA1509_48205, RNA815_2851} |
7. | MligTC455_45043 | 50 | 1.05 | Mlig455_015382 | Neo: Int S/G2/M Age: - |
FANCI | 0.963 | 0.963 | - | - | - | - | - | Mlig455_015382 {REF} {Length: 5579} {TRANSSPLICED} {Pfam: FANCI solenoid 4 [PF14678.8, score=99.8]; FANCI solenoid 2 [PF14676.8, score=87.0]; FANCI helical domain 2 [PF14680.8, score=79.4]; FANCI solenoid 1 [PF14675.8, score=68.0]; FANCI helical domain 1 [PF14679.8, score=26.8]} {Human: ENSG00000140525, FANCI, FA complementation group I, [RH, Score=169, Expect=8e-42]} {Mouse: ENSMUSG00000039187, Fanci, Fanconi anemia, complementation group I, [RH, Score=190, Expect=3e-48]} {Smed: dd_Smed_v6_8024_0_1, dd_Smed_v6_8024_0_1, [Score=60.1, Expect=1e-08]} {RNA1509_14043, RNA1509_46132} {RNA1310_3141, RNA1509_14043, RNA1509_46132} {RNA1509_14043, RNA1509_46132, RNA815_12076} |
8. | MligTC455_16477 | 427 | 8.9 | Mlig455_042989 | Neo: - Age: Down-Up-Down |
ARF6 | 0.962 | 0.962 | - | - | - | - | - | Mlig455_042989 {REF} {Length: 1208} {TRANSSPLICED} {Pfam: ADP-ribosylation factor family [PF00025.23, score=111.5]; Signal recognition particle receptor beta subunit [PF09439.12, score=22.3]; 6-phosphofructo-2-kinase [PF01591.20, score=18.8]} {Human: ENSG00000165527, ARF6, ADP ribosylation factor 6, [Score=148, Expect=7e-46]} {Mouse: ENSMUSG00000044147, Arf6, ADP-ribosylation factor 6, [Score=148, Expect=5e-46]} {Dmel: FBgn0013750, Arf51F, ADP ribosylation factor at 51F, [Score=149, Expect=1e-46]} {Celegans: WBGene00000184, arf-6, ADP-Ribosylation Factor related, [Score=142, Expect=7e-44]} {Smed: dd_Smed_v6_2125_0_1, dd_Smed_v6_2125_0_1, [Score=135, Expect=2e-41]} {RNA1509_12815} {RNA1310_25955} {RNA815_11670.2} |
9. | MligTC455_24364 | 1684 | 35.08 | Mlig455_065697 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.958 Region-enriched R5: 1.621/0.00717 |
0.961 | - | - | - | 0.961 | - | - | Mlig455_065697 {REF} {Length: 4990} {NoTransDecoderORF} {RNA1509_44447, RNA1509_54838} {RNA1310_73082, RNA1509_44447, RNA1509_54838} {RNA1509_44447, RNA1509_54838, RNA815_5272.1} | |
10. | MligTC455_37863 | 213 | 4.44 | Mlig455_015363 | Neo: - Age: Up-Down-Down |
NBAS | 0.96 | 0.960 | - | - | - | - | - | Mlig455_015363 {REF} {Length: 8517} {TRANSSPLICED} {Pfam: Secretory pathway protein Sec39 [PF08314.13, score=51.4]; Neuroblastoma-amplified sequence, N terminal [PF15492.8, score=33.5]} {Human: ENSG00000151779, NBAS, neuroblastoma amplified sequence, [RH, Score=384, Expect=1e-106]} {Mouse: ENSMUSG00000020576, Nbas, neuroblastoma amplified sequence, [RH, Score=413, Expect=6e-116]} {Celegans: WBGene00008990, smgl-1, [RH, Score=55.5, Expect=5e-07]} {Smed: dd_Smed_v6_7998_0_1, dd_Smed_v6_7998_0_1, [RH, Score=206, Expect=1e-52]} {RNA1509_11685, RNA1509_55641} {RNA1310_353.1, RNA1509_11685, RNA1509_55641} {RNA1509_11685, RNA1509_55641, RNA815_138} |
11. | MligTC455_50933 | 280 | 5.83 | Mlig455_011495 | Neo: - Age: Down-Down-Up |
0.959 | 0.959 | - | - | - | - | - | Mlig455_011495 {REF} {Length: 3671} {TRANSSPLICED} {RNA1509_11429} {RNA1310_2886.1} {RNA815_8254} | |
12. | MligTC455_39850 | 188 | 3.91 | Mlig455_049688 | Neo: Germline Age: Up-Down-Down Region-enriched R4: 2.276/0.03369 |
NUB1 | 0.958 | - | - | 0.958 | - | - | - | Mlig455_049688 {REF} {Length: 3207} {TRANSSPLICED} {Pfam: UBA/TS-N domain [PF00627.33, score=47.4]; Ubiquitin-like domain [PF18037.3, score=31.6]; Ubiquitin family [PF00240.25, score=20.2]} {Human: ENSG00000013374, NUB1, negative regulator of ubiquitin like proteins 1, [Score=186, Expect=3e-50]} {Mouse: ENSMUSG00000028954, Nub1, negative regulator of ubiquitin-like proteins 1, [Score=180, Expect=3e-48]} {Dmel: FBgn0039343, CG5111, [Score=256, Expect=4e-76]} {Smed: dd_Smed_v6_3402_0_1, dd_Smed_v6_3402_0_1, [RH, Score=174, Expect=8e-47]} {RNA1509_17867, RNA1509_9830} {RNA1310_7816.2, RNA1509_17867, RNA1509_9830} {RNA1509_17867, RNA1509_9830, RNA815_3803} |
13. | MligTC455_42905 | 167 | 3.47 | Mlig455_065723 | Neo: - Age: - |
0.956 | - | - | 0.956 | - | - | - | Mlig455_065723 {REF} {Length: 2074} {RNA1509_32583} {RNA1310_64164} {RNA815_35135.1} | |
14. | MligTC455_46097 | 66 | 1.38 | Mlig455_066528 | Neo: - Age: logFC(26M/2M)=0.553 |
0.956 | 0.956 | - | - | - | - | - | Mlig455_066528 {REF} {Length: 1956} {TRANSSPLICED} {Pfam: MORN repeat [PF02493.22, score=28.4]} {RNA1509_5700} {RNA1310_28408} {RNA815_19918} | |
15. | MligTC455_39693 | 41 | 0.86 | Mlig455_063193 | Neo: - Age: Up-Down-Down |
MTCL1 | 0.955 | 0.955 | - | - | - | - | - | Mlig455_063193 {REF} {Length: 6739} {Pfam: Protein SOGA [PF11365.10, score=34.5]; Chromatin assembly factor 1 complex p150 subunit, N-terminal [PF11600.10, score=21.5]; Myosin-like coiled-coil protein [PF09728.11, score=20.0]; Growth-arrest specific micro-tubule binding [PF13851.8, score=19.9]; TPR/MLP1/MLP2-like protein [PF07926.14, score=19.6]; Fez1 [PF06818.17, score=19.3]} {Human: ENSG00000168502, MTCL1, microtubule crosslinking factor 1, [RH, Score=102, Expect=6e-21]; ENSG00000149639, SOGA1, suppressor of glucose, autophagy associated 1, [RH, Score=101, Expect=1e-20]} {Mouse: ENSMUSG00000055485, Soga1, suppressor of glucose, autophagy associated 1, [RH, Score=109, Expect=2e-23]; ENSMUSG00000052105, Mtcl1, microtubule crosslinking factor 1, [RH, Score=108, Expect=7e-23]} {Dmel: FBgn0031869, CG18304, [RH, Score=89.7, Expect=2e-17]} {Celegans: WBGene00044079, tag-241, [Score=143, Expect=5e-34]} {Smed: dd_Smed_v6_2373_0_2, dd_Smed_v6_2373_0_2, [Score=322, Expect=7e-89]} {RNA1509_19671} {RNA1310_1157, RNA1509_19671} {RNA1509_19671, RNA815_16429} |
16. | MligTC455_13555 | 95 | 1.97 | Mlig455_019079 | Neo: Int S/G2/M Age: - |
COA7 | 0.954 | 0.954 | - | - | - | - | - | Mlig455_019079 {REF} {Length: 1418} {Pfam: Sel1 repeat [PF08238.14, score=23.3]} {Human: ENSG00000162377, COA7, cytochrome c oxidase assembly factor 7 (putative), [Score=48.9, Expect=2e-06]} {Mouse: ENSMUSG00000048351, Coa7, cytochrome c oxidase assembly factor 7, [Score=46.6, Expect=1e-05]} {Dmel: FBgn0039965, CG13865, [RH, Score=66.2, Expect=2e-12]} {RNA1509_45906} {RNA1310_37650.1} {RNA815_47606} |
17. | MligTC455_14986 | 48 | 1.01 | Mlig455_003695, Mlig455_003899 | Neo: - Age: - |
0.954 | 0.954 | - | - | - | - | - | Mlig455_003695 {REF} {Length: 897} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_85928} Mlig455_003899 {REF} {Length: 107} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_85928} |
|
18. | MligTC455_50880 | 62 | 1.29 | Mlig455_030024 | Neo: - Age: Up-Down-Down |
0.953 | 0.953 | - | - | - | - | - | Mlig455_030024 {REF} {Length: 1372} {NoTransDecoderORF} {RNA1509_52070} {RNA1310_36138.2} {RNA815_52876} | |
19. | MligTC455_33759 | 388 | 8.09 | Mlig455_016906 | Neo: - Age: - |
ZNF28 | 0.952 | 0.952 | - | - | - | - | - | Mlig455_016906 {REF} {Length: 2132} {TRANSSPLICED} {Pfam: Zinc-finger double domain [PF13465.8, score=98.9]; C2H2-type zinc finger [PF13894.8, score=66.8]; Zinc finger, C2H2 type [PF00096.28, score=65.0]; C2H2-type zinc finger [PF13912.8, score=36.8]; Zinc-finger of C2H2 type [PF12874.9, score=29.8]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=23.2]; Zinc ribbon domain [PF09723.12, score=22.5]; BED zinc finger [PF02892.17, score=22.1]; Zinc-finger domain [PF10276.11, score=21.6]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=20.7]} {Human: ENSG00000198538, ZNF28, zinc finger protein 28, [Score=155, Expect=6e-43]; ENSG00000278091, ZNF85, zinc finger protein 85, [Score=153, Expect=2e-42]; ENSG00000233757, AC092835.1, novel C2H2 type zinc finger protein, [Score=153, Expect=1e-42]; ENSG00000159917, ZNF235, zinc finger protein 235, [Score=152, Expect=1e-41]; ENSG00000136866, ZFP37, ZFP37 zinc finger protein, [Score=152, Expect=7e-42]; ENSG00000184635, ZNF93, zinc finger protein 93, [Score=152, Expect=1e-41]; ENSG00000105750, ZNF85, zinc finger protein 85, [Score=152, Expect=2e-42]; ENSG00000213793, ZNF888, zinc finger protein 888, [Score=151, Expect=3e-41]; ENSG00000018869, ZNF582, zinc finger protein 582, [Score=149, Expect=4e-41]; ENSG00000197863, ZNF790, zinc finger protein 790, [Score=149, Expect=2e-40]; ENSG00000198453, ZNF568, zinc finger protein 568, [Score=149, Expect=2e-42]; ENSG00000188283, ZNF383, zinc finger protein 383, [Score=148, Expect=3e-41]; ENSG00000167562, ZNF701, zinc finger protein 701, [Score=148, Expect=3e-41]; ENSG00000196081, ZNF724, zinc finger protein 724, [Score=148, Expect=2e-40]} {Mouse: ENSMUSG00000028389, Zfp37, zinc finger protein 37, [Score=151, Expect=9e-42]; ENSMUSG00000047603, Zfp235, zinc finger protein 235, [Score=148, Expect=2e-40]; ENSMUSG00000067942, Zfp160, zinc finger protein 160, [Score=146, Expect=1e-39]; ENSMUSG00000099689, Zfp383, zinc finger protein 383, [Score=145, Expect=4e-40]; ENSMUSG00000063894, Zkscan8, zinc finger with KRAB and SCAN domains 8, [Score=145, Expect=7e-40]; ENSMUSG00000074733, Zfp950, zinc finger protein 950, [Score=144, Expect=3e-39]; ENSMUSG00000011427, Zfp790, zinc finger protein 790, [Score=144, Expect=5e-39]; ENSMUSG00000078768, Zfp566, zinc finger protein 566, [Score=144, Expect=2e-40]} {Dmel: FBgn0051632, sens-2, senseless-2, [Score=134, Expect=2e-35]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [Score=117, Expect=7e-31]} {Smed: dd_Smed_v6_14824_0_1, dd_Smed_v6_14824_0_1, [Score=127, Expect=9e-35]} {RNA1509_12248} {RNA1310_24454} {RNA815_26833} |
20. | MligTC455_33205 | 24 | 0.49 | Mlig455_058439 | Neo: - Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_058439 {REF} {Length: 1078} | |
21. | MligTC455_52319 | 228 | 4.76 | Mlig455_021474, Mlig455_063234, Mlig455_067359 | Neo: - Age: Down-Up-Down Region-enriched R4: 3.056/0.03841 |
0.951 | 0.951 | - | - | - | - | - | Mlig455_021474 {REF} {Length: 1135} {RNA1509_6241} {RNA1310_26979} {RNA815_23904} Mlig455_063234 {REF} {Length: 915} {RNA1509_6241} {RNA1310_26979} {RNA815_23904} Mlig455_067359 {REF} {Length: 794} {RNA1310_26979} {RNA815_23904} |
|
22. | MligTC455_52728 | 106 | 2.22 | Mlig455_070290 | Neo: - Age: - |
0.95 | 0.950 | - | - | - | - | - | Mlig455_070290 {REF} {Length: 1652} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=55.7]; TcdA/TcdB catalytic glycosyltransferase domain [PF12919.9, score=18.2]} {Smed: dd_Smed_v6_6819_0_1, dd_Smed_v6_6819_0_1, [Score=128, Expect=4e-34]} {RNA1509_41314} {RNA1310_26265} {RNA815_9728} |