Data search
Results for MligTC455_19683
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_19683 | 30 | 0.62 | Mlig455_009067 | Neo: - Age: Up-Down-Down |
Mlig455_009067 {REF} {Length: 1668} {RNA1509_57072} {RNA1310_25564} {RNA815_54244} |
Cumulative graph for MligTC455_19683
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -4.386 | 0.903 | 0.99889 | 1.00000 | |
| RegionR2 | 0.49 | 0.903 | 0.98222 | 1.00000 | |
| RegionR3 | 0.395 | 0.903 | 0.84681 | 1.00000 | |
| RegionR4 | 2.791 | 0.903 | 0.39616 | 0.72272 | |
| RegionR5 | 2.319 | 0.903 | 0.46466 | 0.82674 | |
| RegionR6 | -1.082 | 0.903 | 0.99165 | 1.00000 | |
| RegionR7 | 1.861 | 0.903 | 0.49790 | 1.00000 | |
| RegionR8 | -2.388 | 0.903 | 0.99924 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.547 | 0.903 | 0.99976 | 1.00000 | |
| RegenerationR2 | -3.923 | 0.903 | 0.24367 | 0.69157 | |
| RegenerationR3 | -5.133 | 0.903 | 0.06953 | 0.44227 | |
| RegenerationR4 | -3.273 | 0.903 | 0.30741 | 0.74836 | |
| RegenerationR5 | -5.203 | 0.903 | 0.06790 | 0.40988 | |
| RegenerationR6 | -3.504 | 0.903 | 0.22664 | 0.57184 | |
| RegenerationBL | -3.786 | 0.903 | 0.99886 | 1.00000 | |
| RegenerationTP | -3.926 | 0.903 | 0.99890 | 1.00000 |
Genes with expression patterns similar to MligTC455_19683
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_19683 | 30 | 0.62 | Mlig455_009067 | Neo: - Age: Up-Down-Down |
2 | - | - | 1.000 | 1.000 | - | - | Mlig455_009067 {REF} {Length: 1668} {RNA1509_57072} {RNA1310_25564} {RNA815_54244} | |
| 2. | MligTC455_20519 | 7 | 0.15 | Mlig455_028805 | Neo: - Age: - |
0.988 | - | - | - | 0.988 | - | - | Mlig455_028805 {REF} {Length: 911} {RNA1509_20946} {RNA1310_96877} {RNA815_50428} | |
| 3. | MligTC455_46358 | 94 | 1.95 | Mlig455_066966 | Neo: - |
0.987 | - | - | - | 0.987 | - | - | Mlig455_066966 {REF} {Length: 3174} {Pfam: Innexin [PF00876.20, score=311.0]} {Dmel: FBgn0027108, Inx2, Innexin 2, [Score=87.8, Expect=1e-18]} {Celegans: WBGene00006749, unc-9, Innexin unc-9, [Score=193, Expect=6e-57]} {Smed: dd_Smed_v6_8019_0_1, dd_Smed_v6_8019_0_1, [Score=255, Expect=7e-80]} {RNA1509_46847} {RNA1310_9874} {RNA815_3526} | |
| 4. | MligTC455_16690 | 514 | 10.7 | Mlig455_017270 | Neo: Irradiation Age: Up-Down-Down Region-specific R4: 4.702 Region-enriched R4: 2.803/0.00034 |
0.983 | - | - | - | 0.983 | - | - | Mlig455_017270 {REF} {Length: 3362} {RNA1509_12608, RNA1509_34589, RNA1509_59322} {RNA1310_20003, RNA1509_12608, RNA1509_34589, RNA1509_59322} {RNA1509_12608, RNA1509_34589, RNA1509_59322, RNA815_17868.1} | |
| 5. | MligTC455_03350 | 34 | 0.71 | Mlig455_016875 | Neo: - Age: - |
JMJD6 | 0.979 | - | - | - | 0.979 | - | - | Mlig455_016875 {REF} {Length: 1862} {Pfam: JmjC domain, hydroxylase [PF02373.24, score=80.0]; Cupin-like domain [PF13621.8, score=71.6]} {Human: ENSG00000070495, JMJD6, jumonji domain containing 6, arginine demethylase and lysine hydroxylase, [RH, Score=456, Expect=1e-159]} {Mouse: ENSMUSG00000056962, Jmjd6, jumonji domain containing 6, [RH, Score=450, Expect=2e-157]} {Dmel: FBgn0038948, PSR, phosphatidylserine receptor, [RH, Score=441, Expect=4e-154]} {Celegans: WBGene00004205, psr-1, Bifunctional arginine demethylase and lysyl-hydroxylase psr-1, [RH, Score=372, Expect=3e-127]} {Smed: dd_Smed_v6_5446_0_1, dd_Smed_v6_5446_0_1, [RH, Score=444, Expect=1e-155]} {RNA1509_11963} {RNA1310_22854, RNA1509_11963} {RNA1509_11963, RNA815_8433.1} |
| 6. | MligTC455_15609 | 40 | 0.83 | Mlig455_013993 | Neo: Irradiation Age: Up-Down-Down Region-enriched R2: 5.195/0.04952 |
0.979 | - | - | - | 0.979 | - | - | Mlig455_013993 {REF} {Length: 2157} {Pfam: WSC domain [PF01822.21, score=49.2]; PAN domain [PF00024.28, score=28.8]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=48.1, Expect=3e-06]} {RNA1509_45592} {RNA1310_32706.1} {RNA815_19388} | |
| 7. | MligTC455_35104 | 20 | 0.43 | Mlig455_065442 | Neo: - Age: - |
YKT6 | 0.97 | - | - | - | 0.970 | - | - | Mlig455_065442 {REF} {Length: 2294} {Pfam: Synaptobrevin [PF00957.23, score=53.9]; Regulated-SNARE-like domain [PF13774.8, score=47.4]} {Human: ENSG00000106636, YKT6, YKT6 v-SNARE homolog, [Score=197, Expect=3e-64]} {Mouse: ENSMUSG00000002741, Ykt6, YKT6 v-SNARE homolog (S. cerevisiae), [Score=197, Expect=3e-64]} {Dmel: FBgn0260858, Ykt6, YKT6 v-SNARE, [Score=192, Expect=2e-62]} {Celegans: WBGene00015164, ykt-6, YKT6 (Yeast v-SNARE) homolog, [RH, Score=183, Expect=9e-59]} {Smed: dd_Smed_v6_8028_0_1, dd_Smed_v6_8028_0_1, [Score=206, Expect=3e-68]} {RNA1310_36038} {RNA815_22722} |
| 8. | MligTC455_42100 | 2179 | 45.4 | Mlig455_004666, Mlig455_004731 | Neo: Germline Age: - Region-enriched R2: 4.874/0.00000 |
0.97 | - | - | - | 0.970 | - | - | Mlig455_004666 {REF} {Length: 1651} {Pfam: Family of unknown function (DUF5530) [PF17670.3, score=18.8]} {Mouse: ENSMUSG00000029661, Col1a2, collagen, type I, alpha 2, [Score=49.7, Expect=2e-06]} {RNA1509_45725} {RNA1310_23419.1} {RNA815_10199} Mlig455_004731 {REF} {Length: 2594} {RNA1509_29755} {RNA1310_23419.1} {RNA815_10199} |
|
| 9. | MligTC455_54176 | 621 | 12.93 | Mlig455_027812, Mlig455_060031 | Neo: Germline Age: Up-Down-Up, logFC(26M/2M)=0.510 Region-enriched R4: 3.051/0.01164 |
0.962 | - | - | - | 0.962 | - | - | Mlig455_027812 {REF} {Length: 489} {Pfam: Ubiquitin family [PF00240.25, score=22.7]} {RNA1509_13902} {RNA1310_80266, RNA1509_13902} {RNA1509_13902, RNA815_36228} Mlig455_060031 {REF} {Length: 473} {Pfam: Ubiquitin family [PF00240.25, score=22.7]} {RNA1509_13902} {RNA1310_80266} {RNA815_36228} |
|
| 10. | MligTC455_48159 | 100 | 2.07 | Mlig455_057372, Mlig455_057396, Mlig455_059563 | Neo: - Age: Down-Up-Up |
0.955 | - | - | - | 0.955 | - | - | Mlig455_057372 {REF} {Length: 1060} {Pfam: Concanavalin A-like lectin/glucanases superfamily [PF13385.8, score=25.8]} {RNA1310_31078} {RNA815_45415} Mlig455_057396 {REF} {Length: 1126} {RNA1310_31078} {RNA815_45415} Mlig455_059563 {REF} {Length: 920} {Pfam: Concanavalin A-like lectin/glucanases superfamily [PF13385.8, score=29.7]} {RNA1310_31078} {RNA815_45415} |
|
| 11. | MligTC455_15647 | 55 | 1.14 | Mlig455_030460 | Neo: - Age: - |
0.951 | - | - | - | 0.951 | - | - | Mlig455_030460 {REF} {Length: 3324} {Smed: dd_Smed_v6_12269_0_1, dd_Smed_v6_12269_0_1, [RH, Score=61.2, Expect=5e-10]} {RNA1509_50317} {RNA1310_26677} {RNA815_35533} | |
| 12. | MligTC455_16044 | 122 | 2.55 | Mlig455_053002 | Neo: Irradiation Age: - Region-enriched R4: 4.066/0.00030 |
0.95 | - | - | - | 0.950 | - | - | Mlig455_053002 {REF} {Length: 2511} {TRANSSPLICED} {RNA1509_32955} {RNA1310_8926.1} {RNA815_7573} |
Berezikov Lab - 2020-2021 © ERIBA