Data search


search
Exact
Search

Results for MligTC455_19426

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_19426 45 0.94 Mlig455_055478

Neo: -

Age: -

Mlig455_055478 {REF} {Length: 2102} {NoTransDecoderORF} {RNA1509_60145} {RNA1310_87383} {RNA815_53511}

Cumulative graph for MligTC455_19426

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.79 1.115 1.00000 1.00000
RegionR2 1.264 1.115 0.99983 1.00000
RegionR3 0.059 1.115 0.99982 1.00000
RegionR4 -1.599 1.115 0.99978 1.00000
RegionR5 -0.654 1.115 0.99991 1.00000
RegionR6 -0.183 1.115 0.99983 1.00000
RegionR7 0.703 1.115 1.00000 1.00000
RegionR8 1.2 1.115 0.99986 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.353 1.115 1.00000 1.00000
RegenerationR2 4.105 1.115 0.13931 0.56860
RegenerationR3 3.763 1.115 0.28086 0.71319
RegenerationR4 4.393 1.115 0.22616 0.67460
RegenerationR5 3.218 1.115 0.22552 0.65959
RegenerationR6 4.823 1.115 0.18927 0.52681
RegenerationBL 2.996 1.115 0.32854 0.69467
RegenerationTP 4.303 1.115 0.28404 0.73106


Genes with expression patterns similar to MligTC455_19426

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_19426 45 0.94 Mlig455_055478

Neo: -

Age: -

3 - - - 1.000 1.000 1.000 Mlig455_055478 {REF} {Length: 2102} {NoTransDecoderORF} {RNA1509_60145} {RNA1310_87383} {RNA815_53511}
2. MligTC455_25259 108 2.26 Mlig455_016987

Neo: -

Age: -

TMEM30B 1.682 - - - 0.721 - 0.961 Mlig455_016987 {REF} {Length: 2255} {TRANSSPLICED} {Pfam: LEM3 (ligand-effect modulator 3) family / CDC50 family [PF03381.17, score=285.6]} {Human: ENSG00000182107, TMEM30B, transmembrane protein 30B, [RH, Score=261, Expect=4e-83]} {Mouse: ENSMUSG00000034435, Tmem30b, transmembrane protein 30B, [RH, Score=253, Expect=2e-80]; ENSMUSG00000032328, Tmem30a, transmembrane protein 30A, [RH, Score=242, Expect=7e-76]} {Dmel: FBgn0030752, CG9947, [RH, Score=307, Expect=2e-101]} {Celegans: WBGene00019946, chat-1, CDC50 family protein chat-1, [RH, Score=287, Expect=9e-94]} {Smed: dd_Smed_v6_6430_0_1, dd_Smed_v6_6430_0_1, [Score=293, Expect=2e-96]} {RNA1509_30971} {RNA1310_19947, RNA1509_30971} {RNA1509_30971, RNA815_8261.1}
3. MligTC455_51613 49 1.03 Mlig455_036759

Neo: -

Age: -

0.982 - - - - 0.982 - Mlig455_036759 {REF} {Length: 427} {NoTransDecoderORF} {RNA1509_45539} {RNA1310_120300.2} {RNA815_29511.1}
4. MligTC455_09141 234 4.87 Mlig455_012120

Neo: -

Age: -

0.972 - - - - 0.972 - Mlig455_012120 {REF} {Length: 1545} {RNA1310_55515} {RNA815_30023}
5. MligTC455_30074 224 4.67 Mlig455_010726

Neo: Int S/G2/M

Age: -

MCM6 0.969 - - - - 0.969 - Mlig455_010726 {REF} {Length: 5430} {Pfam: MCM P-loop domain [PF00493.25, score=325.2]; MCM OB domain [PF17207.5, score=124.3]; MCM6 C-terminal winged-helix domain [PF18263.3, score=96.2]; MCM AAA-lid domain [PF17855.3, score=87.7]; MCM N-terminal domain [PF14551.8, score=60.7]; Magnesium chelatase, subunit ChlI [PF01078.23, score=31.9]; ATPase family associated with various cellular activities (AAA) [PF07726.13, score=25.0]; AAA domain (dynein-related subfamily) [PF07728.16, score=20.5]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=19.4]; Sigma-54 interaction domain [PF00158.28, score=18.9]} {Human: ENSG00000076003, MCM6, minichromosome maintenance complex component 6, [RH, Score=879, Expect=0.0]} {Mouse: ENSMUSG00000026355, Mcm6, minichromosome maintenance complex component 6, [RH, Score=868, Expect=0.0]} {Dmel: FBgn0025815, Mcm6, Minichromosome maintenance 6, [RH, Score=852, Expect=0.0]} {Celegans: WBGene00003158, mcm-6, DNA replication licensing factor mcm-6, [RH, Score=747, Expect=0.0]} {Smed: dd_Smed_v6_2682_0_1, dd_Smed_v6_2682_0_1, [RH, Score=769, Expect=0.0]} {RNA1509_4924} {RNA1310_1781.1} {RNA815_909}
6. MligTC455_49994 56 1.18 Mlig455_064693

Neo: -

Age: -

0.965 - - - - 0.965 - Mlig455_064693 {REF} {Length: 969} {NoTransDecoderORF} {RNA1310_116104}
7. MligTC455_06646 23 0.47 Mlig455_052044

Neo: -

Age: -

0.959 - - - - 0.959 - Mlig455_052044 {REF} {Length: 737}
8. MligTC455_42524 865 18.03 Mlig455_001409, Mlig455_064268

Neo: -

Age: -

0.959 - - - - 0.959 -

Mlig455_001409 {REF} {Length: 977} {Smed: dd_Smed_v6_391_0_1, dd_Smed_v6_391_0_1, [RH, Score=76.6, Expect=3e-20]} {RNA1509_31794} {RNA1310_45655, RNA1509_31794} {RNA1509_31794, RNA815_25121.1}

Mlig455_064268 {REF} {Length: 1019} {Smed: dd_Smed_v6_391_0_1, dd_Smed_v6_391_0_1, [RH, Score=76.6, Expect=3e-20]} {RNA1509_31794} {RNA1310_45655} {RNA815_25121.1}
9. MligTC455_45303 152 3.16 Mlig455_041340

Neo: -

Age: Down-Up-Down

ZDHHC14 0.959 - - - - 0.959 - Mlig455_041340 {REF} {Length: 2702} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=139.7]} {Human: ENSG00000175048, ZDHHC14, zinc finger DHHC-type containing 14, [Score=308, Expect=1e-100]; ENSG00000188706, ZDHHC9, zinc finger DHHC-type containing 9, [Score=308, Expect=8e-102]} {Mouse: ENSMUSG00000036985, Zdhhc9, zinc finger, DHHC domain containing 9, [Score=309, Expect=2e-102]; ENSMUSG00000034265, Zdhhc14, zinc finger, DHHC domain containing 14, [Score=303, Expect=1e-98]} {Dmel: FBgn0260941, app, approximated, [Score=289, Expect=2e-94]} {Celegans: WBGene00012948, dhhc-2, Palmitoyltransferase, [RH, Score=220, Expect=1e-67]} {Smed: dd_Smed_v6_9975_0_1, dd_Smed_v6_9975_0_1, [RH, Score=294, Expect=2e-96]} {RNA1509_25723, RNA1509_35241} {RNA1310_8511.2, RNA1509_25723, RNA1509_35241} {RNA1509_25723, RNA1509_35241, RNA815_8570}
10. MligTC455_39067 1049 21.85 Mlig455_015577

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.515

GSTP1 0.958 - - - - 0.958 - Mlig455_015577 {REF} {Length: 1133} {TRANSSPLICED} {Pfam: Glutathione S-transferase, C-terminal domain [PF14497.8, score=55.5]; Glutathione S-transferase, C-terminal domain [PF00043.27, score=34.0]; Glutathione S-transferase, N-terminal domain [PF13417.8, score=26.7]; Glutathione S-transferase, N-terminal domain [PF02798.22, score=26.1]; Glutathione S-transferase N-terminal domain [PF17172.6, score=20.4]; Glutathione S-transferase, N-terminal domain [PF13409.8, score=20.2]} {Human: ENSG00000084207, GSTP1, glutathione S-transferase pi 1, [Score=137, Expect=3e-40]} {Mouse: ENSMUSG00000060803, Gstp1, glutathione S-transferase, pi 1, [Score=142, Expect=2e-42]; ENSMUSG00000097830, Gstp1, glutathione S-transferase, pi 1, [Score=142, Expect=2e-42]; ENSMUSG00000038155, Gstp2, glutathione S-transferase, pi 2, [Score=140, Expect=3e-41]; ENSMUSG00000097808, Gstp2, glutathione S-transferase, pi 2, [Score=140, Expect=3e-41]} {Dmel: FBgn0010226, GstS1, Glutathione S transferase S1, [RH, Score=101, Expect=5e-26]} {Celegans: WBGene00001749, gst-1, Glutathione S-transferase P, [RH, Score=145, Expect=1e-43]} {Smed: dd_Smed_v6_20_0_1, dd_Smed_v6_20_0_1, [Score=93.2, Expect=1e-23]} {RNA1509_48479, RNA1509_6171} {RNA1310_28502.1, RNA1509_48479} {RNA1509_48479, RNA815_13314}
11. MligTC455_25791 6624 137.99 Mlig455_026535, Mlig455_036977, Mlig455_037651, Mlig455_044767, Mlig455_048877, Mlig455_048885, Mlig455_049562, Mlig455_053664, Mlig455_071136

Neo: -

Age: -

NYNRIN 0.957 - - - - 0.957 -

Mlig455_026535 {REF} {Length: 632} {RNA1509_22707} {RNA1310_30534} {RNA815_24119.1}

Mlig455_036977 {REF} {Length: 962} {NoTransDecoderORF} {RNA1509_22707} {RNA1310_61401.1} {RNA815_24119.1}

Mlig455_037651 {REF} {Length: 4197} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=109.5]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=101.1]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=84.7]; Integrase zinc binding domain [PF17921.3, score=60.4]; Integrase core domain [PF00665.28, score=54.2]; gag-polyprotein putative aspartyl protease [PF13975.8, score=25.5]; H2C2 zinc finger [PF09337.12, score=23.0]; Retroviral aspartyl protease [PF00077.22, score=21.5]; Aspartyl protease [PF13650.8, score=20.9]; Integrase core domain [PF13683.8, score=20.6]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=75.9, Expect=5e-13]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=84.3, Expect=7e-16]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=327, Expect=9e-95]} {RNA1509_41126} {RNA1310_3178} {RNA815_4850.1}

Mlig455_044767 {REF} {Length: 995} {RNA1509_22707} {RNA1310_30534} {RNA815_24119.1}

Mlig455_048877 {REF} {Length: 847} {NoTransDecoderORF} {RNA1509_56606} {RNA1310_61500} {RNA815_24119.2}

Mlig455_048885 {REF} {Length: 1005} {RNA1509_56606} {RNA1310_33252.1} {RNA815_24119.1}

Mlig455_049562 {REF} {Length: 1289} {NoTransDecoderORF} {RNA1509_22707} {RNA1310_61500} {RNA815_24119.1}

Mlig455_053664 {REF} {Length: 994} {RNA1509_22707} {RNA1310_30534} {RNA815_24119.1}

Mlig455_071136 {REF} {Length: 1286} {RNA1509_22707} {RNA1310_61500} {RNA815_24119.1}
12. MligTC455_26433 15 0.31 Mlig455_013559

Neo: -

Age: -

0.956 - - - - 0.956 - Mlig455_013559 {REF} {Length: 1067} {NoTransDecoderORF} {RNA1509_38155} {RNA1310_16376} {RNA815_12881}
13. MligTC455_25790 799 16.65 Mlig455_060350

Neo: -

Age: Down-Up-Down

Region-enriched R7: 2.014/0.02263

0.954 - - - - 0.954 - Mlig455_060350 {REF} {Length: 1236} {NoTransDecoderORF} {RNA1509_22707} {RNA1310_30534} {RNA815_24119.1}
14. MligTC455_49843 70 1.46 Mlig455_058264, Mlig455_058281, Mlig455_070786

Neo: -

Age: -

CHRNA3, CHRNA7 0.954 - - - - - 0.954

Mlig455_058264 {REF} {Length: 2377} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=149.4]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=103.7]} {Human: ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=224, Expect=4e-66]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=222, Expect=2e-65]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=222, Expect=2e-65]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=222, Expect=2e-65]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=216, Expect=2e-63]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=223, Expect=8e-66]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=220, Expect=8e-65]; ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=219, Expect=6e-65]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=213, Expect=4e-62]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [Score=240, Expect=3e-72]} {Celegans: WBGene00000060, acr-21, AcetylCholine Receptor, [Score=229, Expect=7e-69]} {Smed: dd_Smed_v6_31300_0_1, dd_Smed_v6_31300_0_1, [Score=227, Expect=1e-67]} {RNA1310_31785} {RNA815_40862}

Mlig455_058281 {REF} {Length: 2912} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=179.9]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=105.5]} {Human: ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=239, Expect=1e-71]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=239, Expect=1e-71]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=238, Expect=4e-71]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=236, Expect=1e-70]; ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=231, Expect=2e-69]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=229, Expect=4e-68]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=240, Expect=3e-72]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=232, Expect=3e-69]; ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=231, Expect=7e-69]; ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=228, Expect=3e-68]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [Score=252, Expect=2e-76]} {Celegans: WBGene00000060, acr-21, AcetylCholine Receptor, [Score=250, Expect=1e-76]} {Smed: dd_Smed_v6_8058_0_1, dd_Smed_v6_8058_0_1, [Score=239, Expect=7e-72]} {RNA1310_31785} {RNA815_40862}

Mlig455_070786 {REF} {Length: 1486} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=36.1]} {RNA1310_31785} {RNA815_43410}
15. MligTC455_23945 817 17.03 Mlig455_014012

Neo: -

Age: -

Region-enriched R7: 2.794/0.00000
Region-enriched R8: 2.445/0.00002

Regeneration-downregulated BL: -3.790

Regeneration-depleted BL: -3.790

0.953 - - - - 0.953 - Mlig455_014012 {REF} {Length: 906} {TRANSSPLICED} {RNA1509_17939} {RNA1310_33876} {RNA815_9418.2}
16. MligTC455_28597 66 1.38 Mlig455_057513, Mlig999027.g1

Neo: -

Age: -

FGA 0.953 - - - - - 0.953

Mlig455_057513 {REF} {Length: 2416} {tRNA: Met(CAT),pseudo, score=21.1} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=40.9]} {Human: ENSG00000171560, FGA, fibrinogen alpha chain, [Score=56.2, Expect=4e-09]} {Mouse: ENSMUSG00000028001, Fga, fibrinogen alpha chain, [Score=52.4, Expect=6e-08]; ENSMUSG00000039899, Fgl2, fibrinogen-like protein 2, [Score=51.6, Expect=9e-08]; ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=51.2, Expect=1e-07]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=50.1, Expect=3e-07]} {Dmel: FBgn0033312, CG8642, [Score=46.6, Expect=3e-06]} {Smed: dd_Smed_v6_74244_0_1, dd_Smed_v6_74244_0_1, [Score=45.1, Expect=1e-06]} {RNA1509_56255} {RNA1310_14959.1} {RNA815_9852.1}

17. MligTC455_04208 20 0.42 Mlig455_069221

Neo: Germline

Age: -

0.952 - - - - 0.952 - Mlig455_069221 {REF} {Length: 1971} {RNA1310_69436}
18. MligTC455_27579 25 0.52 Mlig455_006425

Neo: -

Age: Down-Down-Up

Region-enriched R5: 3.372/0.04691

NOTCH1 0.952 - - - - - 0.952 Mlig455_006425 {REF} {Length: 5154} {TRANSSPLICED} {Pfam: EGF-like domain [PF00008.29, score=244.5]; Human growth factor-like EGF [PF12661.9, score=124.2]; Laminin G domain [PF02210.26, score=32.4]; EGF-like domain [PF07974.15, score=19.0]} {Human: ENSG00000148400, NOTCH1, notch 1, [Score=422, Expect=2e-121]; ENSG00000134250, NOTCH2, notch 2, [Score=418, Expect=3e-120]} {Mouse: ENSMUSG00000026923, Notch1, notch 1, [Score=427, Expect=4e-123]; ENSMUSG00000027878, Notch2, notch 2, [Score=406, Expect=2e-116]} {Dmel: FBgn0259685, crb, crumbs, [Score=491, Expect=3e-145]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=273, Expect=1e-73]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=303, Expect=2e-83]} {RNA1509_32484} {RNA1310_6715.1, RNA1509_32484} {RNA1509_32484, RNA815_693.1}
19. MligTC455_07534 19 0.39 Mlig455_064907

Neo: -

Age: -

0.951 - - - - 0.951 - Mlig455_064907 {REF} {Length: 220} {NoTransDecoderORF}
20. MligTC455_35552 32 0.67 Mlig455_035296

Neo: -

Age: -

SCNN1B 0.951 - - - - 0.951 - Mlig455_035296 {REF} {Length: 3475} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=192.5]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=64.7, Expect=5e-10]} {Mouse: ENSMUSG00000030873, Scnn1b, sodium channel, nonvoltage-gated 1 beta, [Score=57.8, Expect=4e-08]} {Celegans: WBGene00006832, unc-105, Degenerin-like protein unc-105, [Score=77.0, Expect=2e-14]} {Smed: dd_Smed_v6_22997_0_1, dd_Smed_v6_22997_0_1, [Score=357, Expect=9e-114]} {RNA1509_53211} {RNA1310_6642.3, RNA1509_53211} {RNA1509_53211, RNA815_12322}
21. MligTC455_49640 1122 23.38 Mlig455_063691

Neo: -

Age: logFC(26M/2M)=-0.370

Region-enriched R7: 2.861/0.00000
Region-enriched R6: 1.635/0.02487

Regeneration-downregulated BL: -2.323

Regeneration-depleted BL: -2.323

0.951 - - - - 0.951 - Mlig455_063691 {REF} {Length: 922} {RNA1509_5516} {RNA1310_77638} {RNA815_34597}
22. MligTC455_31185 18 0.37 Mlig455_044975

Neo: -

Age: -

0.95 - - - - 0.950 - Mlig455_044975 {REF} {Length: 682} {RNA1509_38155} {RNA1310_23095} {RNA815_12881}
23. MligTC455_42877 141 2.93 Mlig455_058822

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.267

0.95 - - - - 0.950 - Mlig455_058822 {REF} {Length: 1815} {TRANSSPLICED} {Mouse: ENSMUSG00000027424, Mgme1, mitochondrial genome maintenance exonuclease 1, [RH, Score=119, Expect=1e-30]} {Celegans: WBGene00077500, C27H6.9, Mitochondrial genome maintenance exonuclease 1, [RH, Score=64.3, Expect=1e-11]} {Smed: dd_Smed_v6_14245_0_2, dd_Smed_v6_14245_0_2, [RH, Score=112, Expect=2e-29]} {RNA1509_18510} {RNA1310_22411} {RNA815_25218}
24. MligTC455_47747 1085 22.6 Mlig455_018594

Neo: -

Age: -

Region-enriched R5: 1.797/0.00282

TMEM243 0.95 - - - - 0.950 - Mlig455_018594 {REF} {Length: 1402} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF2678) [PF10856.10, score=135.3]} {Human: ENSG00000135185, TMEM243, transmembrane protein 243, [RH, Score=125, Expect=3e-38]} {Mouse: ENSMUSG00000079659, Tmem243, transmembrane protein 243, mitochondrial, [RH, Score=111, Expect=9e-33]} {RNA1509_19411, RNA1509_28627, RNA1509_52894, RNA1509_55931, RNA1509_57400} {RNA1310_25206.1, RNA1509_19411, RNA1509_28627, RNA1509_52894, RNA1509_55931, RNA1509_57400} {RNA1509_19411, RNA1509_28627, RNA1509_52894, RNA1509_55931, RNA1509_57400, RNA815_6775.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA