TomoSeq data search

Data search

Results for MligTC455_18784

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_18784

461

9.59

Mlig455_011302, Mlig455_011391

Neo: Int S/G2/M

Age: -

CLIC6

Mlig455_011302 {REF} {Length: 1564} {Human: ENSG00000159212, CLIC6, chloride intracellular channel 6, [Score=61.2, Expect=3e-10]} {RNA1509_15142} {RNA1310_50653} {RNA815_35348}

Mlig455_011391 {REF} {Length: 1551} {Human: ENSG00000159212, CLIC6, chloride intracellular channel 6, [Score=61.2, Expect=3e-10]} {RNA1509_15142} {RNA1310_50653} {RNA815_35348}

Cumulative graph for MligTC455_18784

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.857	3.691	0.51784	1.00000
RegionR2	-0.294	3.691	0.67436	1.00000
RegionR3	-0.382	3.691	0.51040	0.99916
RegionR4	0.067	3.691	0.91563	1.00000
RegionR5	0.222	3.691	0.66250	1.00000
RegionR6	0.388	3.691	0.49155	1.00000
RegionR7	-0.135	3.691	0.85515	1.00000
RegionR8	-0.724	3.691	0.48825	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-7.325	3.691	0.08392	0.78241
RegenerationR2	0.356	3.691	0.54656	0.89106
RegenerationR3	0.968	3.691	0.14173	0.56779
RegenerationR4	0.967	3.691	0.13991	0.56153
RegenerationR5	1.34	3.691	0.02318	0.26165
RegenerationR6	0.661	3.691	0.28961	0.63986
RegenerationBL	0.591	3.691	0.43742	0.80511
RegenerationTP	0.271	3.691	0.75184	1.00000

Genes with expression patterns similar to MligTC455_18784

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_18784	461	9.59	Mlig455_011302, Mlig455_011391	Neo: Int S/G2/M Age: -	CLIC6	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_011302 {REF} {Length: 1564} {Human: ENSG00000159212, CLIC6, chloride intracellular channel 6, [Score=61.2, Expect=3e-10]} {RNA1509_15142} {RNA1310_50653} {RNA815_35348} Mlig455_011391 {REF} {Length: 1551} {Human: ENSG00000159212, CLIC6, chloride intracellular channel 6, [Score=61.2, Expect=3e-10]} {RNA1509_15142} {RNA1310_50653} {RNA815_35348}
2.	MligTC455_24403	293	6.11	Mlig455_002756	Neo: Irradiation Age: -	ATAD2B	1.827	-	-	0.863	-	-	0.964	Mlig455_002756 {REF} {Length: 5381} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=147.5]; Bromodomain [PF00439.27, score=48.1]; AAA+ lid domain [PF17862.3, score=36.2]; AAA domain (Cdc48 subfamily) [PF07724.16, score=22.9]; AAA ATPase domain [PF13191.8, score=22.0]} {Human: ENSG00000119778, ATAD2B, ATPase family, AAA domain containing 2B, [RH, Score=694, Expect=0.0]} {Mouse: ENSMUSG00000052812, Atad2b, ATPase family, AAA domain containing 2B, [RH, Score=668, Expect=0.0]; ENSMUSG00000116053, Atad2, ATPase family, AAA domain containing 2, [RH, Score=652, Expect=0.0]; ENSMUSG00000022360, Atad2, ATPase family, AAA domain containing 2, [RH, Score=652, Expect=0.0]} {Dmel: FBgn0261014, TER94, [Score=230, Expect=2e-62]} {Celegans: WBGene00008682, lex-1, Tat-binding homolog 7, [RH, Score=513, Expect=5e-160]} {Smed: dd_Smed_v6_8534_0_1, dd_Smed_v6_8534_0_1, [RH, Score=522, Expect=1e-164]} {RNA1509_47976} {RNA1310_2482.1} {RNA815_17171}
3.	MligTC455_48222	885	18.44	Mlig455_031424, Mlig455_056469	Neo: - Age: Down-Up-Up	GFER	1.771	-	-	-	0.808	-	0.963	Mlig455_031424 {REF} {Length: 1606} {TRANSSPLICED} {Pfam: Erv1 / Alr family [PF04777.15, score=104.4]} {Human: ENSG00000127554, GFER, growth factor, augmenter of liver regeneration, [RH, Score=147, Expect=2e-44]} {Mouse: ENSMUSG00000040888, Gfer, growth factor, augmenter of liver regeneration, [RH, Score=139, Expect=2e-41]} {Dmel: FBgn0031068, Alr, Augmenter of liver regeneration, [RH, Score=134, Expect=6e-39]} {Celegans: WBGene00018955, F56C11.3, Sulfhydryl oxidase, [RH, Score=140, Expect=1e-42]} {Smed: dd_Smed_v6_9440_0_1, dd_Smed_v6_9440_0_1, [RH, Score=160, Expect=8e-51]} {RNA1509_41230} {RNA1310_32417.1} {RNA815_24929} Mlig455_056469 {REF} {Length: 1066} {TRANSSPLICED} {Pfam: Erv1 / Alr family [PF04777.15, score=104.3]} {Human: ENSG00000127554, GFER, growth factor, augmenter of liver regeneration, [RH, Score=149, Expect=5e-45]} {Mouse: ENSMUSG00000040888, Gfer, growth factor, augmenter of liver regeneration, [RH, Score=139, Expect=2e-41]} {Dmel: FBgn0031068, Alr, Augmenter of liver regeneration, [RH, Score=132, Expect=5e-38]} {Celegans: WBGene00018955, F56C11.3, Sulfhydryl oxidase, [RH, Score=140, Expect=2e-42]} {Smed: dd_Smed_v6_9440_0_1, dd_Smed_v6_9440_0_1, [RH, Score=161, Expect=6e-51]} {RNA1509_19287, RNA1509_41230} {RNA1310_32417.1, RNA1509_19287, RNA1509_41230} {RNA1509_19287, RNA1509_41230, RNA815_24929}
4.	MligTC455_51185	1073	22.36	Mlig455_031371, Mlig455_056513	Neo: - Age: Up-Down-Down Region-enriched R5: 1.008/0.01615	PLEKHG1	1.768	-	-	0.803	-	-	0.965	Mlig455_031371 {REF} {Length: 5976} {TRANSSPLICED} {Pfam: RhoGEF domain [PF00621.22, score=136.8]} {Human: ENSG00000120278, PLEKHG1, pleckstrin homology and RhoGEF domain containing G1, [RH, Score=241, Expect=6e-64]; ENSG00000126822, PLEKHG3, pleckstrin homology and RhoGEF domain containing G3, [RH, Score=237, Expect=4e-63]} {Mouse: ENSMUSG00000052609, Plekhg3, pleckstrin homology domain containing, family G (with RhoGef domain) member 3, [RH, Score=239, Expect=8e-64]} {Dmel: FBgn0050115, GEFmeso, Guanine nucleotide exchange factor in mesoderm, [RH, Score=201, Expect=6e-52]} {Celegans: WBGene00009337, uig-1, UNC-112-Interacting Guanine nucleotide exchange factor, [RH, Score=191, Expect=3e-49]} {Smed: dd_Smed_v6_4803_0_1, dd_Smed_v6_4803_0_1, [RH, Score=186, Expect=1e-48]} {RNA1509_10688} {RNA1310_1913, RNA1509_10688} {RNA1509_10688, RNA815_10599} Mlig455_056513 {REF} {Length: 5463} {TRANSSPLICED} {Pfam: RhoGEF domain [PF00621.22, score=135.4]} {Human: ENSG00000120278, PLEKHG1, pleckstrin homology and RhoGEF domain containing G1, [RH, Score=234, Expect=6e-62]; ENSG00000126822, PLEKHG3, pleckstrin homology and RhoGEF domain containing G3, [RH, Score=232, Expect=2e-61]} {Mouse: ENSMUSG00000052609, Plekhg3, pleckstrin homology domain containing, family G (with RhoGef domain) member 3, [RH, Score=233, Expect=6e-62]} {Dmel: FBgn0050115, GEFmeso, Guanine nucleotide exchange factor in mesoderm, [RH, Score=200, Expect=1e-51]} {Celegans: WBGene00009337, uig-1, UNC-112-Interacting Guanine nucleotide exchange factor, [RH, Score=187, Expect=2e-48]} {Smed: dd_Smed_v6_4803_0_1, dd_Smed_v6_4803_0_1, [RH, Score=180, Expect=1e-46]} {RNA1509_10688} {RNA1310_1913} {RNA815_10599}
5.	MligTC455_44353	469	9.78	Mlig455_066099, Mlig455_068672	Neo: - Age: -	ZER1	1.695	-	-	-	0.741	-	0.954	Mlig455_066099 {REF} {Length: 3264} {TRANSSPLICED} {Human: ENSG00000160445, ZER1, zyg-11 related cell cycle regulator, [RH, Score=147, Expect=3e-36]} {Mouse: ENSMUSG00000039686, Zer1, zyg-11 related, cell cycle regulator, [RH, Score=148, Expect=2e-36]} {Dmel: FBgn0043458, CG12084, [RH, Score=145, Expect=1e-35]} {Celegans: WBGene00020762, zer-1, Zyg eleven-related protein 1, [Score=133, Expect=9e-32]} {Smed: dd_Smed_v6_7636_0_3, dd_Smed_v6_7636_0_3, [Score=60.1, Expect=4e-09]} {RNA1509_13123} {RNA1310_3290} {RNA815_6384} Mlig455_068672 {REF} {Length: 3351} {TRANSSPLICED} {Human: ENSG00000160445, ZER1, zyg-11 related cell cycle regulator, [RH, Score=147, Expect=5e-36]} {Mouse: ENSMUSG00000039686, Zer1, zyg-11 related, cell cycle regulator, [RH, Score=147, Expect=3e-36]} {Dmel: FBgn0043458, CG12084, [RH, Score=145, Expect=1e-35]} {Celegans: WBGene00020762, zer-1, Zyg eleven-related protein 1, [Score=134, Expect=4e-32]} {Smed: dd_Smed_v6_7636_0_3, dd_Smed_v6_7636_0_3, [Score=57.4, Expect=3e-08]} {RNA1509_13123} {RNA1310_3290, RNA1509_13123} {RNA1509_13123, RNA815_6384}
6.	MligTC455_44256	289	6.02	Mlig455_019199	Neo: - Age: -		1.664	0.712	-	0.952	-	-	-	Mlig455_019199 {REF} {Length: 1379} {RNA1509_45436} {RNA1310_46798.1} {RNA815_22471}
7.	MligTC455_23431	92	1.91	Mlig455_032975	Neo: Int S/G2/M Age: - Region-enriched R4: 3.700/0.04652	SUV39H2	1.654	-	-	-	0.703	-	0.951	Mlig455_032975 {REF} {Length: 3806} {Pfam: Septin [PF00735.20, score=287.5]; SET domain [PF00856.30, score=77.6]; Pre-SET motif [PF05033.18, score=57.6]; Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=48.8]; RsgA GTPase [PF03193.18, score=32.0]; 50S ribosome-binding GTPase [PF01926.25, score=27.2]; AAA ATPase domain [PF13191.8, score=25.9]} {Human: ENSG00000152455, SUV39H2, suppressor of variegation 3-9 homolog 2, [RH, Score=269, Expect=6e-81]; ENSG00000101945, SUV39H1, suppressor of variegation 3-9 homolog 1, [RH, Score=265, Expect=2e-79]} {Mouse: ENSMUSG00000026646, Suv39h2, suppressor of variegation 3-9 2, [RH, Score=268, Expect=4e-80]; ENSMUSG00000039231, Suv39h1, suppressor of variegation 3-9 1, [RH, Score=255, Expect=6e-76]} {Dmel: FBgn0011710, Sep1, Septin 1, [Score=247, Expect=1e-73]} {Celegans: WBGene00006795, unc-61, [Score=213, Expect=2e-60]} {Smed: dd_Smed_v6_8819_0_1, dd_Smed_v6_8819_0_1, [RH, Score=328, Expect=9e-103]} {RNA1509_49875} {RNA1310_8346} {RNA815_3453}
8.	MligTC455_50727	2737	57.01	Mlig455_003804, Mlig455_033285	Neo: Int S/G2/M Age: logFC(26M/2M)=0.156	IARS	0.986	-	-	-	-	-	0.986	Mlig455_003804 {REF} {Length: 4000} {TRANSSPLICED} {Pfam: tRNA synthetases class I (I, L, M and V) [PF00133.24, score=783.6]; Anticodon-binding domain of tRNA ligase [PF08264.15, score=79.8]; Domain of unknown function (DUF5915) [PF19302.1, score=69.4]; tRNA synthetases class I (M) [PF09334.13, score=49.6]} {Human: ENSG00000196305, IARS, isoleucyl-tRNA synthetase, [RH, Score=1345, Expect=0.0]} {Mouse: ENSMUSG00000037851, Iars, isoleucine-tRNA synthetase, [RH, Score=1339, Expect=0.0]} {Dmel: FBgn0027086, IleRS, Isoleucyl-tRNA synthetase, [RH, Score=1243, Expect=0.0]} {Celegans: WBGene00002152, iars-1, Isoleucine--tRNA ligase, cytoplasmic, [RH, Score=1224, Expect=0.0]} {Smed: dd_Smed_v6_2156_0_1, dd_Smed_v6_2156_0_1, [RH, Score=1235, Expect=0.0]} {RNA1509_1946} {RNA1310_2190.1} {RNA815_648} Mlig455_033285 {REF} {Length: 4704} {TRANSSPLICED} {Pfam: tRNA synthetases class I (I, L, M and V) [PF00133.24, score=783.7]; Anticodon-binding domain of tRNA ligase [PF08264.15, score=79.6]; Domain of unknown function (DUF5915) [PF19302.1, score=68.2]; tRNA synthetases class I (M) [PF09334.13, score=49.1]; zinc-finger C2H2-type [PF16622.7, score=18.7]} {Human: ENSG00000196305, IARS, isoleucyl-tRNA synthetase, [RH, Score=1347, Expect=0.0]} {Mouse: ENSMUSG00000037851, Iars, isoleucine-tRNA synthetase, [RH, Score=1337, Expect=0.0]} {Dmel: FBgn0027086, IleRS, Isoleucyl-tRNA synthetase, [RH, Score=1248, Expect=0.0]} {Celegans: WBGene00002152, iars-1, Isoleucine--tRNA ligase, cytoplasmic, [RH, Score=1222, Expect=0.0]} {Smed: dd_Smed_v6_2156_0_1, dd_Smed_v6_2156_0_1, [RH, Score=1236, Expect=0.0]} {RNA1509_1946, RNA1509_57050} {RNA1310_2190.2, RNA1509_57050} {RNA1509_57050, RNA815_648}
9.	MligTC455_26102	81	1.68	Mlig455_036981	Neo: Irradiation Age: logFC(26M/2M)=-0.711		0.964	-	-	0.964	-	-	-	Mlig455_036981 {REF} {Length: 2593} {RNA1509_51525} {RNA1310_9237.1} {RNA815_5309}
10.	MligTC455_19542	135	2.81	Mlig455_058849	Neo: - Age: -		0.958	-	-	0.958	-	-	-	Mlig455_058849 {REF} {Length: 544} {NoTransDecoderORF} {RNA1509_26479} {RNA1310_46224} {RNA815_41591}
11.	MligTC455_09311	246	5.13	Mlig455_013248	Neo: - Age: Up-Down-Up		0.956	-	-	-	-	-	0.956	Mlig455_013248 {REF} {Length: 5296} {TRANSSPLICED} {Dmel: FBgn0265523, Smr, Smrter, [Score=60.8, Expect=3e-10]} {Smed: dd_Smed_v6_7709_0_1, dd_Smed_v6_7709_0_1, [Score=86.3, Expect=4e-19]} {RNA1509_5304} {RNA1310_3560} {RNA815_6348}
12.	MligTC455_35460	218	4.53	Mlig455_041682	Neo: Irradiation Age: -		0.954	-	-	-	-	-	0.954	Mlig455_041682 {REF} {Length: 2105} {TRANSSPLICED} {RNA1509_45996} {RNA1310_21160.1, RNA1509_45996} {RNA1509_45996, RNA815_10651.1}
13.	MligTC455_44615	349	7.28	Mlig455_013647	Neo: - Age: - Region-enriched R5: 1.203/0.00879	ERG28	0.953	-	-	-	-	-	0.953	Mlig455_013647 {REF} {Length: 2311} {TRANSSPLICED} {Pfam: Erg28 like protein [PF03694.15, score=81.5]} {Human: ENSG00000133935, ERG28, ergosterol biosynthesis 28 homolog, [RH, Score=78.6, Expect=1e-18]} {Mouse: ENSMUSG00000021252, Erg28, ergosterol biosynthesis 28, [RH, Score=77.8, Expect=2e-18]} {RNA1509_32376} {RNA1310_30496, RNA1509_32376} {RNA1509_32376, RNA815_19683}
14.	MligTC455_36659	7783	162.14	Mlig455_028222	Neo: - Age: logFC(26M/2M)=0.391 Region-enriched R5: 1.026/0.00412	SEC61G	0.952	-	-	-	-	-	0.952	Mlig455_028222 {REF} {Length: 1137} {Pfam: SecE/Sec61-gamma subunits of protein translocation complex [PF00584.22, score=56.6]} {Human: ENSG00000132432, SEC61G, Sec61 translocon gamma subunit, [RH, Score=123, Expect=1e-38]} {Mouse: ENSMUSG00000078974, Sec61g, SEC61, gamma subunit, [RH, Score=123, Expect=9e-39]} {Dmel: FBgn0033691, CG8860, [RH, Score=116, Expect=2e-36]} {Celegans: WBGene00001303, emo-1, Protein transport protein Sec61 subunit gamma, [RH, Score=117, Expect=1e-36]} {Smed: dd_Smed_v6_429_0_1, dd_Smed_v6_429_0_1, [RH, Score=122, Expect=6e-39]} {RNA1509_12796, RNA1509_14890, RNA1509_27826, RNA1509_32098, RNA1509_4784, RNA1509_9396} {RNA1310_31854, RNA1509_12796, RNA1509_14890, RNA1509_27826, RNA1509_32098, RNA1509_4784, RNA1509_9396} {RNA1509_12796, RNA1509_14890, RNA1509_27826, RNA1509_32098, RNA1509_4784, RNA1509_9396, RNA815_14284}
15.	MligTC455_17179	1116	23.26	Mlig455_036839, Mlig455_052978, Mlig455_053039	Neo: Int S/G2/M Age: -	HNRNPUL1	0.951	-	-	-	-	-	0.951	Mlig455_036839 {REF} {Length: 4658} {TRANSSPLICED} {Pfam: AAA domain [PF13671.8, score=44.1]} {Human: ENSG00000105323, HNRNPUL1, heterogeneous nuclear ribonucleoprotein U like 1, [Score=79.3, Expect=4e-14]} {Mouse: ENSMUSG00000040725, Hnrnpul1, heterogeneous nuclear ribonucleoprotein U-like 1, [Score=82.0, Expect=4e-15]} {Celegans: WBGene00012769, hrpu-1, Heterogeneous nuclear RibonucleoProtein U, [Score=56.2, Expect=2e-07]} {Smed: dd_Smed_v6_1485_0_1, dd_Smed_v6_1485_0_1, [Score=79.3, Expect=1e-14]} {RNA1509_5187} {RNA1310_10031, RNA1509_5187} {RNA1509_5187, RNA815_657.1} Mlig455_052978 {REF} {Length: 4659} {TRANSSPLICED} {Pfam: AAA domain [PF13671.8, score=41.0]} {Human: ENSG00000105323, HNRNPUL1, heterogeneous nuclear ribonucleoprotein U like 1, [Score=75.9, Expect=4e-13]} {Mouse: ENSMUSG00000040725, Hnrnpul1, heterogeneous nuclear ribonucleoprotein U-like 1, [Score=78.2, Expect=5e-14]} {Celegans: WBGene00012769, hrpu-1, Heterogeneous nuclear RibonucleoProtein U, [Score=53.9, Expect=1e-06]} {Smed: dd_Smed_v6_1485_0_1, dd_Smed_v6_1485_0_1, [Score=75.9, Expect=1e-13]} {RNA1509_5187} {RNA1310_10031} {RNA815_657.1} Mlig455_053039 {REF} {Length: 4638} {TRANSSPLICED} {Pfam: AAA domain [PF13671.8, score=38.1]} {Human: ENSG00000105323, HNRNPUL1, heterogeneous nuclear ribonucleoprotein U like 1, [Score=76.6, Expect=2e-13]} {Mouse: ENSMUSG00000040725, Hnrnpul1, heterogeneous nuclear ribonucleoprotein U-like 1, [Score=77.0, Expect=1e-13]} {Celegans: WBGene00006820, unc-89, Muscle M-line assembly protein unc-89, [Score=72.0, Expect=3e-12]} {Smed: dd_Smed_v6_1485_0_1, dd_Smed_v6_1485_0_1, [Score=75.1, Expect=3e-13]} {RNA1509_5187} {RNA1310_10031} {RNA815_657.1}
16.	MligTC455_33454	464	9.67	Mlig455_036962, Mlig455_069816	Neo: - Age: Down-Up-Down		0.951	-	-	0.951	-	-	-	Mlig455_036962 {REF} {Length: 2292} {Pfam: Glycosyltransferase family 87 [PF09594.12, score=21.6]; Protein melan-A [PF14991.8, score=21.4]; Ephrin type-A receptor 2 transmembrane domain [PF14575.8, score=20.7]; Domain of unknown function (DUF4381) [PF14316.8, score=20.2]} {RNA1509_36524} {RNA1310_29115.2} {RNA815_12947.1} Mlig455_069816 {REF} {Length: 1681} {Pfam: Glycosyltransferase family 87 [PF09594.12, score=19.7]; Ephrin type-A receptor 2 transmembrane domain [PF14575.8, score=19.5]} {RNA1509_36524} {RNA1310_29115.2} {RNA815_12947.1}
17.	MligTC455_37434	76	1.59	Mlig455_017706	Neo: - Age: -	LRFN4	0.95	-	-	-	0.950	-	-	Mlig455_017706 {REF} {Length: 6032} {Pfam: Leucine rich repeat [PF13855.8, score=88.2]; Leucine Rich repeats (2 copies) [PF12799.9, score=68.3]; Leucine Rich Repeat [PF00560.35, score=24.8]; Leucine Rich repeat [PF13516.8, score=21.0]} {Human: ENSG00000173621, LRFN4, leucine rich repeat and fibronectin type III domain containing 4, [Score=59.3, Expect=4e-08]; ENSG00000137507, LRRC32, leucine rich repeat containing 32, [Score=57.8, Expect=1e-07]} {Mouse: ENSMUSG00000032913, Lrig2, leucine-rich repeats and immunoglobulin-like domains 2, [Score=72.4, Expect=4e-12]} {Dmel: FBgn0039728, CG7896, [Score=63.5, Expect=2e-09]} {Celegans: WBGene00015646, mlt-10, [Score=144, Expect=4e-35]} {Smed: dd_Smed_v6_9666_0_1, dd_Smed_v6_9666_0_1, [Score=58.5, Expect=2e-08]} {RNA1509_18335} {RNA1310_2163} {RNA815_1222}

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