M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_19107

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_19107 490 10.21 Mlig455_002175, Mlig455_002276

Neo: Germline

Age: Up-Down-Up

Region-enriched R5: 1.406/0.00276

 PSMC3IP

Mlig455_002175 {REF} {Length: 1599} {TRANSSPLICED} {Pfam: TBPIP/Hop2 winged helix domain [PF07106.15, score=92.4]; Leucine zipper with capping helix domain [PF18517.3, score=39.8]} {Human: ENSG00000131470, PSMC3IP, PSMC3 interacting protein, [RH, Score=128, Expect=2e-36]} {Mouse: ENSMUSG00000019303, Psmc3ip, proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein, [RH, Score=147, Expect=7e-44]} {Smed: dd_Smed_v6_15163_0_1, dd_Smed_v6_15163_0_1, [RH, Score=134, Expect=4e-39]} {RNA1509_36312} {RNA1310_45817.2} {RNA815_29085.1}

Mlig455_002276 {REF} {Length: 1717} {TRANSSPLICED} {Pfam: TBPIP/Hop2 winged helix domain [PF07106.15, score=92.3]; Leucine zipper with capping helix domain [PF18517.3, score=39.8]; Filament-like plant protein, long coiled-coil [PF05911.13, score=21.4]; Penicillinase repressor [PF03965.18, score=19.7]} {Human: ENSG00000131470, PSMC3IP, PSMC3 interacting protein, [RH, Score=130, Expect=3e-37]} {Mouse: ENSMUSG00000019303, Psmc3ip, proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein, [RH, Score=146, Expect=2e-43]} {Smed: dd_Smed_v6_15163_0_1, dd_Smed_v6_15163_0_1, [RH, Score=139, Expect=3e-41]} {RNA1509_18951} {RNA1310_38683} {RNA815_16821}

Cumulative graph for MligTC455_19107

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.836 3.813 0.49821 1.00000
RegionR2 -0.015 3.813 0.98090 1.00000
RegionR3 -1.122 3.813 0.02530 0.27188
RegionR4 0.871 3.813 0.07911 0.26290
RegionR5 1.406 3.813 0.00019 0.00276
RegionR6 -0.377 3.813 0.43130 0.99486
RegionR7 -0.07 3.813 0.90577 1.00000
RegionR8 0.143 3.813 0.83444 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.212 3.813 0.91268 1.00000
RegenerationR2 -0.353 3.813 0.49846 0.87092
RegenerationR3 0.685 3.813 0.24325 0.67762
RegenerationR4 -0.413 3.813 0.42504 0.82822
RegenerationR5 -0.469 3.813 0.31423 0.73913
RegenerationR6 -0.134 3.813 0.81893 0.98627
RegenerationBL -0.525 3.813 0.46825 0.83449
RegenerationTP -1.002 3.813 0.20262 0.64416


Genes with expression patterns similar to MligTC455_19107

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_19107 490 10.21 Mlig455_002175, Mlig455_002276

Neo: Germline

Age: Up-Down-Up

Region-enriched R5: 1.406/0.00276

 PSMC3IP 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_002175 {REF} {Length: 1599} {TRANSSPLICED} {Pfam: TBPIP/Hop2 winged helix domain [PF07106.15, score=92.4]; Leucine zipper with capping helix domain [PF18517.3, score=39.8]} {Human: ENSG00000131470, PSMC3IP, PSMC3 interacting protein, [RH, Score=128, Expect=2e-36]} {Mouse: ENSMUSG00000019303, Psmc3ip, proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein, [RH, Score=147, Expect=7e-44]} {Smed: dd_Smed_v6_15163_0_1, dd_Smed_v6_15163_0_1, [RH, Score=134, Expect=4e-39]} {RNA1509_36312} {RNA1310_45817.2} {RNA815_29085.1}

Mlig455_002276 {REF} {Length: 1717} {TRANSSPLICED} {Pfam: TBPIP/Hop2 winged helix domain [PF07106.15, score=92.3]; Leucine zipper with capping helix domain [PF18517.3, score=39.8]; Filament-like plant protein, long coiled-coil [PF05911.13, score=21.4]; Penicillinase repressor [PF03965.18, score=19.7]} {Human: ENSG00000131470, PSMC3IP, PSMC3 interacting protein, [RH, Score=130, Expect=3e-37]} {Mouse: ENSMUSG00000019303, Psmc3ip, proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein, [RH, Score=146, Expect=2e-43]} {Smed: dd_Smed_v6_15163_0_1, dd_Smed_v6_15163_0_1, [RH, Score=139, Expect=3e-41]} {RNA1509_18951} {RNA1310_38683} {RNA815_16821}
2. MligTC455_41170 965 20.1 Mlig455_009941, Mlig455_035110

Neo: Int S/G2/M

Age: -

Region-enriched R4: 2.081/0.00955

 RBBP8 2.634 0.825 - 0.858 - - 0.951

Mlig455_009941 {REF} {Length: 1805} {TRANSSPLICED} {Pfam: SlyX [PF04102.14, score=21.0]} {Human: ENSG00000101773, RBBP8, RB binding protein 8, endonuclease, [RH, Score=59.7, Expect=8e-09]} {Mouse: ENSMUSG00000041238, Rbbp8, retinoblastoma binding protein 8, endonuclease, [RH, Score=60.1, Expect=4e-09]} {RNA1509_16493, RNA1509_44203} {RNA1310_16256.1, RNA1509_44203} {RNA1509_44203, RNA815_6106.1}

Mlig455_035110 {REF} {Length: 1804} {TRANSSPLICED} {Pfam: SlyX [PF04102.14, score=21.0]} {Human: ENSG00000101773, RBBP8, RB binding protein 8, endonuclease, [RH, Score=59.7, Expect=7e-09]} {Mouse: ENSMUSG00000041238, Rbbp8, retinoblastoma binding protein 8, endonuclease, [RH, Score=60.1, Expect=4e-09]} {RNA1509_16493} {RNA1310_16256.1, RNA1509_16493} {RNA1509_16493, RNA815_6106.1}
3. MligTC455_41171 479 9.99 Mlig455_062420

Neo: -

Age: -

Region-enriched R4: 1.846/0.02223
Region-enriched R5: 1.199/0.04594

 RBBP8 2.632 0.827 - 0.852 - - 0.953 Mlig455_062420 {REF} {Length: 1025} {TRANSSPLICED} {Pfam: SlyX [PF04102.14, score=21.0]} {Human: ENSG00000101773, RBBP8, RB binding protein 8, endonuclease, [RH, Score=59.7, Expect=8e-09]} {Mouse: ENSMUSG00000041238, Rbbp8, retinoblastoma binding protein 8, endonuclease, [RH, Score=60.1, Expect=4e-09]} {RNA1509_44203} {RNA1310_16256.1} {RNA815_6106.1}
4. MligTC455_34605 442 9.21 Mlig455_038363

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.970/0.00699

 DDX4 2.586 0.749 - 0.885 - - 0.952 Mlig455_038363 {REF} {Length: 4049} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=154.6]; Helicase conserved C-terminal domain [PF00271.33, score=92.6]; Type III restriction enzyme, res subunit [PF04851.17, score=20.5]} {Human: ENSG00000152670, DDX4, DEAD-box helicase 4, [Score=384, Expect=2e-122]} {Mouse: ENSMUSG00000021758, Ddx4, DEAD (Asp-Glu-Ala-Asp) box polypeptide 4, [Score=378, Expect=2e-118]} {Dmel: FBgn0283442, vas, vasa, [Score=376, Expect=3e-118]} {Celegans: WBGene00006888, vbh-1, Vasa-and Belle-like Helicase, [Score=332, Expect=3e-102]} {Smed: dd_Smed_v6_1985_0_2, dd_Smed_v6_1985_0_2, [Score=393, Expect=1e-122]} {RNA1509_6594} {RNA1310_5999.1} {RNA815_5319.1}
5. MligTC455_41684 480 9.99 Mlig455_057340

Neo: Int S/G2/M

Age: -

Region-specific R5: 3.223

Region-enriched R5: 3.055/0.00000

 1.803 - - 0.842 - - 0.961 Mlig455_057340 {REF} {Length: 4416} {TRANSSPLICED} {Pfam: C2H2 type zinc-finger (2 copies) [PF12756.9, score=40.5]; C2H2-type zinc finger [PF13894.8, score=29.6]} {RNA1509_19783, RNA1509_34761} {RNA1310_8051.2, RNA1509_19783, RNA1509_34761} {RNA1509_19783, RNA1509_34761, RNA815_21819}
6. MligTC455_41610 149 3.1 Mlig455_005689

Neo: -

Age: Down-Down-Down

 1.798 0.847 - - - - 0.951 Mlig455_005689 {REF} {Length: 1271} {Smed: dd_Smed_v6_12396_0_1, dd_Smed_v6_12396_0_1, [Score=46.2, Expect=5e-06]} {RNA1509_26983, RNA1509_29260} {RNA1310_55944, RNA1509_26983} {RNA1509_26983, RNA815_3780.1}
7. MligTC455_53255 413 8.6 Mlig455_014908

Neo: Int S/G2/M

Age: Down-Up-Down

Region-enriched R5: 1.974/0.00170

 MAD2L1 1.78 0.817 - - - - 0.963 Mlig455_014908 {REF} {Length: 2989} {Pfam: Integrase zinc binding domain [PF17921.3, score=61.5]; HORMA domain [PF02301.20, score=49.3]; Integrase core domain [PF00665.28, score=38.6]; H2C2 zinc finger [PF09337.12, score=28.2]} {Human: ENSG00000164109, MAD2L1, mitotic arrest deficient 2 like 1, [Score=114, Expect=7e-29]} {Mouse: ENSMUSG00000029910, Mad2l1, MAD2 mitotic arrest deficient-like 1, [Score=112, Expect=2e-28]} {Dmel: FBgn0035640, mad2, [Score=90.9, Expect=1e-20]} {Celegans: WBGene00003161, mdf-2, MAD (Yeast Mitosis arrest DeFicient) related; MDF-2, [Score=101, Expect=2e-25]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=172, Expect=2e-48]} {RNA1509_14823} {RNA1310_12974.1} {RNA815_3365}
8. MligTC455_26003 311 6.48 Mlig455_015543

Neo: -

Age: -

Region-enriched R5: 1.299/0.02445

 RAB8B 1.732 - - 0.782 - - 0.950 Mlig455_015543 {REF} {Length: 2323} {Pfam: Ras family [PF00071.24, score=213.1]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=118.6]; ADP-ribosylation factor family [PF00025.23, score=63.1]; Elongation factor Tu GTP binding domain [PF00009.29, score=27.7]; Gtr1/RagA G protein conserved region [PF04670.14, score=27.7]; Signal recognition particle receptor beta subunit [PF09439.12, score=25.4]; 50S ribosome-binding GTPase [PF01926.25, score=20.5]; RsgA GTPase [PF03193.18, score=19.9]} {Human: ENSG00000166128, RAB8B, RAB8B, member RAS oncogene family, [RH, Score=290, Expect=2e-100]; ENSG00000167461, RAB8A, RAB8A, member RAS oncogene family, [RH, Score=286, Expect=7e-99]} {Mouse: ENSMUSG00000036943, Rab8b, RAB8B, member RAS oncogene family, [RH, Score=292, Expect=2e-101]; ENSMUSG00000003037, Rab8a, RAB8A, member RAS oncogene family, [RH, Score=289, Expect=5e-100]} {Dmel: FBgn0262518, Rab8, [RH, Score=273, Expect=8e-94]} {Celegans: WBGene00004272, rab-8, RAB family; Rab8, [RH, Score=278, Expect=8e-96]} {Smed: dd_Smed_v6_3485_0_1, dd_Smed_v6_3485_0_1, [RH, Score=272, Expect=8e-94]} {RNA1509_12702} {RNA1310_26159.1, RNA1509_12702} {RNA1509_12702, RNA815_11534.1}
9. MligTC455_22545 1507 31.39 Mlig455_014080, Mlig455_014110

Neo: -

Age: Down-Up-Down

Region-enriched R5: 1.770/0.00925

 1.702 0.745 - - - - 0.957

Mlig455_014080 {REF} {Length: 1230} {TRANSSPLICED} {Dmel: FBgn0259238, CG42336, [RH, Score=40.4, Expect=6e-06]} {Smed: dd_Smed_v6_1540_0_1, dd_Smed_v6_1540_0_1, [RH, Score=72.8, Expect=2e-18]} {RNA1509_9758} {RNA1310_27606} {RNA815_12165}

Mlig455_014110 {REF} {Length: 1232} {TRANSSPLICED} {Dmel: FBgn0259238, CG42336, [RH, Score=40.4, Expect=6e-06]} {Smed: dd_Smed_v6_1540_0_1, dd_Smed_v6_1540_0_1, [RH, Score=72.8, Expect=2e-18]} {RNA1509_23771, RNA1509_7872, RNA1509_9758} {RNA1310_27606, RNA1509_23771, RNA1509_7872, RNA1509_9758} {RNA1509_23771, RNA1509_7872, RNA1509_9758, RNA815_12165}
10. MligTC455_51562 331 6.9 Mlig455_031005

Neo: Irradiation

Age: -

 RMI1 1.696 0.738 - - - - 0.958 Mlig455_031005 {REF} {Length: 2426} {TRANSSPLICED} {Pfam: RecQ mediated genome instability protein [PF08585.14, score=132.5]; Recq-mediated genome instability protein 1, C-terminal OB-fold [PF16099.7, score=41.0]} {Human: ENSG00000178966, RMI1, RecQ mediated genome instability 1, [RH, Score=120, Expect=1e-28]} {Mouse: ENSMUSG00000035367, Rmi1, RecQ mediated genome instability 1, [RH, Score=115, Expect=4e-26]} {Celegans: WBGene00011576, rmh-2, RMi1 (RMI1) Homolog, [Score=67.0, Expect=3e-11]} {Smed: dd_Smed_v6_15427_0_1, dd_Smed_v6_15427_0_1, [RH, Score=97.1, Expect=7e-21]} {RNA1509_19306} {RNA1310_8212.2} {RNA815_20681}
11. MligTC455_53865 194 4.05 Mlig455_063530

Neo: -

Age: -

 1.679 - 0.716 - - - 0.963 Mlig455_063530 {REF} {Length: 8537} {TRANSSPLICED} {Pfam: OST-HTH/LOTUS domain [PF12872.9, score=24.6]} {Mouse: ENSMUSG00000035517, Tdrd7, tudor domain containing 7, [RH, Score=67.0, Expect=5e-11]} {RNA1509_17754, RNA1509_29299} {RNA1310_1487, RNA1509_17754} {RNA1509_17754, RNA815_6982}
12. MligTC455_44893 215 4.47 Mlig455_020672

Neo: Irradiation

Age: -

 SMARCC2 1.673 0.722 - - - - 0.951 Mlig455_020672 {REF} {Length: 2246} {TRANSSPLICED} {Pfam: SWIRM domain [PF04433.19, score=107.7]; SWIRM-associated region 1 [PF16495.7, score=79.7]; SWIRM-associated domain at the C-terminal [PF16498.7, score=49.2]; Myb-like DNA-binding domain [PF00249.33, score=42.7]; Myb-like DNA-binding domain [PF13921.8, score=28.7]} {Human: ENSG00000139613, SMARCC2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, [RH, Score=450, Expect=3e-144]} {Mouse: ENSMUSG00000025369, Smarcc2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2, [RH, Score=451, Expect=8e-146]} {Dmel: FBgn0002783, mor, moira, [RH, Score=339, Expect=3e-103]} {Celegans: WBGene00004203, swsn-1, SWI/SNF nucleosome remodeling complex component; SWI3-like protein, [RH, Score=331, Expect=1e-103]} {Smed: dd_Smed_v6_1804_0_1, dd_Smed_v6_1804_0_1, [RH, Score=405, Expect=2e-127]} {RNA1509_39768, RNA1509_54926} {RNA1310_5494.1, RNA1509_39768, RNA1509_54926} {RNA1509_39768, RNA1509_54926, RNA815_8217}
13. MligTC455_42888 324 6.74 Mlig455_023771

Neo: Irradiation

Age: -

Region-enriched R5: 1.824/0.00004

 PTPMT1 0.98 - - - - - 0.980 Mlig455_023771 {REF} {Length: 883} {TRANSSPLICED} {Pfam: Dual specificity phosphatase, catalytic domain [PF00782.22, score=55.4]; Protein-tyrosine phosphatase [PF00102.29, score=21.0]} {Human: ENSG00000110536, PTPMT1, protein tyrosine phosphatase, mitochondrial 1, [RH, Score=101, Expect=1e-26]; ENSG00000285206, PTPMT1, protein tyrosine phosphatase, mitochondrial 1, [RH, Score=101, Expect=1e-26]} {Mouse: ENSMUSG00000110860, Ptpmt1, protein tyrosine phosphatase, mitochondrial 1, [RH, Score=95.9, Expect=5e-24]} {Dmel: FBgn0039111, PTPMT1, Protein tyrosine phosphatase, mitochondrial 1, [RH, Score=114, Expect=5e-32]} {Celegans: WBGene00009207, F28C6.8, [RH, Score=103, Expect=8e-28]} {Smed: dd_Smed_v6_6276_0_2, dd_Smed_v6_6276_0_2, [RH, Score=99.4, Expect=2e-26]} {RNA1509_35905, RNA1509_45090} {RNA1310_38858, RNA1509_35905, RNA1509_45090} {RNA1509_35905, RNA1509_45090, RNA815_25279}
14. MligTC455_52386 364 7.59 Mlig455_023406

Neo: -

Age: -

 0.974 - - - - - 0.974 Mlig455_023406 {REF} {Length: 701} {TRANSSPLICED} {Pfam: Tim10/DDP family zinc finger [PF02953.17, score=44.4]} {Dmel: FBgn0027358, Tim9b, Translocase of inner membrane 9b, [Score=40.8, Expect=1e-05]} {Celegans: WBGene00006572, tin-9.1, Mitochondrial import inner membrane translocase subunit Tim9, [Score=50.8, Expect=8e-10]} {RNA1509_22097} {RNA1310_16763} {RNA815_6211.1}
15. MligTC455_28513 331 6.9 Mlig455_008347

Neo: Irradiation

Age: -

 ZNRD1 0.97 - - - - - 0.970 Mlig455_008347 {REF} {Length: 1609} {Pfam: Transcription factor S-II (TFIIS) [PF01096.20, score=46.5]} {Human: ENSG00000233795, ZNRD1, zinc ribbon domain containing 1, [RH, Score=51.6, Expect=5e-08]; ENSG00000236949, ZNRD1, zinc ribbon domain containing 1, [RH, Score=51.6, Expect=5e-08]; ENSG00000236808, ZNRD1, zinc ribbon domain containing 1, [RH, Score=51.6, Expect=5e-08]; ENSG00000066379, ZNRD1, zinc ribbon domain containing 1, [RH, Score=51.6, Expect=5e-08]; ENSG00000235443, ZNRD1, zinc ribbon domain containing 1, [RH, Score=51.6, Expect=5e-08]; ENSG00000206502, ZNRD1, zinc ribbon domain containing 1, [RH, Score=51.6, Expect=5e-08]; ENSG00000224859, ZNRD1, zinc ribbon domain containing 1, [RH, Score=51.6, Expect=5e-08]; ENSG00000235176, ZNRD1, zinc ribbon domain containing 1, [RH, Score=51.6, Expect=5e-08]} {Mouse: ENSMUSG00000036315, Znrd1, zinc ribbon domain containing, 1, [RH, Score=50.4, Expect=1e-07]} {Dmel: FBgn0038903, RpI12, [RH, Score=53.5, Expect=5e-09]} {Celegans: WBGene00007616, rpoa-12, DNA-directed RNA polymerase subunit, [RH, Score=54.3, Expect=2e-09]} {RNA1509_45987} {RNA1310_66016.1} {RNA815_19788.1}
16. MligTC455_49405 339 7.06 Mlig455_026717, Mlig455_051706

Neo: Irradiation

Age: -

 0.967 - - - - - 0.967

Mlig455_026717 {REF} {Length: 3047} {TRANSSPLICED} {RNA1509_30631} {RNA1310_7306} {RNA815_19830}

Mlig455_051706 {REF} {Length: 3001} {TRANSSPLICED} {RNA1509_30631} {RNA1310_7306, RNA1509_30631} {RNA1509_30631, RNA815_19830}
17. MligTC455_41782 372 7.76 Mlig455_039685, Mlig455_039741

Neo: -

Age: Down-Up-Up

 ANKRD29 0.966 - - - - - 0.966

Mlig455_039685 {REF} {Length: 1909} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=100.5]; Ankyrin repeat [PF00023.32, score=84.2]; Ankyrin repeats (many copies) [PF13857.8, score=82.1]; Ankyrin repeat [PF13606.8, score=67.7]; Ankyrin repeats (many copies) [PF13637.8, score=66.2]} {Human: ENSG00000154065, ANKRD29, ankyrin repeat domain 29, [Score=112, Expect=2e-28]} {Mouse: ENSMUSG00000057766, Ankrd29, ankyrin repeat domain 29, [Score=107, Expect=7e-27]} {Dmel: FBgn0031473, CG3104, [Score=127, Expect=4e-34]} {Celegans: WBGene00011240, R11A8.7, Ankyrin repeat and KH domain-containing protein R11A8.7, [Score=96.7, Expect=8e-22]} {Smed: dd_Smed_v6_6779_0_1, dd_Smed_v6_6779_0_1, [Score=103, Expect=4e-24]} {RNA1509_42977} {RNA1310_20834} {RNA815_40833}

Mlig455_039741 {REF} {Length: 2069} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=130.1]; Ankyrin repeats (many copies) [PF13857.8, score=97.5]; Ankyrin repeats (many copies) [PF13637.8, score=92.2]; Ankyrin repeat [PF00023.32, score=90.3]; Ankyrin repeat [PF13606.8, score=83.1]} {Human: ENSG00000154065, ANKRD29, ankyrin repeat domain 29, [Score=134, Expect=6e-36]} {Mouse: ENSMUSG00000057766, Ankrd29, ankyrin repeat domain 29, [Score=130, Expect=1e-34]} {Dmel: FBgn0031473, CG3104, [Score=146, Expect=8e-41]} {Celegans: WBGene00011240, R11A8.7, Ankyrin repeat and KH domain-containing protein R11A8.7, [Score=107, Expect=2e-25]} {Smed: dd_Smed_v6_9936_0_1, dd_Smed_v6_9936_0_1, [Score=131, Expect=5e-34]} {RNA1509_42977} {RNA1310_21408, RNA1509_42977} {RNA1509_42977, RNA815_40833}
18. MligTC455_36231 160 3.33 Mlig455_050387

Neo: -

Age: logFC(26M/2M)=0.471

Region-enriched R5: 1.411/0.01973

 BCAP31 0.965 - - - - - 0.965 Mlig455_050387 {REF} {Length: 2271} {TRANSSPLICED} {Pfam: Bap31/Bap29 transmembrane region [PF05529.14, score=86.2]} {Human: ENSG00000185825, BCAP31, B cell receptor associated protein 31, [Score=72.4, Expect=4e-15]; ENSG00000075790, BCAP29, B cell receptor associated protein 29, [Score=71.6, Expect=2e-15]; ENSG00000283852, BCAP29, B cell receptor associated protein 29, [Score=71.6, Expect=2e-15]} {Mouse: ENSMUSG00000020650, Bcap29, B cell receptor associated protein 29, [Score=69.7, Expect=2e-14]} {Dmel: FBgn0035165, CG13887, [Score=73.2, Expect=7e-16]} {Celegans: WBGene00021883, Y54G2A.18, 4D656, [Score=73.2, Expect=4e-16]} {RNA1509_26392, RNA1509_44522, RNA1509_57332} {RNA1310_24734.1, RNA1509_26392, RNA1509_44522} {RNA1509_26392, RNA1509_44522, RNA815_20971.1}
19. MligTC455_08810 173 3.6 Mlig455_054289

Neo: -

Age: Up-Down-Up

 LIMK1 0.962 - - 0.962 - - - Mlig455_054289 {REF} {Length: 2786} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=138.3]; Protein kinase domain [PF00069.27, score=130.6]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=19.1]} {Human: ENSG00000106683, LIMK1, LIM domain kinase 1, [Score=175, Expect=9e-49]} {Mouse: ENSMUSG00000029674, Limk1, LIM-domain containing, protein kinase, [Score=172, Expect=4e-48]} {Dmel: FBgn0283712, LIMK1, LIM domain kinase 1, [Score=163, Expect=3e-44]} {Celegans: WBGene00003030, lin-45, Raf homolog serine/threonine-protein kinase, [Score=105, Expect=1e-24]} {Smed: dd_Smed_v6_4373_0_1, dd_Smed_v6_4373_0_1, [Score=117, Expect=2e-29]} {RNA1509_32349} {RNA1310_20379.1, RNA1509_32349} {RNA1509_32349, RNA815_32665}
20. MligTC455_08811 162 3.38 Mlig455_054365

Neo: -

Age: Down-Down-Down

 0.962 - - 0.962 - - - Mlig455_054365 {REF} {Length: 881} {RNA1509_52541} {RNA1310_78287} {RNA815_41027}
21. MligTC455_52811 39 0.81 Mlig455_031331

Neo: Int S/G2/M

Age: -

Region-enriched R5: 3.422/0.02134

 0.962 - - - - - 0.962 Mlig455_031331 {REF} {Length: 492} {NoTransDecoderORF} {RNA1509_47533} {RNA1310_79837.2} {RNA815_48370}
22. MligTC455_39949 78 1.63 Mlig455_062594

Neo: -

Age: Down-Up-Down

 0.961 - - 0.961 - - - Mlig455_062594 {REF} {Length: 1930} {NoTransDecoderORF} {RNA1310_17694.1} {RNA815_30420}
23. MligTC455_48137 440 9.16 Mlig455_030458

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.612

 NTPCR 0.96 - - - - - 0.960 Mlig455_030458 {REF} {Length: 782} {TRANSSPLICED} {Pfam: NTPase [PF03266.17, score=131.8]; AAA domain [PF13401.8, score=29.3]; AAA domain [PF13604.8, score=28.4]; AAA ATPase domain [PF13191.8, score=25.7]; AAA domain [PF13238.8, score=23.8]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=21.1]; AAA domain [PF13521.8, score=21.1]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=20.7]; NACHT domain [PF05729.14, score=18.9]} {Human: ENSG00000135778, NTPCR, nucleoside-triphosphatase, cancer-related, [RH, Score=119, Expect=3e-33]} {Mouse: ENSMUSG00000031851, Ntpcr, nucleoside-triphosphatase, cancer-related, [RH, Score=108, Expect=3e-29]} {Dmel: FBgn0037046, CG10581, [RH, Score=94.0, Expect=1e-23]} {RNA1509_29841} {RNA1310_37079.2} {RNA815_20458.1}
24. MligTC455_49263 512 10.68 Mlig455_025933

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.311

Region-enriched R5: 1.439/0.00123

 0.96 - - - - - 0.960 Mlig455_025933 {REF} {Length: 2336} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=21.8]} {RNA1509_14753, RNA1509_37242, RNA1509_59972} {RNA1310_7813, RNA1509_14753, RNA1509_37242, RNA1509_59972} {RNA1509_14753, RNA1509_37242, RNA1509_59972, RNA815_11829.1}
25. MligTC455_08391 328 6.84 Mlig455_022884

Neo: Irradiation

Age: -

Region-enriched R5: 2.720/0.00000

 METTL5 0.959 - - - - - 0.959 Mlig455_022884 {REF} {Length: 1211} {TRANSSPLICED} {Pfam: Methyltransferase domain [PF13649.8, score=39.1]; Methyltransferase small domain [PF05175.16, score=30.5]; Methyltransferase domain [PF13847.8, score=29.9]; Ribosomal protein L11 methyltransferase (PrmA) [PF06325.15, score=29.0]; Methyltransferase domain [PF08241.14, score=24.9]; N-6 DNA Methylase [PF02384.18, score=22.8]; Conserved hypothetical protein 95 [PF03602.17, score=20.0]; Putative RNA methylase family UPF0020 [PF01170.20, score=19.4]} {Human: ENSG00000138382, METTL5, methyltransferase like 5, [RH, Score=118, Expect=5e-32]} {Mouse: ENSMUSG00000051730, Mettl5, methyltransferase like 5, [RH, Score=119, Expect=1e-32]} {Dmel: FBgn0036856, CG9666, [RH, Score=111, Expect=1e-29]} {Celegans: WBGene00008008, C38D4.9, [RH, Score=89.0, Expect=4e-21]} {Smed: dd_Smed_v6_10068_0_1, dd_Smed_v6_10068_0_1, [RH, Score=146, Expect=3e-43]} {RNA1509_19099, RNA1509_32340} {RNA1310_26048, RNA1509_19099, RNA1509_32340} {RNA1509_19099, RNA1509_32340, RNA815_13141}
26. MligTC455_21505 219 4.57 Mlig455_004243, Mlig455_063139

Neo: Int S/G2/M

Age: -

Region-enriched R5: 2.566/0.02847

 0.958 - - - - - 0.958

Mlig455_004243 {REF} {Length: 3420} {Pfam: Replication protein A OB domain [PF16900.7, score=34.4]; OB-fold nucleic acid binding domain [PF01336.27, score=20.7]} {RNA1509_42291} {RNA1310_16322} {RNA815_63367}

Mlig455_063139 {REF} {Length: 2398} {TRANSSPLICED} {Pfam: Replication protein A OB domain [PF16900.7, score=26.7]} {RNA1509_42291} {RNA1310_16322, RNA1509_42291} {RNA1509_42291, RNA815_63367}
27. MligTC455_24413 231 4.8 Mlig455_033028

Neo: Int S/G2/M

Age: -

 0.957 - - - - - 0.957 Mlig455_033028 {REF} {Length: 1921} {TRANSSPLICED} {RNA1310_27703} {RNA815_11443}
28. MligTC455_44538 162 3.37 Mlig455_042460

Neo: -

Age: Down-Up-Down

Region-enriched R5: 2.820/0.00714

 PRDM10 0.957 - - - - - 0.957 Mlig455_042460 {REF} {Length: 3805} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=53.8]; C2H2-type zinc finger [PF13894.8, score=53.2]; C2H2 type zinc-finger (2 copies) [PF12756.9, score=24.5]; Zinc-finger of C2H2 type [PF12874.9, score=21.5]} {Human: ENSG00000170325, PRDM10, PR/SET domain 10, [RH, Score=151, Expect=8e-37]} {Mouse: ENSMUSG00000042496, Prdm10, PR domain containing 10, [RH, Score=150, Expect=2e-36]} {Dmel: FBgn0030314, CG11696, [Score=55.8, Expect=2e-07]} {RNA1509_23473} {RNA1310_4659} {RNA815_26860}
29. MligTC455_44729 137 2.84 Mlig455_036479

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.298

Region-enriched R5: 1.952/0.00788

 CABIN1 0.957 - - - - - 0.957 Mlig455_036479 {REF} {Length: 6283} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF14559.8, score=19.2]} {Human: ENSG00000099991, CABIN1, calcineurin binding protein 1, [RH, Score=181, Expect=8e-46]} {Mouse: ENSMUSG00000020196, Cabin1, calcineurin binding protein 1, [RH, Score=180, Expect=1e-45]} {Smed: dd_Smed_v6_8249_0_1, dd_Smed_v6_8249_0_1, [Score=213, Expect=9e-57]} {RNA1509_12600} {RNA1310_3875} {RNA815_16101}
30. MligTC455_41753 224 4.67 Mlig455_062497

Neo: -

Age: -

 CCZ1 0.955 - - - - - 0.955 Mlig455_062497 {REF} {Length: 2115} {Pfam: First Longin domain of INTU, CCZ1 and HPS4 [PF19031.2, score=89.7]; Intu longin-like domain 2 [PF19032.2, score=77.1]; Intu longin-like domain 3 [PF19033.2, score=38.3]} {Human: ENSG00000122674, CCZ1, CCZ1 homolog, vacuolar protein trafficking and biogenesis associated, [RH, Score=313, Expect=4e-101]; ENSG00000146574, CCZ1B, CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated, [RH, Score=313, Expect=4e-101]} {Mouse: ENSMUSG00000029617, Ccz1, CCZ1 vacuolar protein trafficking and biogenesis associated, [RH, Score=320, Expect=5e-104]} {Dmel: FBgn0035470, Ccz1, Caffeine, calcium, zinc sensitivity 1, [RH, Score=151, Expect=3e-40]} {Celegans: WBGene00010283, ccz-1, [RH, Score=112, Expect=3e-26]} {Smed: dd_Smed_v6_9997_0_1, dd_Smed_v6_9997_0_1, [RH, Score=139, Expect=8e-36]} {RNA1509_13134} {RNA1310_14840} {RNA815_5189.1}
31. MligTC455_13228 168 3.5 Mlig455_018476

Neo: -

Age: logFC(26M/2M)=0.882

Region-enriched R3: 2.619/0.02717
Region-enriched R5: 2.567/0.00530

 0.953 - - 0.953 - - - Mlig455_018476 {REF} {Length: 1977} {RNA1509_42284, RNA1509_43857} {RNA1310_32873, RNA1509_43857} {RNA1509_43857, RNA815_10899.1}
32. MligTC455_40077 179 3.73 Mlig455_014990

Neo: -

Age: -

Region-enriched R5: 1.964/0.04664

 0.953 - - - - - 0.953 Mlig455_014990 {REF} {Length: 3906} {TRANSSPLICED} {RNA1509_41002, RNA1509_58907} {RNA1310_13341, RNA1509_41002, RNA1509_58907} {RNA1509_41002, RNA1509_58907, RNA815_774.1}
33. MligTC455_52496 28 0.57 Mlig455_013244

Neo: -

Age: -

 CACFD1 0.953 - - - - - 0.953 Mlig455_013244 {REF} {Length: 5690} {Pfam: Uncharacterized conserved protein CG6151-P [PF10233.11, score=67.5]} {Human: ENSG00000160325, CACFD1, calcium channel flower domain containing 1, [Score=57.0, Expect=9e-10]; ENSG00000280479, CACFD1, calcium channel flower domain containing 1, [Score=57.0, Expect=9e-10]} {Mouse: ENSMUSG00000015488, Cacfd1, calcium channel flower domain containing 1, [Score=55.8, Expect=6e-10]} {RNA1509_42052} {RNA1310_29216} {RNA815_11121.1}
34. MligTC455_51579 550 11.47 Mlig455_042559

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.292

 DIS3L 0.952 - - - - - 0.952 Mlig455_042559 {REF} {Length: 3524} {TRANSSPLICED} {Pfam: RNB domain [PF00773.21, score=268.4]; Dis3-like cold-shock domain 2 (CSD2) [PF17849.3, score=74.6]; Rrp44-like cold shock domain [PF17216.5, score=28.1]; Cold shock domain [PF17876.3, score=23.3]; S1 domain [PF17215.5, score=19.3]} {Human: ENSG00000166938, DIS3L, DIS3 like exosome 3'-5' exoribonuclease, [RH, Score=869, Expect=0.0]} {Mouse: ENSMUSG00000032396, Dis3l, DIS3 like exosome 3'-5' exoribonuclease, [RH, Score=872, Expect=0.0]} {Dmel: FBgn0039183, Dis3, [RH, Score=509, Expect=2e-163]} {Celegans: WBGene00001001, dis-3, Probable exosome complex exonuclease RRP44, [RH, Score=451, Expect=8e-142]} {Smed: dd_Smed_v6_6527_0_1, dd_Smed_v6_6527_0_1, [RH, Score=914, Expect=0.0]} {RNA1509_5285} {RNA1310_3365, RNA1509_5285} {RNA1509_5285, RNA815_3022}
35. MligTC455_46292 444 9.24 Mlig455_024938

Neo: -

Age: -

Region-enriched R5: 2.279/0.00036

 SLC17A9 0.951 - - - - - 0.951 Mlig455_024938 {REF} {Length: 2751} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=154.2]} {Human: ENSG00000101194, SLC17A9, solute carrier family 17 member 9, [RH, Score=314, Expect=2e-102]} {Mouse: ENSMUSG00000023393, Slc17a9, solute carrier family 17, member 9, [RH, Score=308, Expect=7e-100]} {Dmel: FBgn0025684, MFS18, Major Facilitator Superfamily Transporter 18, [RH, Score=333, Expect=4e-110]} {Celegans: WBGene00010758, vnut-1, Vesicular NUcleotide Transporte, [RH, Score=310, Expect=8e-101]} {Smed: dd_Smed_v6_1326_0_1, dd_Smed_v6_1326_0_1, [RH, Score=414, Expect=1e-141]} {RNA1509_48544, RNA1509_7549} {RNA1310_6054.1, RNA1509_48544, RNA1509_7549} {RNA1509_48544, RNA1509_7549, RNA815_2086.1}
36. MligTC455_43364 95 1.98 Mlig455_002247

Neo: -

Age: -

 0.95 - - - - - 0.950 Mlig455_002247 {REF} {Length: 6158} {TRANSSPLICED} {Pfam: Putative zinc-finger domain [PF10650.11, score=22.5]} {Smed: dd_Smed_v6_9636_0_1, dd_Smed_v6_9636_0_1, [RH, Score=126, Expect=2e-29]} {RNA1509_29369} {RNA1310_1698} {RNA815_876.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA