M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_49002

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_49002 1240 25.84 Mlig455_023460

Neo: -

Age: -

 Mlig455_023460 {REF} {Length: 3425} {Pfam: Cupin-like domain [PF13621.8, score=42.3]} {Dmel: FBgn0038510, CG14331, [Score=164, Expect=4e-48]} {Celegans: WBGene00004205, psr-1, Bifunctional arginine demethylase and lysyl-hydroxylase psr-1, [Score=57.8, Expect=3e-09]} {Smed: dd_Smed_v6_8235_0_1, dd_Smed_v6_8235_0_1, [Score=163, Expect=2e-47]} {RNA1509_22854} {RNA1310_16345.2, RNA1509_22854} {RNA1509_22854, RNA815_11283}

Cumulative graph for MligTC455_49002

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.746 4.929 0.46729 1.00000
RegionR2 0.513 4.929 0.18788 0.54216
RegionR3 -0.044 4.929 0.89857 1.00000
RegionR4 0.525 4.929 0.17091 0.43473
RegionR5 -0.665 4.929 0.05272 0.19492
RegionR6 0.01 4.929 0.97683 1.00000
RegionR7 0.085 4.929 0.84357 1.00000
RegionR8 0.321 4.929 0.53088 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.332 4.929 0.44437 1.00000
RegenerationR2 0.335 4.929 0.30536 0.74562
RegenerationR3 0.444 4.929 0.23720 0.67147
RegenerationR4 0.114 4.929 0.76101 0.97312
RegenerationR5 0.399 4.929 0.28124 0.70982
RegenerationR6 0.356 4.929 0.34343 0.68880
RegenerationBL 0.974 4.929 0.00886 0.09339
RegenerationTP -0.068 4.929 0.88109 1.00000


Genes with expression patterns similar to MligTC455_49002

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_49002 1240 25.84 Mlig455_023460

Neo: -

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_023460 {REF} {Length: 3425} {Pfam: Cupin-like domain [PF13621.8, score=42.3]} {Dmel: FBgn0038510, CG14331, [Score=164, Expect=4e-48]} {Celegans: WBGene00004205, psr-1, Bifunctional arginine demethylase and lysyl-hydroxylase psr-1, [Score=57.8, Expect=3e-09]} {Smed: dd_Smed_v6_8235_0_1, dd_Smed_v6_8235_0_1, [Score=163, Expect=2e-47]} {RNA1509_22854} {RNA1310_16345.2, RNA1509_22854} {RNA1509_22854, RNA815_11283}
2. MligTC455_53778 951 19.82 Mlig455_007965, Mlig455_015595

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.392

Region-enriched R4: 2.645/0.00192

 PRXL2C 3.349 0.729 - 0.858 - 0.970 0.792

Mlig455_007965 {REF} {Length: 1357} {Pfam: AhpC/TSA antioxidant enzyme [PF13911.8, score=24.2]} {Smed: dd_Smed_v6_4424_0_1, dd_Smed_v6_4424_0_1, [Score=108, Expect=6e-30]} {RNA1509_57652} {RNA1310_27001.1} {RNA815_11622}

Mlig455_015595 {REF} {Length: 1838} {Pfam: AhpC/TSA antioxidant enzyme [PF13911.8, score=40.9]} {Human: ENSG00000158122, PRXL2C, peroxiredoxin like 2C, [RH, Score=135, Expect=5e-39]} {Mouse: ENSMUSG00000021482, Aaed1, AhpC/TSA antioxidant enzyme domain containing 1, [Score=125, Expect=3e-35]} {Smed: dd_Smed_v6_4424_0_1, dd_Smed_v6_4424_0_1, [RH, Score=149, Expect=3e-45]} {RNA1509_57652} {RNA1310_27001.2, RNA1509_57652} {RNA1509_57652, RNA815_11622}
3. MligTC455_30000 1520 31.66 Mlig455_006409

Neo: -

Age: Down-Down-Up

 NOTCH1 2.51 - - 0.759 - 0.950 0.801 Mlig455_006409 {REF} {Length: 2677} {TRANSSPLICED} {Pfam: EGF-like domain [PF00008.29, score=198.7]; Human growth factor-like EGF [PF12661.9, score=99.3]; EGF-like domain [PF07974.15, score=23.3]} {Human: ENSG00000148400, NOTCH1, notch 1, [Score=306, Expect=2e-87]; ENSG00000134250, NOTCH2, notch 2, [Score=305, Expect=5e-87]} {Mouse: ENSMUSG00000026923, Notch1, notch 1, [Score=312, Expect=1e-89]; ENSMUSG00000027878, Notch2, notch 2, [Score=300, Expect=9e-86]} {Dmel: FBgn0259685, crb, crumbs, [Score=291, Expect=1e-82]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=234, Expect=5e-64]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=236, Expect=9e-65]} {RNA1509_26892} {RNA1310_37026} {RNA815_11987.1}
4. MligTC455_40861 5298 110.38 Mlig455_009208

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.204

 STOM 2.481 - - 0.791 - 0.966 0.724 Mlig455_009208 {REF} {Length: 1586} {Pfam: SPFH domain / Band 7 family [PF01145.27, score=118.4]; SPFH domain-Band 7 family [PF13421.8, score=20.1]} {Human: ENSG00000148175, STOM, stomatin, [Score=251, Expect=2e-82]; ENSG00000133115, STOML3, stomatin like 3, [Score=241, Expect=2e-78]} {Mouse: ENSMUSG00000026880, Stom, stomatin, [Score=248, Expect=2e-81]} {Dmel: FBgn0260657, CG42540, [Score=261, Expect=3e-85]} {Celegans: WBGene00006063, sto-1, Stomatin-1, [Score=261, Expect=4e-86]} {Smed: dd_Smed_v6_6396_0_1, dd_Smed_v6_6396_0_1, [Score=291, Expect=1e-98]} {RNA1509_21648} {RNA1310_25287.1} {RNA815_14054.1}
5. MligTC455_19469 1933 40.28 Mlig455_033867

Neo: -

Age: Down-Up-Down

 GLRX 2.425 0.726 - - - 0.740 0.959 Mlig455_033867 {REF} {Length: 644} {TRANSSPLICED} {Pfam: Glutaredoxin [PF00462.26, score=31.4]} {Human: ENSG00000173221, GLRX, glutaredoxin, [Score=57.0, Expect=2e-11]} {Mouse: ENSMUSG00000021591, Glrx, glutaredoxin, [RH, Score=58.2, Expect=7e-12]} {Dmel: FBgn0036820, Grx1, Glutaredoxin 1, [Score=53.9, Expect=3e-10]} {Celegans: WBGene00021331, glrx-10, GLutaRedoXin, [Score=66.6, Expect=2e-15]} {Smed: dd_Smed_v6_4565_0_1, dd_Smed_v6_4565_0_1, [RH, Score=83.2, Expect=5e-22]} {RNA1509_44650} {RNA1310_53861.1, RNA1509_44650} {RNA1509_44650, RNA815_27537}
6. MligTC455_19236 1684 35.09 Mlig455_039926

Neo: -

Age: -

 KDM8 2.415 - - - 0.710 0.755 0.950 Mlig455_039926 {REF} {Length: 3994} {Pfam: Cupin-like domain [PF13621.8, score=106.1]; EF hand [PF13202.8, score=27.3]; EF hand [PF00036.34, score=23.9]; EF-hand domain pair [PF13499.8, score=21.5]} {Human: ENSG00000155666, KDM8, lysine demethylase 8, [Score=63.2, Expect=4e-10]} {Mouse: ENSMUSG00000030752, Kdm8, lysine (K)-specific demethylase 8, [Score=63.9, Expect=1e-10]} {Dmel: FBgn0035166, CG13902, [Score=68.6, Expect=3e-12]} {Smed: dd_Smed_v6_11273_0_1, dd_Smed_v6_11273_0_1, [Score=224, Expect=1e-68]} {RNA1509_36468, RNA1509_6200} {RNA1310_20380, RNA1509_36468} {RNA1509_36468, RNA815_8139}
7. MligTC455_51394 154 3.21 Mlig455_016630

Neo: -

Age: Down-Up-Down

 POFUT2 1.82 - - - 0.950 0.870 - Mlig455_016630 {REF} {Length: 4830} {Pfam: GDP-fucose protein O-fucosyltransferase [PF10250.11, score=177.7]} {Human: ENSG00000186866, POFUT2, protein O-fucosyltransferase 2, [RH, Score=305, Expect=2e-99]} {Mouse: ENSMUSG00000020260, Pofut2, protein O-fucosyltransferase 2, [RH, Score=308, Expect=7e-101]} {Dmel: FBgn0027791, O-fut2, O-fucosyltransferase 2, [RH, Score=241, Expect=2e-74]} {Celegans: WBGene00010757, pad-2, GDP-fucose protein O-fucosyltransferase 2, [RH, Score=279, Expect=8e-90]} {Smed: dd_Smed_v6_9239_0_1, dd_Smed_v6_9239_0_1, [RH, Score=257, Expect=2e-81]} {RNA1509_19497, RNA1509_27235} {RNA1310_18628.1, RNA1509_19497, RNA1509_27235} {RNA1509_19497, RNA1509_27235, RNA815_10021}
8. MligTC455_40158 660 13.75 Mlig455_011040

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.454

Region-enriched R2: 1.509/0.04515

 ZMYND12 1.81 - - 0.820 - 0.990 - Mlig455_011040 {REF} {Length: 2385} {Pfam: MYND finger [PF01753.20, score=36.1]; MalT-like TPR region [PF17874.3, score=22.6]; Tetratricopeptide repeat [PF07719.19, score=22.5]; Tetratricopeptide repeat [PF00515.30, score=21.0]; Tetratricopeptide repeat [PF13424.8, score=21.0]} {Human: ENSG00000066185, ZMYND12, zinc finger MYND-type containing 12, [RH, Score=286, Expect=1e-93]} {Mouse: ENSMUSG00000070806, Zmynd12, zinc finger, MYND domain containing 12, [RH, Score=297, Expect=4e-98]} {Smed: dd_Smed_v6_10079_0_1, dd_Smed_v6_10079_0_1, [RH, Score=393, Expect=4e-136]} {RNA1509_3913, RNA1509_42555} {RNA1310_12452, RNA1509_3913, RNA1509_42555} {RNA1509_3913, RNA1509_42555, RNA815_3855}
9. MligTC455_21914 6688 139.34 Mlig455_041245, Mlig455_053092

Neo: -

Age: -

 FLNB 1.768 - - 0.807 - 0.961 -

Mlig455_041245 {REF} {Length: 5323} {Pfam: Filamin/ABP280 repeat [PF00630.21, score=341.5]} {Human: ENSG00000136068, FLNB, filamin B, [Score=238, Expect=1e-62]; ENSG00000196924, FLNA, filamin A, [Score=230, Expect=3e-60]} {Mouse: ENSMUSG00000031328, Flna, filamin, alpha, [Score=243, Expect=1e-64]} {Dmel: FBgn0028371, jbug, jitterbug, [RH, Score=429, Expect=2e-124]} {Celegans: WBGene00016006, fln-2, FiLamiN (Actin binding protein) homolog, [RH, Score=469, Expect=3e-139]} {Smed: dd_Smed_v6_14262_0_1, dd_Smed_v6_14262_0_1, [RH, Score=265, Expect=2e-73]} {RNA1509_1061} {RNA1310_1557.1, RNA1509_1061} {RNA1509_1061, RNA815_236}

Mlig455_053092 {REF} {Length: 4805} {Pfam: Filamin/ABP280 repeat [PF00630.21, score=342.0]} {Human: ENSG00000136068, FLNB, filamin B, [Score=239, Expect=4e-63]; ENSG00000196924, FLNA, filamin A, [Score=231, Expect=2e-60]} {Mouse: ENSMUSG00000031328, Flna, filamin, alpha, [Score=244, Expect=9e-65]} {Dmel: FBgn0028371, jbug, jitterbug, [RH, Score=430, Expect=1e-124]} {Celegans: WBGene00016006, fln-2, FiLamiN (Actin binding protein) homolog, [RH, Score=471, Expect=8e-140]} {Smed: dd_Smed_v6_14262_0_1, dd_Smed_v6_14262_0_1, [RH, Score=267, Expect=2e-74]} {RNA1509_1061} {RNA1310_1557.1} {RNA815_236}
10. MligTC455_44950 7633 159.02 Mlig455_035700, Mlig455_035793

Neo: -

Age: -

 MCEE 1.766 - - 0.816 - 0.950 -

Mlig455_035700 {REF} {Length: 1051} {TRANSSPLICED} {Pfam: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily [PF13669.8, score=67.4]; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily [PF00903.27, score=32.2]; Glyoxalase-like domain [PF13468.8, score=24.0]} {Human: ENSG00000124370, MCEE, methylmalonyl-CoA epimerase, [RH, Score=187, Expect=2e-60]} {Mouse: ENSMUSG00000033429, Mcee, methylmalonyl CoA epimerase, [RH, Score=188, Expect=6e-61]} {Celegans: WBGene00008415, mce-1, Methylmalonyl-CoA Epimerase; Mitochondrial methylmalonyl-CoA epimerase, [RH, Score=153, Expect=7e-48]} {Smed: dd_Smed_v6_3348_1_2, dd_Smed_v6_3348_1_2, [RH, Score=208, Expect=1e-69]} {RNA1509_2628} {RNA1310_20496.1} {RNA815_15365}

Mlig455_035793 {REF} {Length: 1052} {TRANSSPLICED} {Pfam: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily [PF13669.8, score=67.4]; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily [PF00903.27, score=32.2]; Glyoxalase-like domain [PF13468.8, score=24.0]} {Human: ENSG00000124370, MCEE, methylmalonyl-CoA epimerase, [RH, Score=187, Expect=2e-60]} {Mouse: ENSMUSG00000033429, Mcee, methylmalonyl CoA epimerase, [RH, Score=188, Expect=6e-61]} {Celegans: WBGene00008415, mce-1, Methylmalonyl-CoA Epimerase; Mitochondrial methylmalonyl-CoA epimerase, [RH, Score=153, Expect=7e-48]} {Smed: dd_Smed_v6_3348_1_2, dd_Smed_v6_3348_1_2, [RH, Score=208, Expect=1e-69]} {RNA1509_20492, RNA1509_25178, RNA1509_2628, RNA1509_27226} {RNA1310_20496.1, RNA1509_20492, RNA1509_25178, RNA1509_2628, RNA1509_27226} {RNA1509_20492, RNA1509_25178, RNA1509_2628, RNA1509_27226, RNA815_15365}
11. MligTC455_38593 2042 42.54 Mlig455_010843

Neo: -

Age: -

 1.756 - - - - 0.951 0.805 Mlig455_010843 {REF} {Length: 1508} {Pfam: Wnt and FGF inhibitory regulator [PF13908.8, score=19.2]} {RNA1509_23850, RNA1509_53025, RNA1509_55041, RNA1509_9732} {RNA1310_24247.1, RNA1509_23850, RNA1509_53025, RNA1509_55041, RNA1509_9732} {RNA1509_23850, RNA1509_53025, RNA1509_55041, RNA1509_9732, RNA815_10484}
12. MligTC455_37805 538 11.21 Mlig455_023154, Mlig455_023305

Neo: -

Age: Down-Up-Down

Region-enriched R3: 4.602/0.00000

 TRPM3 1.742 - - 0.781 - 0.961 -

Mlig455_023154 {REF} {Length: 1152} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=28.1]; Ankyrin repeats (3 copies) [PF12796.9, score=24.2]; Ankyrin repeats (many copies) [PF13857.8, score=24.1]} {RNA1509_20239} {RNA1310_2354} {RNA815_15927}

Mlig455_023305 {REF} {Length: 6732} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=101.6]; Ankyrin repeats (many copies) [PF13637.8, score=81.7]; Ankyrin repeats (many copies) [PF13857.8, score=54.3]; Ankyrin repeat [PF13606.8, score=51.8]; Ankyrin repeat [PF00023.32, score=33.5]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=58.2, Expect=2e-07]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=56.6, Expect=5e-07]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=56.2, Expect=5e-07]; ENSG00000135299, ANKRD6, ankyrin repeat domain 6, [Score=56.2, Expect=2e-07]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=58.9, Expect=7e-08]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=58.2, Expect=1e-07]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=59.7, Expect=3e-08]} {Celegans: WBGene00013835, mlt-4, Molting protein MLT-4, [Score=58.2, Expect=4e-08]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=93.2, Expect=7e-19]} {RNA1509_20239} {RNA1310_2354} {RNA815_15927}
13. MligTC455_28186 542 11.3 Mlig455_035664

Neo: -

Age: -

 1.737 - - - 0.952 0.785 - Mlig455_035664 {REF} {Length: 7326} {TRANSSPLICED} {Pfam: Helitron helicase-like domain at N-terminus [PF14214.8, score=94.6]} {Mouse: ENSMUSG00000070331, Qrich2, glutamine rich 2, [Score=64.7, Expect=2e-09]} {RNA1509_51272} {RNA1310_363} {RNA815_104.1}
14. MligTC455_28191 561 11.69 Mlig455_071059

Neo: -

Age: Up-Down-Down

 ACRV1 1.717 - - - 0.960 0.757 - Mlig455_071059 {REF} {Length: 7291} {Human: ENSG00000134940, ACRV1, acrosomal vesicle protein 1, [Score=50.1, Expect=1e-05]} {Mouse: ENSMUSG00000070331, Qrich2, glutamine rich 2, [Score=91.7, Expect=6e-18]} {RNA1509_51272} {RNA1310_143.1} {RNA815_104.1}
15. MligTC455_09626 272 5.66 Mlig455_026162

Neo: -

Age: -

 1.705 - - - 0.754 0.951 - Mlig455_026162 {REF} {Length: 2431} {TRANSSPLICED} {Pfam: Glycosyltransferase family 92 [PF01697.29, score=105.0]} {Celegans: WBGene00019763, galt-1, Beta-1,4-galactosyltransferase galt-1, [RH, Score=103, Expect=8e-24]} {Smed: dd_Smed_v6_12154_0_1, dd_Smed_v6_12154_0_1, [RH, Score=214, Expect=8e-65]} {RNA1509_16641, RNA1509_37951} {RNA1310_21332, RNA1509_37951} {RNA1509_37951, RNA815_8309}
16. MligTC455_49179 1230 25.62 Mlig455_000575, Mlig455_030372

Neo: -

Age: Down-Up-Down

 GRIK1 1.672 - - 0.715 - 0.957 -

Mlig455_000575 {REF} {Length: 3002} {Pfam: Ligand-gated ion channel [PF00060.28, score=56.2]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=22.4]; Receptor family ligand binding region [PF01094.30, score=21.2]} {Human: ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=76.6, Expect=1e-13]; ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=73.6, Expect=1e-12]} {Mouse: ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=73.9, Expect=6e-13]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=73.2, Expect=1e-12]} {Celegans: WBGene00001613, glr-2, Glutamate receptor 2, [Score=66.2, Expect=9e-11]} {Smed: dd_Smed_v6_10048_0_1, dd_Smed_v6_10048_0_1, [Score=71.2, Expect=1e-12]} {RNA1509_5131} {RNA1310_3885, RNA1509_5131} {RNA1509_5131, RNA815_1090.1}

Mlig455_030372 {REF} {Length: 3002} {Pfam: Ligand-gated ion channel [PF00060.28, score=56.2]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=22.5]; Receptor family ligand binding region [PF01094.30, score=21.4]} {Human: ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=76.6, Expect=1e-13]; ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=73.6, Expect=1e-12]} {Mouse: ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=73.9, Expect=6e-13]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=73.2, Expect=1e-12]} {Celegans: WBGene00001613, glr-2, Glutamate receptor 2, [Score=65.5, Expect=1e-10]} {Smed: dd_Smed_v6_10048_0_1, dd_Smed_v6_10048_0_1, [Score=71.6, Expect=1e-12]} {RNA1509_5131} {RNA1310_3885} {RNA815_1090.1}
17. MligTC455_40424 474 9.88 Mlig455_029322

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.888

 CALM2 1.667 - - - - 0.958 0.709 Mlig455_029322 {REF} {Length: 1020} {Pfam: EF-hand domain pair [PF13833.8, score=26.5]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=69.7, Expect=2e-14]; ENSG00000160014, CALM3, calmodulin 3, [Score=68.9, Expect=2e-14]; ENSG00000198668, CALM1, calmodulin 1, [Score=68.9, Expect=2e-14]; ENSG00000178363, CALML3, calmodulin like 3, [Score=68.2, Expect=3e-14]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=70.5, Expect=1e-14]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=68.9, Expect=1e-14]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=68.9, Expect=1e-14]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=67.4, Expect=3e-14]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=67.8, Expect=2e-14]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=67.8, Expect=2e-14]} {RNA1509_16604} {RNA1310_33121} {RNA815_17390}
18. MligTC455_43795 837 17.43 Mlig455_017342

Neo: -

Age: logFC(26M/2M)=-0.242

 1.658 - - - 0.951 0.707 - Mlig455_017342 {REF} {Length: 4372} {RNA1509_16184} {RNA1310_21121} {RNA815_4280.1}
19. MligTC455_40157 601 12.52 Mlig455_011008

Neo: -

Age: -

 ZMYND12 0.972 - - - - 0.972 - Mlig455_011008 {REF} {Length: 2345} {Pfam: MYND finger [PF01753.20, score=36.1]; MalT-like TPR region [PF17874.3, score=22.6]; Tetratricopeptide repeat [PF07719.19, score=22.5]; Tetratricopeptide repeat [PF00515.30, score=21.0]; Tetratricopeptide repeat [PF13424.8, score=21.0]} {Human: ENSG00000066185, ZMYND12, zinc finger MYND-type containing 12, [RH, Score=286, Expect=1e-93]} {Mouse: ENSMUSG00000070806, Zmynd12, zinc finger, MYND domain containing 12, [RH, Score=297, Expect=4e-98]} {Smed: dd_Smed_v6_10079_0_1, dd_Smed_v6_10079_0_1, [RH, Score=393, Expect=4e-136]} {RNA1509_3913} {RNA1310_12452} {RNA815_3855}
20. MligTC455_31890 210 4.38 Mlig455_070942

Neo: -

Age: logFC(26M/2M)=-0.564

 0.967 - - - - 0.967 - Mlig455_070942 {REF} {Length: 2335} {Pfam: MULE transposase domain [PF10551.11, score=21.4]; Domain of unknown function (DUF4806) [PF16064.7, score=19.0]} {Smed: dd_Smed_v6_24877_0_1, dd_Smed_v6_24877_0_1, [Score=52.0, Expect=2e-08]} {RNA1509_28268} {RNA1310_1293.1} {RNA815_1077}
21. MligTC455_31673 2190 45.63 Mlig455_020494, Mlig455_020496, Mlig455_021456, Mlig455_022005, Mlig455_028753, Mlig455_029272, Mlig455_032615, Mlig455_035661, Mlig455_035663, Mlig455_040170, Mlig455_041027, Mlig455_042568, Mlig455_052047, Mlig455_052049, Mlig455_060462, Mlig455_060472, Mlig455_060475, Mlig455_062821, Mlig455_063990, Mlig455_071051, Mlig455_071053

Neo: -

Age: -

 0.964 - - - 0.964 - -

Mlig455_020494 {REF} {Length: 3502} {NoTransDecoderORF} {RNA1509_43132} {RNA1310_143.1} {RNA815_12188}

Mlig455_020496 {REF} {Length: 45} {NoTransDecoderORF} {RNA1509_51272} {RNA1310_18898} {RNA815_26166}

Mlig455_021456 {REF} {Length: 6612} {RNA1509_43132} {RNA1310_143.1} {RNA815_12188}

Mlig455_022005 {REF} {Length: 5643} {NoTransDecoderORF} {RNA1509_46} {RNA1310_143.1} {RNA815_12188}

Mlig455_028753 {REF} {Length: 4224} {NoTransDecoderORF} {RNA1509_43132} {RNA1310_143.1} {RNA815_12188}

Mlig455_029272 {REF} {Length: 842} {NoTransDecoderORF} {RNA1509_43624} {RNA1310_9389.2} {RNA815_12646}

Mlig455_032615 {REF} {Length: 1323} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_43132} {RNA1310_143.1} {RNA815_12188}

Mlig455_035661 {REF} {Length: 2146} {NoTransDecoderORF} {RNA1509_43132} {RNA1310_143.1} {RNA815_12188}

Mlig455_035663 {REF} {Length: 1967} {NoTransDecoderORF} {RNA1509_10119} {RNA1310_143.1} {RNA815_11686}

Mlig455_040170 {REF} {Length: 2245} {NoTransDecoderORF} {RNA1509_43132} {RNA1310_143.1} {RNA815_12188}

Mlig455_041027 {REF} {Length: 2951} {RNA1509_46} {RNA1310_143.1} {RNA815_12188}

Mlig455_042568 {REF} {Length: 3443} {NoTransDecoderORF} {RNA1509_46, RNA1509_6737} {RNA1310_143.1, RNA1509_6737} {RNA1509_6737, RNA815_12188}

Mlig455_052047 {REF} {Length: 2362} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_40407} {RNA1310_143.1, RNA1509_40407} {RNA1509_40407, RNA815_12188}

Mlig455_052049 {REF} {Length: 2860} {NoTransDecoderORF} {RNA1509_43132} {RNA1310_143.1} {RNA815_12188}

Mlig455_060462 {REF} {Length: 1740} {NoTransDecoderORF} {RNA1509_43132} {RNA1310_143.1} {RNA815_12188}

Mlig455_060472 {REF} {Length: 2246} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_43132} {RNA1310_143.1} {RNA815_12188}

Mlig455_060475 {REF} {Length: 320} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_43624} {RNA1310_18898} {RNA815_12646}

Mlig455_062821 {REF} {Length: 1726} {NoTransDecoderORF} {RNA1509_43132} {RNA1310_143.1} {RNA815_12188}

Mlig455_063990 {REF} {Length: 1968} {NoTransDecoderORF} {RNA1509_10119, RNA1509_22165, RNA1509_43624} {RNA1310_143.1, RNA1509_10119, RNA1509_22165, RNA1509_43624} {RNA1509_10119, RNA1509_22165, RNA1509_43624, RNA815_11686}

Mlig455_071051 {REF} {Length: 1795} {NoTransDecoderORF} {RNA1509_43132} {RNA1310_143.1} {RNA815_12188}

Mlig455_071053 {REF} {Length: 339} {NoTransDecoderORF} {RNA1509_51208} {RNA1310_52445} {RNA815_23064}
22. MligTC455_28192 612 12.76 Mlig455_032616, Mlig455_060467, Mlig455_060474

Neo: -

Age: -

 PIF1 0.962 - - - 0.962 - -

Mlig455_032616 {REF} {Length: 2558} {TRANSSPLICED} {RNA1509_51272} {RNA1310_363} {RNA815_104.1}

Mlig455_060467 {REF} {Length: 508} {Pfam: PIF1-like helicase [PF05970.16, score=120.8]; Helitron helicase-like domain at N-terminus [PF14214.8, score=94.4]; AAA domain [PF13604.8, score=54.2]; AAA domain [PF13245.8, score=28.8]; Helicase [PF02689.16, score=24.6]; UvrD-like helicase C-terminal domain [PF13538.8, score=23.9]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=130, Expect=3e-30]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=134, Expect=1e-31]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=130, Expect=2e-30]} {Celegans: WBGene00004028, pif-1, ATP-dependent DNA helicase PIF1, [Score=132, Expect=1e-31]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=128, Expect=8e-30]} {RNA1509_51272} {RNA1310_363} {RNA815_104.1}

Mlig455_060474 {REF} {Length: 1944} {TRANSSPLICED} {RNA1509_51272} {RNA1310_363} {RNA815_104.1}
23. MligTC455_31889 414 8.63 Mlig455_027646, Mlig455_065376

Neo: -

Age: -

 0.962 - - - - 0.962 -

Mlig455_027646 {REF} {Length: 613} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4806) [PF16064.7, score=20.2]} {RNA1509_2283} {RNA1310_1293.1} {RNA815_1077}

Mlig455_065376 {REF} {Length: 615} {TRANSSPLICED} {RNA1509_37997} {RNA1310_1293.1} {RNA815_1077}
24. MligTC455_28068 20 0.42 Mlig455_055818

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_055818 {REF} {Length: 1888} {RNA1509_27021} {RNA1310_14467} {RNA815_5428.1}
25. MligTC455_35175 109 2.26 Mlig455_046605

Neo: -

Age: -

 0.956 - - - 0.956 - - Mlig455_046605 {REF} {Length: 1607} {RNA1509_37799} {RNA1310_173.2} {RNA815_14575}
26. MligTC455_17139 412 8.57 Mlig455_029725

Neo: -

Age: -

 LRRCC1 0.954 - - - 0.954 - - Mlig455_029725 {REF} {Length: 3387} {TRANSSPLICED} {Pfam: Leucine Rich repeats (2 copies) [PF12799.9, score=57.5]; Leucine rich repeat [PF13855.8, score=45.3]; Leucine-rich repeat [PF14580.8, score=37.8]; Leucine Rich repeat [PF13516.8, score=22.2]} {Human: ENSG00000133739, LRRCC1, leucine rich repeat and coiled-coil centrosomal protein 1, [RH, Score=388, Expect=4e-118]} {Mouse: ENSMUSG00000027550, Lrrcc1, leucine rich repeat and coiled-coil domain containing 1, [RH, Score=379, Expect=4e-115]} {Dmel: FBgn0032163, TbCMF46, [Score=65.5, Expect=2e-10]} {Celegans: WBGene00011637, sds-22, Protein phosphatase 1 regulatory subunit SDS22 homolog, [Score=60.1, Expect=3e-09]} {Smed: dd_Smed_v6_10086_0_1, dd_Smed_v6_10086_0_1, [RH, Score=436, Expect=3e-137]} {RNA1509_17986, RNA1509_44459, RNA1509_7470} {RNA1310_3688.1, RNA1509_17986, RNA1509_44459, RNA1509_7470} {RNA1509_17986, RNA1509_44459, RNA1509_7470, RNA815_6323}
27. MligTC455_39945 646 13.45 Mlig455_021829

Neo: -

Age: Down-Up-Down

 CEP89 0.953 - - - - 0.953 - Mlig455_021829 {REF} {Length: 4593} {Human: ENSG00000121289, CEP89, centrosomal protein 89, [Score=99.8, Expect=3e-21]} {Mouse: ENSMUSG00000023072, Cep89, centrosomal protein 89, [RH, Score=105, Expect=4e-23]} {Smed: dd_Smed_v6_13073_0_3, dd_Smed_v6_13073_0_3, [Score=68.6, Expect=6e-12]} {RNA1509_11946} {RNA1310_7293.1, RNA1509_11946} {RNA1509_11946, RNA815_3039.1}
28. MligTC455_51344 1909 39.78 Mlig455_050206, Mlig455_066949

Neo: -

Age: -

Region-enriched R4: 1.275/0.01137
Region-enriched R6: 1.017/0.03148

 PRR5-ARHGAP8 0.953 - - - 0.953 - -

Mlig455_050206 {REF} {Length: 3344} {TRANSSPLICED} {Pfam: RhoGAP domain [PF00620.29, score=135.0]; Divergent CRAL/TRIO domain [PF13716.8, score=130.5]; CRAL/TRIO domain [PF00650.22, score=33.9]} {Human: ENSG00000248405, PRR5-ARHGAP8, PRR5-ARHGAP8 readthrough, [RH, Score=365, Expect=2e-120]; ENSG00000241484, ARHGAP8, Rho GTPase activating protein 8, [RH, Score=364, Expect=1e-121]; ENSG00000175220, ARHGAP1, Rho GTPase activating protein 1, [RH, Score=347, Expect=1e-114]} {Mouse: ENSMUSG00000078954, Arhgap8, Rho GTPase activating protein 8, [RH, Score=352, Expect=7e-117]; ENSMUSG00000027247, Arhgap1, Rho GTPase activating protein 1, [RH, Score=348, Expect=9e-115]} {Dmel: FBgn0036257, RhoGAP68F, Rho GTPase activating protein at 68F, [RH, Score=251, Expect=1e-77]} {Celegans: WBGene00012203, rga-1, Rho GTPase Activating protein, [RH, Score=273, Expect=3e-86]} {Smed: dd_Smed_v6_9467_0_1, dd_Smed_v6_9467_0_1, [RH, Score=448, Expect=2e-154]} {RNA1509_9606} {RNA1310_13022.1} {RNA815_3889}

Mlig455_066949 {REF} {Length: 3476} {TRANSSPLICED} {Pfam: Divergent CRAL/TRIO domain [PF13716.8, score=130.5]; RhoGAP domain [PF00620.29, score=125.8]; CRAL/TRIO domain [PF00650.22, score=34.0]} {Human: ENSG00000248405, PRR5-ARHGAP8, PRR5-ARHGAP8 readthrough, [Score=339, Expect=4e-110]; ENSG00000241484, ARHGAP8, Rho GTPase activating protein 8, [Score=338, Expect=2e-111]; ENSG00000175220, ARHGAP1, Rho GTPase activating protein 1, [Score=323, Expect=1e-105]} {Mouse: ENSMUSG00000078954, Arhgap8, Rho GTPase activating protein 8, [Score=325, Expect=1e-106]; ENSMUSG00000027247, Arhgap1, Rho GTPase activating protein 1, [Score=324, Expect=8e-106]} {Dmel: FBgn0036257, RhoGAP68F, Rho GTPase activating protein at 68F, [Score=231, Expect=1e-70]} {Celegans: WBGene00012203, rga-1, Rho GTPase Activating protein, [Score=257, Expect=2e-80]} {Smed: dd_Smed_v6_9467_0_1, dd_Smed_v6_9467_0_1, [Score=411, Expect=3e-140]} {RNA1509_57416, RNA1509_9606} {RNA1310_13022.1, RNA1509_57416} {RNA1509_57416, RNA815_3889}
29. MligTC455_25932 352 7.34 Mlig455_066601

Neo: -

Age: -

 ANK2 0.952 - - - 0.952 - - Mlig455_066601 {REF} {Length: 4142} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=172.8]; Ankyrin repeats (many copies) [PF13637.8, score=120.0]; Ankyrin repeats (many copies) [PF13857.8, score=110.4]; Ankyrin repeat [PF00023.32, score=97.6]; Ankyrin repeat [PF13606.8, score=97.6]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=108, Expect=3e-23]; ENSG00000151150, ANK3, ankyrin 3, [Score=103, Expect=9e-22]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=108, Expect=2e-23]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=106, Expect=1e-22]} {Dmel: FBgn0039590, CG10011, [Score=98.6, Expect=2e-20]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=99.4, Expect=5e-21]} {Smed: dd_Smed_v6_2072_0_8, dd_Smed_v6_2072_0_8, [Score=89.7, Expect=5e-18]} {RNA1509_28623} {RNA1310_2532.1, RNA1509_28623} {RNA1509_28623, RNA815_1317.1}
30. MligTC455_20838 235 4.89 Mlig455_022987

Neo: -

Age: -

 H6PD 0.951 - - - - 0.951 - Mlig455_022987 {REF} {Length: 2684} {TRANSSPLICED} {Pfam: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase [PF01182.22, score=105.1]; Glucose-6-phosphate dehydrogenase, C-terminal domain [PF02781.18, score=96.2]; Glucose-6-phosphate dehydrogenase, NAD binding domain [PF00479.24, score=82.3]} {Human: ENSG00000049239, H6PD, hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase, [Score=210, Expect=1e-56]} {Mouse: ENSMUSG00000028980, H6pd, hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase), [Score=222, Expect=5e-61]} {Dmel: FBgn0004057, Zw, Zwischenferment, [Score=142, Expect=3e-35]} {Celegans: WBGene00007108, gspd-1, Glucose-6-phosphate 1-dehydrogenase, [Score=133, Expect=1e-32]} {Smed: dd_Smed_v6_2965_0_1, dd_Smed_v6_2965_0_1, [Score=132, Expect=2e-32]} {RNA1509_16416} {RNA1310_9105, RNA1509_16416} {RNA1509_16416, RNA815_2264.1}
31. MligTC455_26968 689 14.35 Mlig455_020597

Neo: -

Age: -

Region-enriched R4: 1.781/0.03659

 0.951 - - - - 0.951 - Mlig455_020597 {REF} {Length: 4103} {Pfam: RNase H [PF00075.26, score=41.7]} {RNA1509_13356} {RNA1310_570.1} {RNA815_134.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA