Data search
Results for MligTC455_53143
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_53143 | 370 | 7.71 | Mlig455_026463 | Neo: - |
SSUH2 | Mlig455_026463 {REF} {Length: 2529} {Human: ENSG00000125046, SSUH2, ssu-2 homolog (C. elegans), [Score=213, Expect=2e-64]} {Mouse: ENSMUSG00000034387, Ssu2, ssu-2 homolog (C. elegans), [Score=182, Expect=5e-53]} {RNA1509_6425} {RNA1310_10577} {RNA815_10006} |
Cumulative graph for MligTC455_53143
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.048 | 3.479 | 0.98267 | 1.00000 | |
| RegionR2 | 0.217 | 3.479 | 0.73390 | 1.00000 | |
| RegionR3 | 1.326 | 3.479 | 0.00288 | 0.06449 | |
| RegionR4 | 1.051 | 3.479 | 0.07381 | 0.25098 | |
| RegionR5 | 0.011 | 3.479 | 0.97541 | 1.00000 | |
| RegionR6 | 0.195 | 3.479 | 0.70296 | 1.00000 | |
| RegionR7 | -2.067 | 3.479 | 0.02018 | 0.26348 | |
| RegionR8 | -0.684 | 3.479 | 0.44561 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.942 | 3.479 | 0.25319 | 0.96710 | |
| RegenerationR2 | -0.15 | 3.479 | 0.74903 | 0.97294 | |
| RegenerationR3 | -1.206 | 3.479 | 0.01633 | 0.23402 | |
| RegenerationR4 | -0.651 | 3.479 | 0.24024 | 0.68881 | |
| RegenerationR5 | -0.14 | 3.479 | 0.77440 | 0.98015 | |
| RegenerationR6 | -0.327 | 3.479 | 0.54239 | 0.83414 | |
| RegenerationBL | -0.18 | 3.479 | 0.83786 | 1.00000 | |
| RegenerationTP | 0.111 | 3.479 | 0.90786 | 1.00000 |
Genes with expression patterns similar to MligTC455_53143
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_53143 | 370 | 7.71 | Mlig455_026463 | Neo: - |
SSUH2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_026463 {REF} {Length: 2529} {Human: ENSG00000125046, SSUH2, ssu-2 homolog (C. elegans), [Score=213, Expect=2e-64]} {Mouse: ENSMUSG00000034387, Ssu2, ssu-2 homolog (C. elegans), [Score=182, Expect=5e-53]} {RNA1509_6425} {RNA1310_10577} {RNA815_10006} |
| 2. | MligTC455_31356 | 301 | 6.28 | Mlig455_050963 | Neo: Int S/G2/M Age: - |
ENTPD5 | 1.762 | - | - | - | 0.805 | 0.957 | - | Mlig455_050963 {REF} {Length: 4174} {TRANSSPLICED} {Pfam: GDA1/CD39 (nucleoside phosphatase) family [PF01150.19, score=188.6]} {Human: ENSG00000187097, ENTPD5, ectonucleoside triphosphate diphosphohydrolase 5, [Score=275, Expect=5e-88]} {Mouse: ENSMUSG00000021236, Entpd5, ectonucleoside triphosphate diphosphohydrolase 5, [Score=273, Expect=2e-87]; ENSMUSG00000033068, Entpd6, ectonucleoside triphosphate diphosphohydrolase 6, [Score=264, Expect=2e-83]} {Dmel: FBgn0024947, NTPase, [Score=231, Expect=7e-71]} {Celegans: WBGene00010697, uda-1, Nucleoside-diphosphatase uda-1, [Score=218, Expect=1e-65]} {Smed: dd_Smed_v6_8855_0_1, dd_Smed_v6_8855_0_1, [Score=260, Expect=2e-82]} {RNA1509_34067} {RNA1310_26397.1, RNA1509_34067} {RNA1509_34067, RNA815_51045} |
| 3. | MligTC455_40821 | 347 | 7.22 | Mlig455_016792 | Neo: - |
0.982 | - | - | - | - | - | 0.982 | Mlig455_016792 {REF} {Length: 1267} {TRANSSPLICED} {Pfam: Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=48.2]; short chain dehydrogenase [PF00106.27, score=38.4]} {Dmel: FBgn0030968, CG7322, [Score=52.4, Expect=3e-08]} {Celegans: WBGene00000984, dhs-21, L-xylulose reductase, [Score=51.6, Expect=4e-08]} {RNA1509_44109} {RNA1310_24446.1} {RNA815_13838} | |
| 4. | MligTC455_08573 | 103 | 2.15 | Mlig455_065153 | Neo: - Age: - Regeneration-enriched R4: 9.639 |
0.965 | - | - | - | - | - | 0.965 | Mlig455_065153 {REF} {Length: 1988} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=31.5]; Inhibitor of Apoptosis domain [PF00653.23, score=20.9]} {RNA1509_9484} {RNA1310_26484} {RNA815_44809} | |
| 5. | MligTC455_15809 | 227 | 4.73 | Mlig455_069533 | Neo: Germline Age: - Region-enriched R4: 2.599/0.00358 |
TMEM43 | 0.965 | - | - | - | - | 0.965 | - | Mlig455_069533 {REF} {Length: 2373} {TRANSSPLICED} {Pfam: Transmembrane protein 43 [PF07787.14, score=152.3]} {Human: ENSG00000170876, TMEM43, transmembrane protein 43, [RH, Score=163, Expect=2e-45]} {Mouse: ENSMUSG00000030095, Tmem43, transmembrane protein 43, [RH, Score=150, Expect=9e-41]} {Dmel: FBgn0035825, CG8111, [RH, Score=153, Expect=3e-42]} {RNA1509_36829} {RNA1310_19296.1, RNA1509_36829} {RNA1509_36829, RNA815_15316} |
| 6. | MligTC455_52326 | 1067 | 22.23 | Mlig455_034323, Mlig455_034379, Mlig455_043870 | Neo: - Age: - Region-enriched R3: 1.200/0.00181 |
0.965 | - | - | - | - | - | 0.965 | Mlig455_034323 {REF} {Length: 385} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_48035} {RNA1310_44138} {RNA815_31469} Mlig455_034379 {REF} {Length: 409} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_38078, RNA1509_48035} {RNA1310_44138, RNA1509_38078, RNA1509_48035} {RNA1509_38078, RNA1509_48035, RNA815_31469} Mlig455_043870 {REF} {Length: 403} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_38078} {RNA1310_44138} {RNA815_31469} |
|
| 7. | MligTC455_19365 | 368 | 7.66 | Mlig455_033543 | Neo: - Age: Up-Up-Down |
LMX1A | 0.963 | - | - | - | - | 0.963 | - | Mlig455_033543 {REF} {Length: 3159} {Pfam: LIM domain [PF00412.24, score=80.9]; Homeodomain [PF00046.31, score=23.3]} {Human: ENSG00000162761, LMX1A, LIM homeobox transcription factor 1 alpha, [Score=145, Expect=6e-40]; ENSG00000136944, LMX1B, LIM homeobox transcription factor 1 beta, [Score=145, Expect=3e-40]} {Mouse: ENSMUSG00000038765, Lmx1b, LIM homeobox transcription factor 1 beta, [Score=145, Expect=2e-40]; ENSMUSG00000026686, Lmx1a, LIM homeobox transcription factor 1 alpha, [Score=141, Expect=6e-39]} {Dmel: FBgn0052105, Lmx1a, LIM homeobox transcription factor 1 alpha, [Score=148, Expect=5e-40]} {Celegans: WBGene00002988, lim-6, LIM domain family, [Score=112, Expect=1e-28]} {Smed: dd_Smed_v6_8252_0_1, dd_Smed_v6_8252_0_1, [Score=99.0, Expect=1e-23]} {RNA1509_28203} {RNA1310_17583.1} {RNA815_17757} |
| 8. | MligTC455_41489 | 218 | 4.55 | Mlig455_063751 | Neo: - Age: - |
SLC18A3 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_063751 {REF} {Length: 1991} {Pfam: Major Facilitator Superfamily [PF07690.18, score=95.8]; MFS_1 like family [PF12832.9, score=26.3]} {Human: ENSG00000187714, SLC18A3, solute carrier family 18 member A3, [Score=103, Expect=5e-23]; ENSG00000036565, SLC18A1, solute carrier family 18 member A1, [Score=99.4, Expect=1e-21]} {Mouse: ENSMUSG00000100241, Slc18a3, solute carrier family 18 (vesicular monoamine), member 3, [Score=107, Expect=3e-24]} {Dmel: FBgn0270928, VAChT, Vesicular acetylcholine transporter, [Score=199, Expect=1e-56]} {Celegans: WBGene00006756, unc-17, Vesicular acetylcholine transporter unc-17, [Score=182, Expect=3e-51]} {Smed: dd_Smed_v6_11630_0_1, dd_Smed_v6_11630_0_1, [Score=187, Expect=4e-53]} {RNA1509_37669} {RNA1310_14899.1, RNA1509_37669} {RNA1509_37669, RNA815_15265} |
Berezikov Lab - 2020-2021 © ERIBA