Data search
Results for MligTC455_19365
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_19365 | 368 | 7.66 | Mlig455_033543 | Neo: - Age: Up-Up-Down |
LMX1A | Mlig455_033543 {REF} {Length: 3159} {Pfam: LIM domain [PF00412.24, score=80.9]; Homeodomain [PF00046.31, score=23.3]} {Human: ENSG00000162761, LMX1A, LIM homeobox transcription factor 1 alpha, [Score=145, Expect=6e-40]; ENSG00000136944, LMX1B, LIM homeobox transcription factor 1 beta, [Score=145, Expect=3e-40]} {Mouse: ENSMUSG00000038765, Lmx1b, LIM homeobox transcription factor 1 beta, [Score=145, Expect=2e-40]; ENSMUSG00000026686, Lmx1a, LIM homeobox transcription factor 1 alpha, [Score=141, Expect=6e-39]} {Dmel: FBgn0052105, Lmx1a, LIM homeobox transcription factor 1 alpha, [Score=148, Expect=5e-40]} {Celegans: WBGene00002988, lim-6, LIM domain family, [Score=112, Expect=1e-28]} {Smed: dd_Smed_v6_8252_0_1, dd_Smed_v6_8252_0_1, [Score=99.0, Expect=1e-23]} {RNA1509_28203} {RNA1310_17583.1} {RNA815_17757} |
Cumulative graph for MligTC455_19365
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.866 | 3.239 | 0.15712 | 0.77592 | |
| RegionR2 | 0.169 | 3.239 | 0.73196 | 1.00000 | |
| RegionR3 | 0.002 | 3.239 | 0.99224 | 1.00000 | |
| RegionR4 | 0.677 | 3.239 | 0.14874 | 0.39771 | |
| RegionR5 | 0.62 | 3.239 | 0.09482 | 0.29456 | |
| RegionR6 | 0.601 | 3.239 | 0.14690 | 0.68423 | |
| RegionR7 | 0.226 | 3.239 | 0.66793 | 1.00000 | |
| RegionR8 | -0.43 | 3.239 | 0.53144 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.015 | 3.239 | 0.23569 | 0.96556 | |
| RegenerationR2 | -0.693 | 3.239 | 0.05952 | 0.40085 | |
| RegenerationR3 | -0.613 | 3.239 | 0.16554 | 0.59968 | |
| RegenerationR4 | -1.191 | 3.239 | 0.00902 | 0.14280 | |
| RegenerationR5 | -0.634 | 3.239 | 0.09580 | 0.47409 | |
| RegenerationR6 | -1.051 | 3.239 | 0.02226 | 0.18511 | |
| RegenerationBL | -0.675 | 3.239 | 0.24583 | 0.60058 | |
| RegenerationTP | -1.035 | 3.239 | 0.12831 | 0.54052 |
Genes with expression patterns similar to MligTC455_19365
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_19365 | 368 | 7.66 | Mlig455_033543 | Neo: - Age: Up-Up-Down |
LMX1A | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_033543 {REF} {Length: 3159} {Pfam: LIM domain [PF00412.24, score=80.9]; Homeodomain [PF00046.31, score=23.3]} {Human: ENSG00000162761, LMX1A, LIM homeobox transcription factor 1 alpha, [Score=145, Expect=6e-40]; ENSG00000136944, LMX1B, LIM homeobox transcription factor 1 beta, [Score=145, Expect=3e-40]} {Mouse: ENSMUSG00000038765, Lmx1b, LIM homeobox transcription factor 1 beta, [Score=145, Expect=2e-40]; ENSMUSG00000026686, Lmx1a, LIM homeobox transcription factor 1 alpha, [Score=141, Expect=6e-39]} {Dmel: FBgn0052105, Lmx1a, LIM homeobox transcription factor 1 alpha, [Score=148, Expect=5e-40]} {Celegans: WBGene00002988, lim-6, LIM domain family, [Score=112, Expect=1e-28]} {Smed: dd_Smed_v6_8252_0_1, dd_Smed_v6_8252_0_1, [Score=99.0, Expect=1e-23]} {RNA1509_28203} {RNA1310_17583.1} {RNA815_17757} |
| 2. | MligTC455_47747 | 1085 | 22.6 | Mlig455_018594 | Neo: - Age: - Region-enriched R5: 1.797/0.00282 |
TMEM243 | 2.627 | - | - | 0.878 | 0.961 | - | 0.788 | Mlig455_018594 {REF} {Length: 1402} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF2678) [PF10856.10, score=135.3]} {Human: ENSG00000135185, TMEM243, transmembrane protein 243, [RH, Score=125, Expect=3e-38]} {Mouse: ENSMUSG00000079659, Tmem243, transmembrane protein 243, mitochondrial, [RH, Score=111, Expect=9e-33]} {RNA1509_19411, RNA1509_28627, RNA1509_52894, RNA1509_55931, RNA1509_57400} {RNA1310_25206.1, RNA1509_19411, RNA1509_28627, RNA1509_52894, RNA1509_55931, RNA1509_57400} {RNA1509_19411, RNA1509_28627, RNA1509_52894, RNA1509_55931, RNA1509_57400, RNA815_6775.1} |
| 3. | MligTC455_47461 | 351 | 7.31 | Mlig455_059023 | Neo: - Age: - |
KLHDC2 | 0.973 | - | - | - | - | - | 0.973 | Mlig455_059023 {REF} {Length: 3259} {TRANSSPLICED} {Pfam: Galactose oxidase, central domain [PF13418.8, score=85.8]; Kelch motif [PF13964.8, score=72.1]; Kelch motif [PF13854.8, score=60.0]; Galactose oxidase, central domain [PF13415.8, score=51.1]; Kelch motif [PF07646.17, score=40.8]; Kelch motif [PF01344.27, score=38.8]} {Human: ENSG00000165516, KLHDC2, kelch domain containing 2, [RH, Score=124, Expect=3e-30]} {Mouse: ENSMUSG00000020978, Klhdc2, kelch domain containing 2, [RH, Score=125, Expect=7e-31]} {Dmel: FBgn0040344, CG3711, [Score=62.0, Expect=1e-09]} {Celegans: WBGene00009978, F53E4.1, [Score=59.3, Expect=4e-09]} {Smed: dd_Smed_v6_9892_0_1, dd_Smed_v6_9892_0_1, [RH, Score=96.7, Expect=2e-21]} {RNA1509_12374, RNA1509_47894} {RNA1310_7705.2, RNA1509_12374, RNA1509_47894} {RNA1509_12374, RNA1509_47894, RNA815_5080} |
| 4. | MligTC455_53143 | 370 | 7.71 | Mlig455_026463 | Neo: - |
SSUH2 | 0.963 | - | - | - | - | 0.963 | - | Mlig455_026463 {REF} {Length: 2529} {Human: ENSG00000125046, SSUH2, ssu-2 homolog (C. elegans), [Score=213, Expect=2e-64]} {Mouse: ENSMUSG00000034387, Ssu2, ssu-2 homolog (C. elegans), [Score=182, Expect=5e-53]} {RNA1509_6425} {RNA1310_10577} {RNA815_10006} |
| 5. | MligTC455_21140 | 812 | 16.92 | Mlig455_012908, Mlig455_012918 | Neo: - Age: Down-Up-Down |
AJM1 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_012908 {REF} {Length: 6957} {Human: ENSG00000232434, AJM1, apical junction component 1 homolog, [Score=62.4, Expect=8e-09]} {Mouse: ENSMUSG00000029419, Ajm1, apical junction component 1, [Score=63.9, Expect=2e-09]} {Dmel: FBgn0261802, CG42748, [Score=57.0, Expect=2e-07]} {RNA1509_13411, RNA1509_13662} {RNA1310_646, RNA1509_13411} {RNA1509_13411, RNA815_244} Mlig455_012918 {REF} {Length: 6960} {Human: ENSG00000232434, AJM1, apical junction component 1 homolog, [Score=62.4, Expect=7e-09]} {Mouse: ENSMUSG00000029419, Ajm1, apical junction component 1, [Score=63.9, Expect=2e-09]} {Dmel: FBgn0261802, CG42748, [Score=57.0, Expect=1e-07]} {RNA1509_13662} {RNA1310_646} {RNA815_244} |
| 6. | MligTC455_50025 | 312 | 6.51 | Mlig455_041593 | Neo: - Age: - Region-enriched R4: 2.535/0.01468 |
ATF7IP | 0.958 | - | - | - | - | - | 0.958 | Mlig455_041593 {REF} {Length: 4601} {TRANSSPLICED} {Pfam: Fibronectin-III type domain [PF16794.7, score=92.7]} {Human: ENSG00000171681, ATF7IP, activating transcription factor 7 interacting protein, [RH, Score=103, Expect=8e-22]} {Mouse: ENSMUSG00000030213, Atf7ip, activating transcription factor 7 interacting protein, [RH, Score=101, Expect=2e-21]} {Dmel: FBgn0027499, wde, windei, [RH, Score=90.9, Expect=4e-18]} {Smed: dd_Smed_v6_9372_0_1, dd_Smed_v6_9372_0_1, [RH, Score=76.6, Expect=1e-14]} {RNA1509_10271} {RNA1310_5928.1} {RNA815_4314.1} |
| 7. | MligTC455_48479 | 177 | 3.69 | Mlig455_021312 | Neo: Irradiation Age: Up-Down-Up |
TRIP4 | 0.953 | - | - | - | - | 0.953 | - | Mlig455_021312 {REF} {Length: 3329} {TRANSSPLICED} {Pfam: Putative zinc finger motif, C2HC5-type [PF06221.15, score=27.9]} {Human: ENSG00000103671, TRIP4, thyroid hormone receptor interactor 4, [Score=68.2, Expect=9e-12]} {Mouse: ENSMUSG00000032386, Trip4, thyroid hormone receptor interactor 4, [Score=68.2, Expect=1e-11]} {Dmel: FBgn0031115, CG11710, [Score=60.8, Expect=1e-09]} {Celegans: WBGene00000208, asc-1, ASC-1; Activating Signal Cointegrator homolog, [Score=51.6, Expect=8e-07]} {Smed: dd_Smed_v6_9211_0_1, dd_Smed_v6_9211_0_1, [Score=67.4, Expect=7e-12]} {RNA1509_40916} {RNA1310_15797} {RNA815_22836} |
| 8. | MligTC455_53802 | 483 | 10.06 | Mlig455_068495 | Neo: - Age: - |
FAM57A | 0.953 | - | - | - | 0.953 | - | - | Mlig455_068495 {REF} {Length: 2399} {Pfam: TLC domain [PF03798.18, score=86.2]} {Human: ENSG00000167695, FAM57A, family with sequence similarity 57 member A, [Score=118, Expect=3e-31]} {Mouse: ENSMUSG00000069808, Fam57a, family with sequence similarity 57, member A, [Score=127, Expect=8e-35]} {Dmel: FBgn0028480, CG17841, [Score=49.7, Expect=1e-06]} {RNA1509_50854} {RNA1310_27304.1} {RNA815_15510} |
| 9. | MligTC455_31405 | 1547 | 32.24 | Mlig455_021385 | Neo: - Age: Up-Down-Up |
0.95 | - | - | - | 0.950 | - | - | Mlig455_021385 {REF} {Length: 3364} {Pfam: Laminin EGF domain [PF00053.26, score=19.5]} {RNA1509_23420, RNA1509_24108, RNA1509_25322} {RNA1310_22595.1, RNA1509_23420, RNA1509_24108, RNA1509_25322} {RNA1509_23420, RNA1509_24108, RNA1509_25322, RNA815_9317} |
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