Data search


search
Exact
Search

Results for MligTC455_18664

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_18664 91 1.89 Mlig455_053403

Neo: -

Age: -

TMX3 Mlig455_053403 {REF} {Length: 2667} {TRANSSPLICED} {Human: ENSG00000166479, TMX3, thioredoxin related transmembrane protein 3, [Score=91.7, Expect=3e-19]} {Mouse: ENSMUSG00000024614, Tmx3, thioredoxin-related transmembrane protein 3, [Score=96.3, Expect=7e-21]} {Dmel: FBgn0036579, CG5027, [Score=106, Expect=2e-24]} {Celegans: WBGene00022836, ZK973.11, [Score=104, Expect=4e-24]} {Smed: dd_Smed_v6_10003_0_1, dd_Smed_v6_10003_0_1, [Score=144, Expect=1e-37]} {RNA1310_125165}

Cumulative graph for MligTC455_18664

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.602 1.734 0.51997 1.00000
RegionR2 0.684 1.734 0.62648 0.96837
RegionR3 -0.984 1.734 0.99296 1.00000
RegionR4 1.937 1.734 0.14493 0.39087
RegionR5 -0.984 1.734 0.99449 1.00000
RegionR6 0.06 1.734 0.84811 1.00000
RegionR7 0.583 1.734 0.68795 1.00000
RegionR8 2.306 1.734 0.22862 0.84047

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.742 1.734 1.00000 1.00000
RegenerationR2 0.251 1.734 0.81254 0.99381
RegenerationR3 1.805 1.734 0.17641 0.61203
RegenerationR4 -1.166 1.734 0.30200 0.74388
RegenerationR5 2.632 1.734 0.03342 0.30434
RegenerationR6 1.307 1.734 0.32225 0.66849
RegenerationBL 0.661 1.734 0.61310 0.95762
RegenerationTP 0.243 1.734 0.89159 1.00000


Genes with expression patterns similar to MligTC455_18664

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_18664 91 1.89 Mlig455_053403

Neo: -

Age: -

TMX3 4 - - 1.000 1.000 1.000 1.000 Mlig455_053403 {REF} {Length: 2667} {TRANSSPLICED} {Human: ENSG00000166479, TMX3, thioredoxin related transmembrane protein 3, [Score=91.7, Expect=3e-19]} {Mouse: ENSMUSG00000024614, Tmx3, thioredoxin-related transmembrane protein 3, [Score=96.3, Expect=7e-21]} {Dmel: FBgn0036579, CG5027, [Score=106, Expect=2e-24]} {Celegans: WBGene00022836, ZK973.11, [Score=104, Expect=4e-24]} {Smed: dd_Smed_v6_10003_0_1, dd_Smed_v6_10003_0_1, [Score=144, Expect=1e-37]} {RNA1310_125165}
2. MligTC455_19089 645 13.43 Mlig455_002210

Neo: -

Age: -

Region-enriched R7: 2.068/0.03789

MEGF6 0.967 - - - - 0.967 - Mlig455_002210 {REF} {Length: 7790} {Pfam: Coagulation Factor Xa inhibitory site [PF14670.8, score=117.5]; Laminin EGF domain [PF00053.26, score=111.7]; Calcium-binding EGF domain [PF07645.17, score=84.0]; Complement Clr-like EGF-like [PF12662.9, score=74.8]; PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=41.3]; Human growth factor-like EGF [PF12661.9, score=21.3]; Tight junction protein, Claudin-like [PF06653.13, score=20.1]; EGF domain [PF12947.9, score=19.0]} {Human: ENSG00000162591, MEGF6, multiple EGF like domains 6, [RH, Score=974, Expect=0.0]} {Mouse: ENSMUSG00000057751, Megf6, multiple EGF-like-domains 6, [RH, Score=1023, Expect=0.0]} {Dmel: FBgn0027594, drpr, draper, [RH, Score=446, Expect=1e-133]} {Celegans: WBGene00013416, Y64G10A.7, [RH, Score=1100, Expect=0.0]} {Smed: dd_Smed_v6_5630_0_1, dd_Smed_v6_5630_0_1, [Score=758, Expect=0.0]} {RNA1509_42688} {RNA1310_2807} {RNA815_1132}
3. MligTC455_29185 49 1.02 Mlig455_061775

Neo: -

Age: -

0.966 - - - - - 0.966 Mlig455_061775 {REF} {Length: 2406} {Dmel: FBgn0029807, CG3108, [Score=48.5, Expect=5e-06]} {RNA1509_9867} {RNA1310_20135} {RNA815_212.1}
4. MligTC455_38926 75 1.56 Mlig455_036654

Neo: -

Age: -

0.962 - - 0.962 - - - Mlig455_036654 {REF} {Length: 654} {TRANSSPLICED} {RNA1509_25556} {RNA1310_11387.2} {RNA815_48752}
5. MligTC455_39766 175 3.66 Mlig455_047720

Neo: Germline

Age: Up-Down-Down

0.961 - - 0.961 - - - Mlig455_047720 {REF} {Length: 5216} {NoTransDecoderORF} {RNA1509_22260} {RNA1310_4827.1} {RNA815_20146}
6. MligTC455_40223 172 3.59 Mlig455_016264

Neo: -

Age: -

Region-enriched R8: 3.704/0.01076

CHRNA10 0.959 - - 0.959 - - - Mlig455_016264 {REF} {Length: 4782} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=169.5]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=109.0]} {Human: ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=230, Expect=2e-68]; ENSG00000147432, CHRNB3, cholinergic receptor nicotinic beta 3 subunit, [Score=225, Expect=1e-66]} {Mouse: ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=233, Expect=9e-70]} {Dmel: FBgn0032151, nAChRalpha6, nicotinic Acetylcholine Receptor alpha6, [Score=236, Expect=2e-70]} {Celegans: WBGene00000060, acr-21, AcetylCholine Receptor, [Score=215, Expect=6e-63]} {Smed: dd_Smed_v6_31300_0_1, dd_Smed_v6_31300_0_1, [Score=280, Expect=9e-87]} {RNA1509_35668} {RNA1310_11720.1} {RNA815_6827}
7. MligTC455_29183 126 2.63 Mlig455_007170, Mlig455_049710, Mlig455_050674

Neo: -

Age: -

0.958 - - - - - 0.958

Mlig455_007170 {REF} {Length: 1811} {RNA1509_57258} {RNA1310_50886} {RNA815_31604}

Mlig455_049710 {REF} {Length: 1939} {Dmel: FBgn0029807, CG3108, [Score=48.9, Expect=7e-06]} {RNA1509_13531} {RNA1310_58438} {RNA815_212.1}

Mlig455_050674 {REF} {Length: 2470} {Dmel: FBgn0029807, CG3108, [Score=63.2, Expect=2e-10]} {RNA1509_13531} {RNA1310_20135} {RNA815_212.1}
8. MligTC455_08806 2763 57.56 Mlig455_057579

Neo: -

Age: -

TMEM87A 0.955 - - - - 0.955 - Mlig455_057579 {REF} {Length: 4692} {TRANSSPLICED} {Pfam: Lung seven transmembrane receptor [PF06814.15, score=316.2]} {Human: ENSG00000103978, TMEM87A, transmembrane protein 87A, [RH, Score=380, Expect=2e-124]; ENSG00000153214, TMEM87B, transmembrane protein 87B, [RH, Score=379, Expect=4e-124]} {Mouse: ENSMUSG00000014353, Tmem87b, transmembrane protein 87B, [RH, Score=389, Expect=3e-128]; ENSMUSG00000033808, Tmem87a, transmembrane protein 87A, [RH, Score=381, Expect=5e-125]} {Dmel: FBgn0031356, CG17660, [RH, Score=409, Expect=3e-136]} {Celegans: WBGene00016867, C52B9.4, [RH, Score=381, Expect=2e-125]} {Smed: dd_Smed_v6_2521_0_1, dd_Smed_v6_2521_0_1, [RH, Score=325, Expect=2e-104]} {RNA1509_12127, RNA1509_4602, RNA1509_4647, RNA1509_49080, RNA1509_55629} {RNA1310_11822.1, RNA1509_12127, RNA1509_4602, RNA1509_4647, RNA1509_49080, RNA1509_55629} {RNA1509_12127, RNA1509_4602, RNA1509_4647, RNA1509_49080, RNA1509_55629, RNA815_421.1}
9. MligTC455_29287 675 14.06 Mlig455_049797

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=0.343

RRBP1 0.955 - - 0.955 - - - Mlig455_049797 {REF} {Length: 4084} {TRANSSPLICED} {Human: ENSG00000125844, RRBP1, ribosome binding protein 1, [Score=57.8, Expect=1e-07]; ENSG00000126777, KTN1, kinectin 1, [Score=56.2, Expect=3e-07]} {Mouse: ENSMUSG00000027422, Rrbp1, ribosome binding protein 1, [Score=60.1, Expect=1e-08]} {Smed: dd_Smed_v6_1111_0_1, dd_Smed_v6_1111_0_1, [RH, Score=103, Expect=1e-22]} {RNA1509_11298} {RNA1310_4678} {RNA815_2519}
10. MligTC455_23371 101 2.11 Mlig455_006907

Neo: -

Age: Down-Up-Down

Region-enriched R8: 3.403/0.01276

FSTL1 0.952 - - 0.952 - - - Mlig455_006907 {REF} {Length: 3700} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=60.0]; Immunoglobulin domain [PF13927.8, score=59.2]; Kazal-type serine protease inhibitor domain [PF07648.17, score=42.0]; Immunoglobulin domain [PF13895.8, score=33.6]; Immunoglobulin domain [PF00047.27, score=32.3]; Kazal-type serine protease inhibitor domain [PF00050.23, score=28.7]; Immunoglobulin V-set domain [PF07686.19, score=27.7]} {Human: ENSG00000163430, FSTL1, follistatin like 1, [RH, Score=68.9, Expect=3e-13]} {Mouse: ENSMUSG00000022816, Fstl1, follistatin-like 1, [RH, Score=68.2, Expect=6e-12]} {Celegans: WBGene00004256, pxn-1, Peroxidasin homolog, [Score=51.2, Expect=3e-06]} {RNA1509_41764} {RNA1310_9313, RNA1509_41764} {RNA1509_41764, RNA815_25649}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA