Data search
Results for MligTC455_43392
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_43392 | 90 | 1.88 | Mlig455_055609 | Neo: - Age: - Region-enriched R4: 3.592/0.03736 |
Mlig455_055609 {REF} {Length: 3000} {TRANSSPLICED} {Mouse: ENSMUSG00000002343, Armc6, armadillo repeat containing 6, [RH, Score=120, Expect=3e-29]} {Dmel: FBgn0034315, CG5721, [RH, Score=113, Expect=7e-27]} {Smed: dd_Smed_v6_1357_0_1, dd_Smed_v6_1357_0_1, [RH, Score=147, Expect=8e-39]} {RNA1509_31191} {RNA1310_17098.1} {RNA815_7466} |
Cumulative graph for MligTC455_43392
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -3.163 | 1.907 | 0.99965 | 1.00000 | |
| RegionR2 | 1.912 | 1.907 | 0.17310 | 0.51994 | |
| RegionR3 | 1.786 | 1.907 | 0.14805 | 0.65383 | |
| RegionR4 | 3.592 | 1.907 | 0.00519 | 0.03736 | |
| RegionR5 | 2.789 | 1.907 | 0.00887 | 0.05295 | |
| RegionR6 | 0.788 | 1.907 | 0.47924 | 1.00000 | |
| RegionR7 | -3.701 | 1.907 | 0.99979 | 1.00000 | |
| RegionR8 | -4.004 | 1.907 | 0.99983 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.199 | 1.907 | 1.00000 | 1.00000 | |
| RegenerationR2 | 0.909 | 1.907 | 0.21358 | 0.66081 | |
| RegenerationR3 | 1.652 | 1.907 | 0.07003 | 0.44380 | |
| RegenerationR4 | -0.048 | 1.907 | 0.94892 | 1.00000 | |
| RegenerationR5 | 1.058 | 1.907 | 0.16019 | 0.58352 | |
| RegenerationR6 | 1.838 | 1.907 | 0.09776 | 0.38910 | |
| RegenerationBL | 3.77 | 1.907 | 0.06180 | 0.28883 | |
| RegenerationTP | 4.754 | 1.907 | 0.05895 | 0.39333 |
Genes with expression patterns similar to MligTC455_43392
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_43392 | 90 | 1.88 | Mlig455_055609 | Neo: - Age: - Region-enriched R4: 3.592/0.03736 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_055609 {REF} {Length: 3000} {TRANSSPLICED} {Mouse: ENSMUSG00000002343, Armc6, armadillo repeat containing 6, [RH, Score=120, Expect=3e-29]} {Dmel: FBgn0034315, CG5721, [RH, Score=113, Expect=7e-27]} {Smed: dd_Smed_v6_1357_0_1, dd_Smed_v6_1357_0_1, [RH, Score=147, Expect=8e-39]} {RNA1509_31191} {RNA1310_17098.1} {RNA815_7466} | |
| 2. | MligTC455_48894 | 109 | 2.27 | Mlig455_039096 | Neo: - Age: Down-Up-Down |
0.97 | - | - | - | 0.970 | - | - | Mlig455_039096 {REF} {Length: 3451} {TRANSSPLICED} {Pfam: Pectinacetylesterase [PF03283.15, score=169.9]} {RNA1509_20436} {RNA1310_16195.1} {RNA815_9150} | |
| 3. | MligTC455_40465 | 165 | 3.45 | Mlig455_012477 | Neo: Irradiation Age: - |
INTS6 | 0.969 | - | - | 0.969 | - | - | - | Mlig455_012477 {REF} {Length: 4658} {TRANSSPLICED} {Pfam: von Willebrand factor type A domain [PF13519.8, score=61.6]} {Human: ENSG00000102786, INTS6, integrator complex subunit 6, [RH, Score=599, Expect=0.0]; ENSG00000165359, INTS6L, integrator complex subunit 6 like, [RH, Score=586, Expect=0.0]} {Mouse: ENSMUSG00000035161, Ints6, integrator complex subunit 6, [RH, Score=598, Expect=0.0]} {Dmel: FBgn0261383, IntS6, Integrator 6, [RH, Score=457, Expect=7e-143]} {Celegans: WBGene00000994, dic-1, DICE1 (Deleted In Cancer) homolog, [RH, Score=215, Expect=4e-58]} {Smed: dd_Smed_v6_11019_0_1, dd_Smed_v6_11019_0_1, [RH, Score=476, Expect=3e-155]} {RNA1509_16366} {RNA1310_4525} {RNA815_19797} |
| 4. | MligTC455_27063 | 74 | 1.54 | Mlig455_019209 | Neo: - Age: - |
0.966 | - | - | 0.966 | - | - | - | Mlig455_019209 {REF} {Length: 481} {NoTransDecoderORF} {RNA1509_44223} {RNA1310_99471} {RNA815_64986} | |
| 5. | MligTC455_39857 | 27 | 0.55 | Mlig455_037127 | Neo: - Age: Down-Down-Down |
NECAB1 | 0.966 | - | - | 0.966 | - | - | - | Mlig455_037127 {REF} {Length: 1710} {Pfam: EF-hand domain [PF13405.8, score=34.9]; EF hand [PF00036.34, score=33.1]; EF-hand domain pair [PF13499.8, score=27.6]; EF-hand domain pair [PF13833.8, score=27.3]; Antibiotic biosynthesis monooxygenase [PF03992.18, score=25.2]; EF hand [PF13202.8, score=23.2]} {Human: ENSG00000123119, NECAB1, N-terminal EF-hand calcium binding protein 1, [Score=186, Expect=7e-55]} {Mouse: ENSMUSG00000040536, Necab1, N-terminal EF-hand calcium binding protein 1, [Score=180, Expect=7e-53]} {RNA1310_5770} {RNA815_27367} |
| 6. | MligTC455_18830 | 278 | 5.79 | Mlig455_059851 | Neo: - Age: logFC(26M/2M)=0.667 Region-enriched R3: 2.687/0.00833 |
0.963 | - | - | - | 0.963 | - | - | Mlig455_059851 {REF} {Length: 795} {RNA1509_44298} {RNA1310_45814, RNA1509_44298} {RNA1509_44298, RNA815_36105} | |
| 7. | MligTC455_22034 | 231 | 4.82 | Mlig455_045938 | Neo: Irradiation Age: - |
LARP1B | 0.961 | - | - | - | 0.961 | - | - | Mlig455_045938 {REF} {Length: 6716} {TRANSSPLICED} {Pfam: La domain [PF05383.19, score=63.1]} {Human: ENSG00000138709, LARP1B, La ribonucleoprotein domain family member 1B, [Score=285, Expect=3e-81]} {Mouse: ENSMUSG00000037331, Larp1, La ribonucleoprotein domain family, member 1, [Score=328, Expect=2e-95]} {Dmel: FBgn0261618, larp, La related protein, [Score=234, Expect=1e-63]} {Celegans: WBGene00020097, larp-1, La-related protein 1, [Score=175, Expect=2e-44]} {Smed: dd_Smed_v6_1885_0_1, dd_Smed_v6_1885_0_1, [RH, Score=218, Expect=2e-58]} {RNA1509_10711, RNA1509_13373, RNA1509_27458, RNA1509_43387, RNA1509_53542, RNA1509_57067} {RNA1310_10199.1, RNA1509_13373, RNA1509_27458, RNA1509_43387, RNA1509_53542, RNA1509_57067} {RNA1509_13373, RNA1509_27458, RNA1509_43387, RNA1509_53542, RNA1509_57067, RNA815_7521.1} |
| 8. | MligTC455_25941 | 28 | 0.59 | Mlig455_022342 | Neo: - Age: - |
0.961 | - | - | 0.961 | - | - | - | Mlig455_022342 {REF} {Length: 747} {NoTransDecoderORF} {RNA1509_41508} {RNA1310_23482} {RNA815_49293} | |
| 9. | MligTC455_15741 | 105 | 2.19 | Mlig455_039981 | Neo: - Age: Down-Up-Up |
0.96 | - | - | - | - | 0.960 | - | Mlig455_039981 {REF} {Length: 1510} {Pfam: AMP-binding enzyme [PF00501.30, score=18.9]} {RNA1509_21701} {RNA1310_34458} {RNA815_5254} | |
| 10. | MligTC455_25690 | 76 | 1.58 | Mlig455_038215 | Neo: - Age: - Region-enriched R4: 6.785/0.00109 |
ADAM10 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_038215 {REF} {Length: 6713} {Pfam: Metallo-peptidase family M12B Reprolysin-like [PF13574.8, score=90.5]; Metallo-peptidase family M12 [PF13688.8, score=75.5]; Metallo-peptidase family M12B Reprolysin-like [PF13582.8, score=58.2]; Disintegrin [PF00200.25, score=41.7]; Metallo-peptidase family M12B Reprolysin-like [PF13583.8, score=35.5]; Reprolysin family propeptide [PF01562.21, score=30.4]; Glycine rich protein family [PF07172.13, score=24.2]} {Human: ENSG00000137845, ADAM10, ADAM metallopeptidase domain 10, [Score=415, Expect=6e-132]} {Mouse: ENSMUSG00000054693, Adam10, a disintegrin and metallopeptidase domain 10, [Score=415, Expect=3e-132]} {Dmel: FBgn0259984, kuz, kuzbanian, [Score=370, Expect=7e-112]} {Celegans: WBGene00006324, sup-17, ADAM 10; SUPpressor, [Score=406, Expect=4e-127]} {Smed: dd_Smed_v6_2341_0_1, dd_Smed_v6_2341_0_1, [Score=464, Expect=2e-149]} {RNA1509_8331} {RNA1310_15245} {RNA815_3227.1} |
| 11. | MligTC455_31460 | 489 | 10.18 | Mlig455_004816, Mlig455_004883, Mlig455_004897 | Neo: - Age: - |
ATF3, JUND | 0.959 | - | - | 0.959 | - | - | - | Mlig455_004816 {REF} {Length: 4915} {TRANSSPLICED} {tRNA: Met(CAT),pseudo, score=20.4} {Pfam: bZIP transcription factor [PF00170.23, score=48.5]; Basic region leucine zipper [PF07716.17, score=32.7]; bZIP Maf transcription factor [PF03131.19, score=19.6]} {Human: ENSG00000130522, JUND, JunD proto-oncogene, AP-1 transcription factor subunit, [Score=58.5, Expect=6e-09]; ENSG00000177606, JUN, Jun proto-oncogene, AP-1 transcription factor subunit, [Score=57.4, Expect=2e-08]} {Mouse: ENSMUSG00000110974, Jund, jun D proto-oncogene, [Score=58.5, Expect=4e-09]; ENSMUSG00000071076, Jund, jun D proto-oncogene, [Score=58.5, Expect=4e-09]; ENSMUSG00000052684, Jun, jun proto-oncogene, [Score=57.0, Expect=1e-08]} {Dmel: FBgn0001297, kay, kayak, [Score=64.7, Expect=6e-11]} {RNA1509_17888} {RNA1310_24181, RNA1509_17888} {RNA1509_17888, RNA815_15830} Mlig455_004883 {REF} {Length: 4920} {TRANSSPLICED} {tRNA: Met(CAT),pseudo, score=20.4} {Pfam: bZIP transcription factor [PF00170.23, score=28.4]; Herpesvirus large structural phosphoprotein UL32 [PF06070.13, score=16.6]} {Dmel: FBgn0001297, kay, kayak, [Score=51.6, Expect=4e-07]} {RNA1509_22204} {RNA1310_24181, RNA1509_22204} {RNA1509_22204, RNA815_15830} Mlig455_004897 {REF} {Length: 2063} {tRNA: Met(CAT),pseudo, score=20.4} {Pfam: bZIP transcription factor [PF00170.23, score=44.4]; Basic region leucine zipper [PF07716.17, score=29.7]} {Human: ENSG00000162772, ATF3, activating transcription factor 3, [RH, Score=53.1, Expect=4e-08]} {Mouse: ENSMUSG00000026628, Atf3, activating transcription factor 3, [RH, Score=50.1, Expect=8e-07]} {Dmel: FBgn0001297, kay, kayak, [RH, Score=63.5, Expect=1e-10]} {RNA1509_22204} {RNA1310_24181} {RNA815_15830} |
| 12. | MligTC455_17486 | 349 | 7.26 | Mlig455_039089 | Neo: - Age: - |
0.953 | - | - | - | 0.953 | - | - | Mlig455_039089 {REF} {Length: 3290} {TRANSSPLICED} {RNA1509_19439} {RNA1310_7110.2} {RNA815_4043} | |
| 13. | MligTC455_16724 | 211 | 4.4 | Mlig455_055966 | Neo: - Age: Up-Down-Up |
PTEN | 0.951 | - | - | 0.951 | - | - | - | Mlig455_055966 {REF} {Length: 4096} {TRANSSPLICED} {Pfam: C2 domain of PTEN tumour-suppressor protein [PF10409.11, score=72.2]} {Human: ENSG00000284792, PTEN, phosphatase and tensin homolog, [Score=265, Expect=1e-81]; ENSG00000171862, PTEN, phosphatase and tensin homolog, [Score=262, Expect=9e-83]} {Mouse: ENSMUSG00000013663, Pten, phosphatase and tensin homolog, [Score=262, Expect=6e-83]} {Dmel: FBgn0026379, Pten, Phosphatase and tensin homolog, [Score=214, Expect=3e-64]} {Celegans: WBGene00000913, daf-18, Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase daf-18, [Score=147, Expect=1e-37]} {Smed: dd_Smed_v6_7478_0_1, dd_Smed_v6_7478_0_1, [RH, Score=225, Expect=6e-69]} {RNA1509_17397} {RNA1310_7531.2} {RNA815_4064} |
Berezikov Lab - 2020-2021 © ERIBA