Data search
Results for MligTC455_19161
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_19161 | 783 | 16.32 | Mlig455_008517 | Neo: - Age: Down-Down-Up Region-enriched R5: 1.247/0.00353 |
Mlig455_008517 {REF} {Length: 1080} {TRANSSPLICED} {Dmel: FBgn0030786, mRpL22, mitochondrial ribosomal protein L22, [RH, Score=59.3, Expect=4e-10]} {Smed: dd_Smed_v6_2175_0_1, dd_Smed_v6_2175_0_1, [RH, Score=78.2, Expect=5e-17]} {RNA1509_27643} {RNA1310_27864.1} {RNA815_12212.1} |
Cumulative graph for MligTC455_19161
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.541 | 4.334 | 0.23234 | 0.87519 | |
| RegionR2 | -0.424 | 4.334 | 0.39411 | 0.78852 | |
| RegionR3 | 0.264 | 4.334 | 0.50303 | 0.99540 | |
| RegionR4 | 1.05 | 4.334 | 0.01717 | 0.09140 | |
| RegionR5 | 1.247 | 4.334 | 0.00026 | 0.00353 | |
| RegionR6 | 0.319 | 4.334 | 0.42855 | 0.99291 | |
| RegionR7 | -0.412 | 4.334 | 0.47308 | 1.00000 | |
| RegionR8 | -0.503 | 4.334 | 0.51014 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.975 | 4.334 | 0.16175 | 0.90401 | |
| RegenerationR2 | -0.518 | 4.334 | 0.18252 | 0.62564 | |
| RegenerationR3 | -0.507 | 4.334 | 0.21002 | 0.64628 | |
| RegenerationR4 | -0.237 | 4.334 | 0.55384 | 0.89380 | |
| RegenerationR5 | -0.362 | 4.334 | 0.30988 | 0.73613 | |
| RegenerationR6 | -0.019 | 4.334 | 0.96238 | 1.00000 | |
| RegenerationBL | -0.435 | 4.334 | 0.42788 | 0.79617 | |
| RegenerationTP | -0.016 | 4.334 | 0.98265 | 1.00000 |
Genes with expression patterns similar to MligTC455_19161
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_19161 | 783 | 16.32 | Mlig455_008517 | Neo: - Age: Down-Down-Up Region-enriched R5: 1.247/0.00353 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_008517 {REF} {Length: 1080} {TRANSSPLICED} {Dmel: FBgn0030786, mRpL22, mitochondrial ribosomal protein L22, [RH, Score=59.3, Expect=4e-10]} {Smed: dd_Smed_v6_2175_0_1, dd_Smed_v6_2175_0_1, [RH, Score=78.2, Expect=5e-17]} {RNA1509_27643} {RNA1310_27864.1} {RNA815_12212.1} | |
| 2. | MligTC455_48211 | 976 | 20.33 | Mlig455_013971, Mlig455_035001 | Neo: - Age: logFC(26M/2M)=0.541 |
1.796 | - | - | - | 0.840 | - | 0.956 | Mlig455_013971 {REF} {Length: 687} {TRANSSPLICED} {Pfam: rRNA biogenesis protein RRP36 [PF06102.14, score=64.0]} {RNA1509_21344} {RNA1310_49166} {RNA815_27804} Mlig455_035001 {REF} {Length: 688} {TRANSSPLICED} {Pfam: rRNA biogenesis protein RRP36 [PF06102.14, score=64.0]} {RNA1509_21344} {RNA1310_49166, RNA1509_21344} {RNA1509_21344, RNA815_27804} |
|
| 3. | MligTC455_37015 | 1773 | 36.94 | Mlig455_010987 | Neo: - Age: - |
DPP7 | 1.765 | - | - | - | 0.813 | 0.952 | - | Mlig455_010987 {REF} {Length: 3126} {TRANSSPLICED} {Pfam: Serine carboxypeptidase S28 [PF05577.14, score=280.3]; Serine aminopeptidase, S33 [PF12146.10, score=22.8]} {Human: ENSG00000176978, DPP7, dipeptidyl peptidase 7, [RH, Score=432, Expect=3e-147]} {Mouse: ENSMUSG00000026958, Dpp7, dipeptidylpeptidase 7, [RH, Score=415, Expect=2e-140]} {Dmel: FBgn0032864, CG2493, [Score=308, Expect=2e-99]} {Celegans: WBGene00022801, pcp-5, Prolyl carboxy peptidase like protein 5, [Score=263, Expect=2e-81]} {Smed: dd_Smed_v6_1123_0_1, dd_Smed_v6_1123_0_1, [RH, Score=424, Expect=1e-144]} {RNA1509_1588, RNA1509_20468} {RNA1310_12981, RNA1509_20468} {RNA1509_20468, RNA815_4278} |
| 4. | MligTC455_48567 | 358 | 7.45 | Mlig455_043150 | Neo: - Age: - Region-enriched R5: 1.668/0.02982 |
1.736 | - | - | - | - | 0.765 | 0.971 | Mlig455_043150 {REF} {Length: 3448} {TRANSSPLICED} {RNA1509_54015} {RNA1310_37014, RNA1509_54015} {RNA1509_54015, RNA815_7246.1} | |
| 5. | MligTC455_36496 | 283 | 5.89 | Mlig455_018138 | Neo: - Age: Down-Up-Up |
TAF5 | 1.704 | - | - | - | 0.748 | - | 0.956 | Mlig455_018138 {REF} {Length: 2151} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=126.9]; WD40 associated region in TFIID subunit, NTD2 domain [PF04494.17, score=93.6]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=44.8]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=18.3]} {Human: ENSG00000148835, TAF5, TATA-box binding protein associated factor 5, [RH, Score=424, Expect=8e-138]} {Mouse: ENSMUSG00000025049, Taf5, TATA-box binding protein associated factor 5, [RH, Score=423, Expect=1e-137]} {Dmel: FBgn0010356, Taf5, TBP-associated factor 5, [RH, Score=378, Expect=1e-121]} {Celegans: WBGene00006386, taf-5, TAF (TBP-associated transcription factor) family, [RH, Score=254, Expect=2e-75]} {Smed: dd_Smed_v6_7319_0_1, dd_Smed_v6_7319_0_1, [Score=310, Expect=8e-96]} {RNA1509_15120} {RNA1310_12001} {RNA815_9687} |
| 6. | MligTC455_41384 | 839 | 17.49 | Mlig455_025978 | Neo: - Age: - |
CPOX | 1.681 | - | - | - | - | 0.727 | 0.954 | Mlig455_025978 {REF} {Length: 2229} {TRANSSPLICED} {Pfam: Coproporphyrinogen III oxidase [PF01218.20, score=439.7]} {Human: ENSG00000080819, CPOX, coproporphyrinogen oxidase, [RH, Score=413, Expect=5e-142]} {Mouse: ENSMUSG00000022742, Cpox, coproporphyrinogen oxidase, [RH, Score=407, Expect=7e-140]} {Dmel: FBgn0021944, Coprox, Coproporphyrinogen oxidase, [RH, Score=412, Expect=5e-143]} {Smed: dd_Smed_v6_2002_0_1, dd_Smed_v6_2002_0_1, [RH, Score=407, Expect=5e-142]} {RNA1509_12544, RNA1509_36539} {RNA1310_13914, RNA1509_12544, RNA1509_36539} {RNA1509_12544, RNA1509_36539, RNA815_9874.1} |
| 7. | MligTC455_31367 | 473 | 9.85 | Mlig455_007351 | Neo: - Age: - |
VPS16 | 1.668 | - | - | - | 0.714 | - | 0.954 | Mlig455_007351 {REF} {Length: 4426} {Pfam: Vps16, C-terminal region [PF04840.14, score=197.0]; Vps16, N-terminal region [PF04841.15, score=127.4]} {Human: ENSG00000215305, VPS16, VPS16, CORVET/HOPS core subunit, [RH, Score=313, Expect=3e-93]} {Mouse: ENSMUSG00000027411, Vps16, VSP16 CORVET/HOPS core subunit, [RH, Score=317, Expect=8e-95]} {Dmel: FBgn0285911, Vps16A, Vacuolar protein sorting 16A, [RH, Score=275, Expect=2e-79]} {Celegans: WBGene00006516, vps-16, Vacuolar protein sorting-associated protein 16 homolog, [RH, Score=131, Expect=3e-31]} {Smed: dd_Smed_v6_4534_0_1, dd_Smed_v6_4534_0_1, [RH, Score=213, Expect=4e-58]} {RNA1509_15541} {RNA1310_5715, RNA1509_15541} {RNA1509_15541, RNA815_5826} |
| 8. | MligTC455_14648 | 394 | 8.21 | Mlig455_006859 | Neo: - Age: logFC(26M/2M)=0.300 |
CLPB | 0.966 | - | - | - | - | - | 0.966 | Mlig455_006859 {REF} {Length: 4077} {TRANSSPLICED} {Pfam: AAA domain (Cdc48 subfamily) [PF07724.16, score=137.2]; Ankyrin repeat [PF00023.32, score=52.4]; AAA domain (dynein-related subfamily) [PF07728.16, score=48.3]; Ankyrin repeats (3 copies) [PF12796.9, score=45.3]; Ankyrin repeat [PF13606.8, score=40.3]; Ankyrin repeats (many copies) [PF13637.8, score=35.3]; C-terminal, D2-small domain, of ClpB protein [PF10431.11, score=31.8]; Ankyrin repeats (many copies) [PF13857.8, score=30.3]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=29.8]; AAA domain [PF13401.8, score=26.5]; AAA ATPase domain [PF13191.8, score=23.4]; Sigma-54 interaction domain [PF00158.28, score=20.6]} {Human: ENSG00000162129, CLPB, ClpB homolog, mitochondrial AAA ATPase chaperonin, [RH, Score=522, Expect=1e-177]} {Mouse: ENSMUSG00000001829, Clpb, ClpB caseinolytic peptidase B, [RH, Score=525, Expect=4e-179]} {Dmel: FBgn0039075, CG4393, [Score=53.9, Expect=5e-07]} {Smed: dd_Smed_v6_7341_0_1, dd_Smed_v6_7341_0_1, [RH, Score=508, Expect=4e-174]} {RNA1509_24624, RNA1509_48777, RNA1509_49644, RNA1509_56365} {RNA1310_12205.1, RNA1509_24624, RNA1509_48777, RNA1509_49644, RNA1509_56365} {RNA1509_24624, RNA1509_48777, RNA1509_49644, RNA1509_56365, RNA815_4340} |
| 9. | MligTC455_19686 | 199 | 4.15 | Mlig455_037617 | Neo: Int S/G2/M Age: Down-Up-Down |
CCNQ | 0.966 | - | - | - | - | - | 0.966 | Mlig455_037617 {REF} {Length: 2073} {TRANSSPLICED} {Pfam: Cyclin, N-terminal domain [PF00134.25, score=29.6]} {Human: ENSG00000262919, CCNQ, cyclin Q, [RH, Score=126, Expect=1e-35]} {Mouse: ENSMUSG00000049489, Ccnq, cyclin Q, [RH, Score=126, Expect=2e-35]} {Dmel: FBgn0040394, CG16903, [Score=65.5, Expect=3e-12]} {Smed: dd_Smed_v6_9138_0_3, dd_Smed_v6_9138_0_3, [RH, Score=106, Expect=2e-28]} {RNA1509_34677} {RNA1310_40105.1} {RNA815_11835} |
| 10. | MligTC455_49838 | 682 | 14.21 | Mlig455_015054 | Neo: - Age: - |
PICALM | 0.964 | - | - | - | - | - | 0.964 | Mlig455_015054 {REF} {Length: 4607} {Pfam: ANTH domain [PF07651.18, score=214.9]; ENTH domain [PF01417.22, score=49.2]} {Human: ENSG00000073921, PICALM, phosphatidylinositol binding clathrin assembly protein, [RH, Score=409, Expect=4e-135]} {Mouse: ENSMUSG00000039361, Picalm, phosphatidylinositol binding clathrin assembly protein, [RH, Score=408, Expect=4e-135]} {Dmel: FBgn0086372, lap, like-AP180, [RH, Score=392, Expect=1e-127]} {Celegans: WBGene00006751, unc-11, Phosphatidylinositol-binding clathrin assembly protein unc-11, [RH, Score=364, Expect=5e-119]} {Smed: dd_Smed_v6_1463_0_1, dd_Smed_v6_1463_0_1, [RH, Score=412, Expect=2e-136]} {RNA1509_12591} {RNA1310_10051, RNA1509_12591} {RNA1509_12591, RNA815_3420.1} |
| 11. | MligTC455_50646 | 258 | 5.37 | Mlig455_069118 | Neo: - Age: - |
SCYL1 | 0.963 | - | - | - | - | - | 0.963 | Mlig455_069118 {REF} {Length: 3667} {TRANSSPLICED} {Pfam: HEAT repeat [PF02985.24, score=41.4]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=37.1]; HEAT repeats [PF13646.8, score=32.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=27.4]; Protein kinase domain [PF00069.27, score=25.0]} {Human: ENSG00000142186, SCYL1, SCY1 like pseudokinase 1, [RH, Score=446, Expect=1e-144]} {Mouse: ENSMUSG00000024941, Scyl1, SCY1-like 1 (S. cerevisiae), [RH, Score=445, Expect=3e-144]} {Dmel: FBgn0260990, yata, [RH, Score=518, Expect=6e-172]} {Celegans: WBGene00012337, W07G4.3, [RH, Score=409, Expect=9e-131]} {Smed: dd_Smed_v6_3470_0_1, dd_Smed_v6_3470_0_1, [RH, Score=461, Expect=2e-152]} {RNA1509_23084} {RNA1310_4140} {RNA815_4060} |
| 12. | MligTC455_39984 | 512 | 10.67 | Mlig455_039849 | Neo: - Age: - |
0.962 | - | - | - | - | - | 0.962 | Mlig455_039849 {REF} {Length: 887} {RNA1509_47643} {RNA1310_53943, RNA1509_47643} {RNA1509_47643, RNA815_31128} | |
| 13. | MligTC455_53236 | 261 | 5.44 | Mlig455_041819 | Neo: - Age: - |
0.959 | - | - | - | - | - | 0.959 | Mlig455_041819 {REF} {Length: 2489} {TRANSSPLICED} {Pfam: Cation efflux family [PF01545.23, score=89.0]; Dimerisation domain of Zinc Transporter [PF16916.7, score=40.6]} {Celegans: WBGene00019841, R02F11.3, [RH, Score=243, Expect=1e-74]} {Smed: dd_Smed_v6_12060_0_1, dd_Smed_v6_12060_0_1, [RH, Score=280, Expect=6e-90]} {RNA1509_14016, RNA1509_54106, RNA1509_55936} {RNA1310_8907, RNA1509_54106, RNA1509_55936} {RNA1509_54106, RNA1509_55936, RNA815_2986} | |
| 14. | MligTC455_43955 | 936 | 19.51 | Mlig455_004401 | Neo: Irradiation Age: Down-Up-Up, logFC(26M/2M)=0.301 Region-enriched R5: 1.996/0.00001 |
OXA1L | 0.954 | - | - | - | 0.954 | - | - | Mlig455_004401 {REF} {Length: 1411} {TRANSSPLICED} {Pfam: 60Kd inner membrane protein [PF02096.22, score=47.5]} {Human: ENSG00000155463, OXA1L, OXA1L, mitochondrial inner membrane protein, [RH, Score=140, Expect=9e-37]} {Mouse: ENSMUSG00000000959, Oxa1l, oxidase assembly 1-like, [RH, Score=146, Expect=2e-39]} {Dmel: FBgn0027615, CG6404, [RH, Score=140, Expect=2e-37]} {Celegans: WBGene00007215, oxa-1, OXA mitochondrial inner membrane insertase homolog, [RH, Score=100, Expect=3e-23]} {Smed: dd_Smed_v6_6233_1_2, dd_Smed_v6_6233_1_2, [RH, Score=101, Expect=8e-24]} {RNA1509_10268, RNA1509_34542} {RNA1310_18722.1, RNA1509_10268, RNA1509_34542} {RNA1509_10268, RNA1509_34542, RNA815_10959} |
| 15. | MligTC455_43053 | 588 | 12.24 | Mlig455_040895 | Neo: - Age: logFC(26M/2M)=-0.777 Region-enriched R4: 1.592/0.03527 |
PGP | 0.953 | - | - | - | - | - | 0.953 | Mlig455_040895 {REF} {Length: 1190} {TRANSSPLICED} {Pfam: Haloacid dehalogenase-like hydrolase [PF13344.8, score=96.1]; HAD-hyrolase-like [PF13242.8, score=65.6]; haloacid dehalogenase-like hydrolase [PF00702.28, score=25.9]; Haloacid dehalogenase-like hydrolase [PF13419.8, score=24.0]} {Human: ENSG00000184207, PGP, phosphoglycolate phosphatase, [RH, Score=146, Expect=5e-41]} {Mouse: ENSMUSG00000043445, Pgp, phosphoglycolate phosphatase, [RH, Score=150, Expect=1e-42]} {Dmel: FBgn0036760, CG5567, [RH, Score=130, Expect=3e-35]} {Celegans: WBGene00016892, C53A3.2, [RH, Score=164, Expect=8e-48]} {Smed: dd_Smed_v6_11063_0_1, dd_Smed_v6_11063_0_1, [RH, Score=179, Expect=2e-54]} {RNA1509_23273, RNA1509_46294} {RNA1310_29251, RNA1509_23273, RNA1509_46294} {RNA1509_23273, RNA1509_46294, RNA815_13107.1} |
| 16. | MligTC455_23720 | 791 | 16.48 | Mlig455_003566, Mlig455_015492 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.199 |
SF3A1 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_003566 {REF} {Length: 4010} {TRANSSPLICED} {Pfam: Surp module [PF01805.22, score=146.7]; Pre-mRNA splicing factor PRP21 like protein [PF12230.10, score=112.6]; Ubiquitin family [PF00240.25, score=35.3]} {Human: ENSG00000099995, SF3A1, splicing factor 3a subunit 1, [RH, Score=460, Expect=5e-150]} {Mouse: ENSMUSG00000002129, Sf3a1, splicing factor 3a, subunit 1, [RH, Score=461, Expect=1e-150]} {Dmel: FBgn0266917, Sf3a1, Splicing factor 3a subunit 1, [RH, Score=457, Expect=3e-149]} {Celegans: WBGene00004188, prp-21, Pre-RNA processing 21; Yeast PRP (Splicing factor) related, [RH, Score=381, Expect=1e-121]} {Smed: dd_Smed_v6_1001_0_1, dd_Smed_v6_1001_0_1, [RH, Score=426, Expect=9e-140]} {RNA1509_22180} {RNA1310_7991} {RNA815_785} Mlig455_015492 {REF} {Length: 3386} {TRANSSPLICED} {Pfam: Surp module [PF01805.22, score=146.7]; Pre-mRNA splicing factor PRP21 like protein [PF12230.10, score=111.7]; Ubiquitin family [PF00240.25, score=35.3]} {Human: ENSG00000099995, SF3A1, splicing factor 3a subunit 1, [RH, Score=459, Expect=1e-149]} {Mouse: ENSMUSG00000002129, Sf3a1, splicing factor 3a, subunit 1, [RH, Score=461, Expect=3e-150]} {Dmel: FBgn0266917, Sf3a1, Splicing factor 3a subunit 1, [RH, Score=455, Expect=3e-148]} {Celegans: WBGene00004188, prp-21, Pre-RNA processing 21; Yeast PRP (Splicing factor) related, [RH, Score=380, Expect=4e-121]} {Smed: dd_Smed_v6_1001_0_1, dd_Smed_v6_1001_0_1, [RH, Score=422, Expect=1e-138]} {RNA1509_16361, RNA1509_22180} {RNA1310_7991, RNA1509_16361, RNA1509_22180} {RNA1509_16361, RNA1509_22180, RNA815_785} |
| 17. | MligTC455_42332 | 831 | 17.32 | Mlig455_049097 | Neo: Int S/G2/M Age: - |
HARS | 0.951 | - | - | - | - | - | 0.951 | Mlig455_049097 {REF} {Length: 3093} {TRANSSPLICED} {Pfam: Histidyl-tRNA synthetase [PF13393.8, score=151.2]; Anticodon binding domain [PF03129.22, score=47.6]} {Human: ENSG00000170445, HARS, histidyl-tRNA synthetase, [RH, Score=530, Expect=0.0]} {Mouse: ENSMUSG00000001380, Hars, histidyl-tRNA synthetase, [RH, Score=534, Expect=0.0]} {Dmel: FBgn0027087, HisRS, Histidyl-tRNA synthetase, [RH, Score=492, Expect=2e-170]} {Celegans: WBGene00002001, hars-1, Histidine--tRNA ligase, [RH, Score=439, Expect=9e-150]} {Smed: dd_Smed_v6_1304_0_2, dd_Smed_v6_1304_0_2, [RH, Score=435, Expect=6e-144]} {RNA1509_26856, RNA1509_4721} {RNA1310_6281, RNA1509_26856, RNA1509_4721} {RNA1509_26856, RNA1509_4721, RNA815_6780} |
| 18. | MligTC455_42707 | 490 | 10.2 | Mlig455_062703 | Neo: - Age: Up-Up-Down |
0.951 | - | - | - | - | - | 0.951 | Mlig455_062703 {REF} {Length: 1072} {RNA1509_18300} {RNA1310_42056} {RNA815_25547} | |
| 19. | MligTC455_45283 | 303 | 6.32 | Mlig455_001036 | Neo: - Age: - |
0.951 | - | - | - | - | - | 0.951 | Mlig455_001036 {REF} {Length: 1698} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF13424.8, score=43.1]; Tetratricopeptide repeat [PF00515.30, score=26.8]; Tetratricopeptide repeat [PF13374.8, score=22.7]; Tetratricopeptide repeat [PF07719.19, score=21.2]} {RNA1509_50264, RNA1509_52648} {RNA1310_23457.1, RNA1509_50264, RNA1509_52648} {RNA1509_50264, RNA1509_52648, RNA815_20633} |
Berezikov Lab - 2020-2021 © ERIBA