Data search
Results for MligTC455_42877
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_42877 | 141 | 2.93 | Mlig455_058822 | Neo: - |
Mlig455_058822 {REF} {Length: 1815} {TRANSSPLICED} {Mouse: ENSMUSG00000027424, Mgme1, mitochondrial genome maintenance exonuclease 1, [RH, Score=119, Expect=1e-30]} {Celegans: WBGene00077500, C27H6.9, Mitochondrial genome maintenance exonuclease 1, [RH, Score=64.3, Expect=1e-11]} {Smed: dd_Smed_v6_14245_0_2, dd_Smed_v6_14245_0_2, [RH, Score=112, Expect=2e-29]} {RNA1509_18510} {RNA1310_22411} {RNA815_25218} |
Cumulative graph for MligTC455_42877
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.754 | 2 | 0.62621 | 1.00000 | |
| RegionR2 | 1.048 | 2 | 0.16706 | 0.51173 | |
| RegionR3 | 0.258 | 2 | 0.67458 | 1.00000 | |
| RegionR4 | -0.943 | 2 | 0.18754 | 0.46127 | |
| RegionR5 | -0.457 | 2 | 0.46138 | 0.82369 | |
| RegionR6 | 0.735 | 2 | 0.25489 | 0.83961 | |
| RegionR7 | -0.51 | 2 | 0.61948 | 1.00000 | |
| RegionR8 | -0.885 | 2 | 0.50853 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.839 | 2 | 0.23889 | 0.96582 | |
| RegenerationR2 | -2.142 | 2 | 0.00601 | 0.12439 | |
| RegenerationR3 | 0.318 | 2 | 0.65507 | 0.93120 | |
| RegenerationR4 | 1.093 | 2 | 0.12468 | 0.53706 | |
| RegenerationR5 | -0.392 | 2 | 0.58124 | 0.90094 | |
| RegenerationR6 | -1.135 | 2 | 0.16787 | 0.49832 | |
| RegenerationBL | -1.1 | 2 | 0.43478 | 0.80305 | |
| RegenerationTP | 2.013 | 2 | 0.04540 | 0.35345 |
Genes with expression patterns similar to MligTC455_42877
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_42877 | 141 | 2.93 | Mlig455_058822 | Neo: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_058822 {REF} {Length: 1815} {TRANSSPLICED} {Mouse: ENSMUSG00000027424, Mgme1, mitochondrial genome maintenance exonuclease 1, [RH, Score=119, Expect=1e-30]} {Celegans: WBGene00077500, C27H6.9, Mitochondrial genome maintenance exonuclease 1, [RH, Score=64.3, Expect=1e-11]} {Smed: dd_Smed_v6_14245_0_2, dd_Smed_v6_14245_0_2, [RH, Score=112, Expect=2e-29]} {RNA1509_18510} {RNA1310_22411} {RNA815_25218} | |
| 2. | MligTC455_25181 | 2947 | 61.4 | Mlig455_016583, Mlig455_016639, Mlig455_035594, Mlig455_035605, Mlig455_051883 | Neo: - Age: logFC(26M/2M)=-0.369 Region-enriched R7: 3.379/0.00000 Regeneration-downregulated BL: -3.511 Regeneration-depleted BL: -3.511 |
1.663 | - | - | - | - | 0.957 | 0.706 | Mlig455_016583 {REF} {Length: 2083} {Pfam: Calcium-activated potassium channel, beta subunit [PF03185.17, score=45.3]} {Smed: dd_Smed_v6_12880_0_1, dd_Smed_v6_12880_0_1, [Score=82.4, Expect=1e-18]} {RNA1509_22294} {RNA1310_28969} {RNA815_14223} Mlig455_016639 {REF} {Length: 2081} {Pfam: Calcium-activated potassium channel, beta subunit [PF03185.17, score=20.8]} {Smed: dd_Smed_v6_12880_0_1, dd_Smed_v6_12880_0_1, [Score=63.5, Expect=2e-12]} {RNA1509_22294} {RNA1310_28969} {RNA815_14223} Mlig455_035594 {REF} {Length: 986} {Pfam: Calcium-activated potassium channel, beta subunit [PF03185.17, score=46.3]} {Smed: dd_Smed_v6_12880_0_1, dd_Smed_v6_12880_0_1, [Score=82.8, Expect=3e-19]} {RNA1509_50243} {RNA1310_28969} {RNA815_14223} Mlig455_035605 {REF} {Length: 2250} {Pfam: Calcium-activated potassium channel, beta subunit [PF03185.17, score=46.3]} {Smed: dd_Smed_v6_12880_0_1, dd_Smed_v6_12880_0_1, [Score=82.0, Expect=6e-19]} {RNA1509_58072} {RNA1310_28969} {RNA815_14223} Mlig455_051883 {REF} {Length: 914} {Pfam: Calcium-activated potassium channel, beta subunit [PF03185.17, score=45.3]} {Smed: dd_Smed_v6_12880_0_1, dd_Smed_v6_12880_0_1, [Score=82.4, Expect=1e-18]} {RNA1509_50243} {RNA1310_28969} {RNA815_14223} |
|
| 3. | MligTC455_23982 | 211 | 4.39 | Mlig455_048625, Mlig455_048745 | Neo: - Age: - Region-enriched R4: 2.863/0.03045 |
0.976 | - | - | 0.976 | - | - | - | Mlig455_048625 {REF} {Length: 2567} {TRANSSPLICED} {Pfam: Las1-like [PF04031.15, score=76.7]} {RNA1310_15916} {RNA815_6066} Mlig455_048745 {REF} {Length: 2352} {TRANSSPLICED} {Pfam: Las1-like [PF04031.15, score=76.8]} {RNA1310_15916} {RNA815_6066} |
|
| 4. | MligTC455_32238 | 24 | 0.49 | Mlig455_036518 | Neo: - Age: - |
0.971 | - | - | - | - | 0.971 | - | Mlig455_036518 {REF} {Length: 3936} {NoTransDecoderORF} {RNA1509_32306} {RNA1310_31813} {RNA815_49217.1} | |
| 5. | MligTC455_20717 | 964 | 20.08 | Mlig455_010303, Mlig455_010334 | Neo: - Age: - Region-enriched R6: 8.114/0.00000 Regeneration-upregulated TP: 8.019 Regeneration-enriched TP: 8.019 |
0.97 | - | - | - | - | 0.970 | - | Mlig455_010303 {REF} {Length: 1139} {TRANSSPLICED} {Mouse: ENSMUSG00000044581, 4932415D10Rik, RIKEN cDNA 4932415D10 gene, [Score=45.8, Expect=7e-06]} {RNA1509_30258} {RNA1310_41086.1} {RNA815_30011} Mlig455_010334 {REF} {Length: 2409} {Mouse: ENSMUSG00000044581, 4932415D10Rik, RIKEN cDNA 4932415D10 gene, [Score=45.8, Expect=7e-06]} {RNA1509_54865} {RNA1310_41086.1} {RNA815_30011} |
|
| 6. | MligTC455_38814 | 7 | 0.14 | Mlig455_008986 | Neo: - Age: Up-Down-Up |
THSD7B | 0.97 | - | - | - | - | 0.970 | - | Mlig455_008986 {REF} {Length: 8491} {Pfam: Spondin-like TSP1 domain [PF19028.2, score=68.9]; Thrombospondin type 1 domain [PF19030.2, score=36.2]} {Human: ENSG00000144229, THSD7B, thrombospondin type 1 domain containing 7B, [Score=143, Expect=3e-34]} {Mouse: ENSMUSG00000042581, Thsd7b, thrombospondin, type I, domain containing 7B, [Score=149, Expect=2e-36]} {Smed: dd_Smed_v6_1161_0_1, dd_Smed_v6_1161_0_1, [Score=50.8, Expect=3e-06]} {RNA1310_90350} |
| 7. | MligTC455_53323 | 292 | 6.09 | Mlig455_022584 | Neo: - Age: Up-Down-Down |
0.967 | - | 0.967 | - | - | - | - | Mlig455_022584 {REF} {Length: 4306} {TRANSSPLICED} {RNA1509_55405, RNA1509_56628} {RNA1310_11791.1, RNA1509_56628} {RNA1509_56628, RNA815_14672} | |
| 8. | MligTC455_22001 | 38 | 0.78 | Mlig455_070600 | Neo: - Age: - |
0.961 | - | - | - | - | 0.961 | - | Mlig455_070600 {REF} {Length: 390} {NoTransDecoderORF} {RNA1509_20978} {RNA1310_12978} {RNA815_21321.1} | |
| 9. | MligTC455_35552 | 32 | 0.67 | Mlig455_035296 | Neo: - Age: - |
SCNN1B | 0.96 | - | - | - | - | 0.960 | - | Mlig455_035296 {REF} {Length: 3475} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=192.5]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=64.7, Expect=5e-10]} {Mouse: ENSMUSG00000030873, Scnn1b, sodium channel, nonvoltage-gated 1 beta, [Score=57.8, Expect=4e-08]} {Celegans: WBGene00006832, unc-105, Degenerin-like protein unc-105, [Score=77.0, Expect=2e-14]} {Smed: dd_Smed_v6_22997_0_1, dd_Smed_v6_22997_0_1, [Score=357, Expect=9e-114]} {RNA1509_53211} {RNA1310_6642.3, RNA1509_53211} {RNA1509_53211, RNA815_12322} |
| 10. | MligTC455_52962 | 100 | 2.08 | Mlig455_018565 | Neo: - Age: Up-Down-Down Region-enriched R2: 4.692/0.01678 |
ZC3H3 | 0.96 | - | - | - | 0.960 | - | - | Mlig455_018565 {REF} {Length: 2655} {TRANSSPLICED} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=24.1]} {Human: ENSG00000014164, ZC3H3, zinc finger CCCH-type containing 3, [RH, Score=96.7, Expect=4e-21]} {Mouse: ENSMUSG00000075600, Zc3h3, zinc finger CCCH type containing 3, [RH, Score=99.4, Expect=4e-22]} {Dmel: FBgn0035900, ZC3H3, [RH, Score=67.4, Expect=6e-12]} {RNA1509_34328, RNA1509_9607} {RNA1310_10963.1, RNA1509_34328, RNA1509_9607} {RNA1509_34328, RNA1509_9607, RNA815_18673} |
| 11. | MligTC455_45303 | 152 | 3.16 | Mlig455_041340 | Neo: - Age: Down-Up-Down |
ZDHHC14 | 0.951 | - | - | - | - | 0.951 | - | Mlig455_041340 {REF} {Length: 2702} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=139.7]} {Human: ENSG00000175048, ZDHHC14, zinc finger DHHC-type containing 14, [Score=308, Expect=1e-100]; ENSG00000188706, ZDHHC9, zinc finger DHHC-type containing 9, [Score=308, Expect=8e-102]} {Mouse: ENSMUSG00000036985, Zdhhc9, zinc finger, DHHC domain containing 9, [Score=309, Expect=2e-102]; ENSMUSG00000034265, Zdhhc14, zinc finger, DHHC domain containing 14, [Score=303, Expect=1e-98]} {Dmel: FBgn0260941, app, approximated, [Score=289, Expect=2e-94]} {Celegans: WBGene00012948, dhhc-2, Palmitoyltransferase, [RH, Score=220, Expect=1e-67]} {Smed: dd_Smed_v6_9975_0_1, dd_Smed_v6_9975_0_1, [RH, Score=294, Expect=2e-96]} {RNA1509_25723, RNA1509_35241} {RNA1310_8511.2, RNA1509_25723, RNA1509_35241} {RNA1509_25723, RNA1509_35241, RNA815_8570} |
| 12. | MligTC455_47343 | 260 | 5.41 | Mlig455_044292 | Neo: - Age: - Region-enriched R5: 1.183/0.04891 |
SMN1 | 0.951 | - | - | 0.951 | - | - | - | Mlig455_044292 {REF} {Length: 1672} {TRANSSPLICED} {Pfam: Survival motor neuron protein (SMN) [PF06003.14, score=121.6]; Tudor domain [PF00567.26, score=36.8]} {Human: ENSG00000172062, SMN1, survival of motor neuron 1, telomeric, [RH, Score=96.7, Expect=9e-24]; ENSG00000275349, SMN1, survival of motor neuron 1, telomeric, [RH, Score=96.7, Expect=9e-24]; ENSG00000277773, SMN2, survival of motor neuron 2, centromeric, [RH, Score=96.7, Expect=9e-24]; ENSG00000205571, SMN2, survival of motor neuron 2, centromeric, [RH, Score=96.7, Expect=9e-24]; ENSG00000273772, SMN2, survival of motor neuron 2, centromeric, [RH, Score=96.7, Expect=9e-24]} {Mouse: ENSMUSG00000021645, Smn1, survival motor neuron 1, [RH, Score=87.8, Expect=2e-20]} {Dmel: FBgn0036641, Smn, survival motor neuron, [RH, Score=66.2, Expect=4e-13]} {Celegans: WBGene00004887, smn-1, SMN (Human Survival Motor Neuron gene) homolog; SMN protein, [RH, Score=62.8, Expect=5e-12]} {RNA1509_35742} {RNA1310_21564.1, RNA1509_35742} {RNA1509_35742, RNA815_23805} |
| 13. | MligTC455_09752 | 15 | 0.3 | Mlig455_006516 | Neo: - Age: - |
0.95 | - | - | - | - | 0.950 | - | Mlig455_006516 {REF} {Length: 635} {NoTransDecoderORF} | |
| 14. | MligTC455_19426 | 45 | 0.94 | Mlig455_055478 | Neo: - Age: - |
0.95 | - | - | - | - | 0.950 | - | Mlig455_055478 {REF} {Length: 2102} {NoTransDecoderORF} {RNA1509_60145} {RNA1310_87383} {RNA815_53511} |
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