M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_48159

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_48159 100 2.07 Mlig455_057372, Mlig455_057396, Mlig455_059563

Neo: -

Age: Down-Up-Up

Mlig455_057372 {REF} {Length: 1060} {Pfam: Concanavalin A-like lectin/glucanases superfamily [PF13385.8, score=25.8]} {RNA1310_31078} {RNA815_45415}

Mlig455_057396 {REF} {Length: 1126} {RNA1310_31078} {RNA815_45415}

Mlig455_059563 {REF} {Length: 920} {Pfam: Concanavalin A-like lectin/glucanases superfamily [PF13385.8, score=29.7]} {RNA1310_31078} {RNA815_45415}

Cumulative graph for MligTC455_48159

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.934 2.196 1.00000 1.00000
RegionR2 -0.797 2.196 0.91437 1.00000
RegionR3 3.741 2.196 0.20436 0.74477
RegionR4 1.069 2.196 0.54666 0.86808
RegionR5 1.868 2.196 0.42508 0.78525
RegionR6 0.995 2.196 0.61546 1.00000
RegionR7 -2.983 2.196 0.99986 1.00000
RegionR8 -1.958 2.196 0.99991 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -2.198 2.196 0.99990 1.00000
RegenerationR2 2.798 2.196 0.30170 0.74335
RegenerationR3 -1.646 2.196 0.47771 0.84833
RegenerationR4 1.42 2.196 0.91442 1.00000
RegenerationR5 -1.565 2.196 0.51667 0.86775
RegenerationR6 -1.891 2.196 0.48357 0.79408
RegenerationBL -3.064 2.196 1.00000 1.00000
RegenerationTP 1.116 2.196 0.65904 0.99344


Genes with expression patterns similar to MligTC455_48159

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_48159 100 2.07 Mlig455_057372, Mlig455_057396, Mlig455_059563

Neo: -

Age: Down-Up-Up

 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_057372 {REF} {Length: 1060} {Pfam: Concanavalin A-like lectin/glucanases superfamily [PF13385.8, score=25.8]} {RNA1310_31078} {RNA815_45415}

Mlig455_057396 {REF} {Length: 1126} {RNA1310_31078} {RNA815_45415}

Mlig455_059563 {REF} {Length: 920} {Pfam: Concanavalin A-like lectin/glucanases superfamily [PF13385.8, score=29.7]} {RNA1310_31078} {RNA815_45415}
2. MligTC455_41764 28 0.58 Mlig455_067189

Neo: -

Age: -

 1.843 - - - 0.953 - 0.890 Mlig455_067189 {REF} {Length: 1210} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=53.7]} {Smed: dd_Smed_v6_21509_0_1, dd_Smed_v6_21509_0_1, [Score=51.2, Expect=4e-07]} {RNA1310_24513} {RNA815_25505}
3. MligTC455_46044 61 1.26 Mlig455_047114

Neo: -

Age: -

 1.78 - - - 0.803 - 0.977 Mlig455_047114 {REF} {Length: 1814} {Pfam: WSC domain [PF01822.21, score=46.9]; PAN domain [PF00024.28, score=20.6]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=46.2, Expect=1e-05]} {RNA1509_32911} {RNA1310_59750} {RNA815_37535}
4. MligTC455_48677 73 1.52 Mlig455_019293, Mlig455_019513, Mlig455_066921

Neo: -

Age: -

Region-enriched R4: 4.461/0.02473

 1.759 - - - - 0.805 0.954

Mlig455_019293 {REF} {Length: 953} {RNA1310_75755} {RNA815_39348}

Mlig455_019513 {REF} {Length: 1646} {RNA1509_18097} {RNA1310_23148} {RNA815_39348}

Mlig455_066921 {REF} {Length: 1157} {RNA1310_70090} {RNA815_39348}
5. MligTC455_46512 2553 53.19 Mlig455_035211

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.719

Region-enriched R3: 4.974/0.00000
Region-enriched R2: 3.362/0.00840

 1.736 - - - 0.778 - 0.958 Mlig455_035211 {REF} {Length: 699} {RNA1509_22822, RNA1509_5889} {RNA1310_52884, RNA1509_22822, RNA1509_5889} {RNA1509_22822, RNA1509_5889, RNA815_23505}
6. MligTC455_46043 62 1.3 Mlig455_042332

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.745

 1.735 - - - 0.780 - 0.955 Mlig455_042332 {REF} {Length: 1761} {Pfam: WSC domain [PF01822.21, score=47.9]; PAN domain [PF00024.28, score=19.6]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=46.2, Expect=8e-06]} {RNA1509_32911} {RNA1310_59750} {RNA815_37535}
7. MligTC455_05836 41 0.86 Mlig455_062933

Neo: -

Age: -

 GLRA3 1.73 - - - 0.766 - 0.964 Mlig455_062933 {REF} {Length: 2405} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=115.0]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=75.9]} {Human: ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=186, Expect=5e-53]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=179, Expect=2e-50]} {Mouse: ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=182, Expect=2e-51]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=179, Expect=1e-50]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=177, Expect=6e-50]; ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=177, Expect=5e-50]; ENSMUSG00000029212, Gabrb1, gamma-aminobutyric acid (GABA) A receptor, subunit beta 1, [Score=173, Expect=4e-48]} {Dmel: FBgn0024963, GluClalpha, [Score=178, Expect=1e-50]} {Celegans: WBGene00001591, glc-1, Glutamate-gated chloride channel alpha, [Score=193, Expect=5e-56]} {Smed: dd_Smed_v6_11342_0_1, dd_Smed_v6_11342_0_1, [Score=197, Expect=7e-58]} {RNA1310_58187}
8. MligTC455_16780 59 1.22 Mlig455_003112, Mlig455_062777

Neo: -

Age: -

 1.708 - - - 0.741 - 0.967

Mlig455_003112 {REF} {Length: 1644} {Pfam: PAN domain [PF14295.8, score=23.1]} {RNA1509_48973} {RNA1310_82250} {RNA815_43010}

Mlig455_062777 {REF} {Length: 1721} {RNA1509_48973} {RNA1310_82250} {RNA815_43010}
9. MligTC455_22064 31 0.65 Mlig455_039983

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.531

 XIAP 1.69 - 0.713 - - - 0.977 Mlig455_039983 {REF} {Length: 1538} {Pfam: Inhibitor of Apoptosis domain [PF00653.23, score=58.0]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=27.1]} {Human: ENSG00000101966, XIAP, X-linked inhibitor of apoptosis, [Score=83.2, Expect=9e-17]} {Mouse: ENSMUSG00000025860, Xiap, X-linked inhibitor of apoptosis, [Score=79.0, Expect=1e-15]} {Dmel: FBgn0015247, Diap2, Death-associated inhibitor of apoptosis 2, [Score=78.6, Expect=1e-15]} {Smed: dd_Smed_v6_14261_0_1, dd_Smed_v6_14261_0_1, [Score=45.8, Expect=5e-06]} {RNA1509_32747} {RNA1310_10819.1} {RNA815_7451}
10. MligTC455_41796 2616 54.49 Mlig455_034034, Mlig455_060413

Neo: -

Age: Down-Up-Up

Region-specific R3: 7.072

Region-enriched R3: 6.323/0.00000
Region-enriched R2: 3.096/0.00338

 WSCD2 1.69 - - - - 0.710 0.980

Mlig455_034034 {REF} {Length: 2795} {TRANSSPLICED} {Pfam: WSC domain [PF01822.21, score=115.8]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=64.3, Expect=1e-10]} {Mouse: ENSMUSG00000020393, Kremen1, kringle containing transmembrane protein 1, [Score=50.4, Expect=2e-06]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=73.2, Expect=1e-13]} {RNA1509_2359} {RNA1310_19442} {RNA815_10216}

Mlig455_060413 {REF} {Length: 2218} {Pfam: WSC domain [PF01822.21, score=116.3]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=66.2, Expect=4e-11]} {Mouse: ENSMUSG00000020393, Kremen1, kringle containing transmembrane protein 1, [Score=51.6, Expect=9e-07]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=70.5, Expect=9e-13]} {RNA1509_2359, RNA1509_23868} {RNA1310_19442, RNA1509_2359, RNA1509_23868} {RNA1509_2359, RNA1509_23868, RNA815_10216}
11. MligTC455_41795 1299 27.06 Mlig455_034057

Neo: -

Age: Down-Up-Up

Region-specific R3: 6.459

Region-enriched R3: 6.387/0.00000
Region-enriched R2: 3.329/0.00231

 1.686 - - - - 0.707 0.979 Mlig455_034057 {REF} {Length: 1136} {Pfam: WSC domain [PF01822.21, score=30.3]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=51.2, Expect=6e-07]} {RNA1509_7729} {RNA1310_19442} {RNA815_10216}
12. MligTC455_16404 11 0.23 Mlig455_062292

Neo: -

Age: -

 0.992 - - - 0.992 - - Mlig455_062292 {REF} {Length: 586} {RNA1509_24816} {RNA1310_8057} {RNA815_15393}
13. MligTC455_07504 85 1.77 Mlig455_001458

Neo: -

Age: -

 0.982 - - - - 0.982 - Mlig455_001458 {REF} {Length: 4238} {RNA1310_78279}
14. MligTC455_33344 32 0.66 Mlig455_002534

Neo: -

Age: Up-Down-Down

 0.982 - - - - 0.982 - Mlig455_002534 {REF} {Length: 4448} {RNA1509_26266} {RNA1310_121715} {RNA815_60971}
15. MligTC455_56652 5 0.11 Mlig455_004454

Neo: -

Age: -

 0.98 - - - - - 0.980 Mlig455_004454 {REF} {Length: 458} {RNA1509_34718} {RNA1310_73168} {RNA815_50584}
16. MligTC455_17969 93 1.94 Mlig455_059890, Mlig455_059897

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.281

 SRSF7 0.978 - - - 0.978 - -

Mlig455_059890 {REF} {Length: 1694} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=25.3]} {Human: ENSG00000115875, SRSF7, serine and arginine rich splicing factor 7, [Score=62.0, Expect=2e-11]} {Mouse: ENSMUSG00000024097, Srsf7, serine/arginine-rich splicing factor 7, [Score=61.6, Expect=4e-12]} {Celegans: WBGene00004703, rsp-6, Probable splicing factor, arginine/serine-rich 6, [Score=53.1, Expect=5e-09]} {RNA1509_31420} {RNA1310_17545} {RNA815_17686}

Mlig455_059897 {REF} {Length: 482} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=27.0]} {Human: ENSG00000115875, SRSF7, serine and arginine rich splicing factor 7, [Score=63.2, Expect=7e-12]} {Mouse: ENSMUSG00000024097, Srsf7, serine/arginine-rich splicing factor 7, [Score=62.8, Expect=1e-12]} {Dmel: FBgn0028554, x16, x16 splicing factor, [Score=46.6, Expect=3e-06]} {Celegans: WBGene00004703, rsp-6, Probable splicing factor, arginine/serine-rich 6, [Score=55.8, Expect=5e-10]} {RNA1509_40725} {RNA1310_38309} {RNA815_29185.1}
17. MligTC455_06139 5 0.1 Mlig455_060149

Neo: -

Age: -

 0.977 - - - - - 0.977 Mlig455_060149 {REF} {Length: 980} {RNA1310_23886.1} {RNA815_8813.1}
18. MligTC455_47590 22 0.46 Mlig455_017675, Mlig455_053765

Neo: -

Age: -

 LRRC74A 0.976 - - - - - 0.976

Mlig455_017675 {REF} {Length: 3797} {Pfam: Leucine Rich repeat [PF13516.8, score=47.9]; EF-hand domain pair [PF13499.8, score=29.1]; EF-hand domain [PF13405.8, score=28.8]; EF hand [PF00036.34, score=28.6]; EF-hand domain pair [PF13833.8, score=18.6]} {Human: ENSG00000100565, LRRC74A, leucine rich repeat containing 74A, [Score=143, Expect=3e-36]} {Mouse: ENSMUSG00000059114, Lrrc74a, leucine rich repeat containing 74A, [Score=142, Expect=5e-36]} {Celegans: WBGene00000554, cnb-1, Protein phosphatase 2B regulatory subunit cnb-1, [Score=50.4, Expect=5e-07]} {Smed: dd_Smed_v6_14506_0_1, dd_Smed_v6_14506_0_1, [Score=169, Expect=4e-45]} {RNA1310_50089}

Mlig455_053765 {REF} {Length: 3797} {Pfam: Leucine Rich repeat [PF13516.8, score=47.9]; EF-hand domain pair [PF13499.8, score=29.1]; EF-hand domain [PF13405.8, score=28.8]; EF hand [PF00036.34, score=28.6]; EF-hand domain pair [PF13833.8, score=18.6]} {Human: ENSG00000100565, LRRC74A, leucine rich repeat containing 74A, [Score=143, Expect=3e-36]} {Mouse: ENSMUSG00000059114, Lrrc74a, leucine rich repeat containing 74A, [Score=142, Expect=5e-36]} {Celegans: WBGene00000554, cnb-1, Protein phosphatase 2B regulatory subunit cnb-1, [Score=50.4, Expect=5e-07]} {Smed: dd_Smed_v6_14506_0_1, dd_Smed_v6_14506_0_1, [Score=169, Expect=4e-45]} {RNA1310_50089}
19. MligTC455_22354 65 1.35 Mlig455_009895, Mlig455_057001, Mlig455_057061

Neo: -

Age: logFC(26M/2M)=0.575

 EIF2B3, PPM1A 0.975 - - 0.975 - - -

Mlig455_009895 {REF} {Length: 1696} {TRANSSPLICED} {Pfam: MobA-like NTP transferase domain [PF12804.9, score=34.3]; Nucleotidyl transferase [PF00483.25, score=31.3]; Domain of unknown function (DUF4954) [PF16314.7, score=23.8]; Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=20.2]} {Human: ENSG00000070785, EIF2B3, eukaryotic translation initiation factor 2B subunit gamma, [Score=111, Expect=5e-26]} {Mouse: ENSMUSG00000028683, Eif2b3, eukaryotic translation initiation factor 2B, subunit 3, [Score=124, Expect=1e-30]} {Dmel: FBgn0034029, eIF2Bgamma, eukaryotic translation initiation factor 2B subunit gamma, [RH, Score=139, Expect=4e-36]} {Celegans: WBGene00004090, eif-2Bgamma, Probable translation initiation factor eIF-2B subunit gamma, [RH, Score=72.0, Expect=2e-13]} {RNA1509_11665} {RNA1310_17674} {RNA815_11116}

Mlig455_057001 {REF} {Length: 983} {Pfam: Domain of unknown function (DUF4954) [PF16314.7, score=25.6]; Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=23.3]} {Dmel: FBgn0034029, eIF2Bgamma, eukaryotic translation initiation factor 2B subunit gamma, [Score=73.6, Expect=2e-14]} {Celegans: WBGene00004090, eif-2Bgamma, Probable translation initiation factor eIF-2B subunit gamma, [RH, Score=71.2, Expect=8e-14]} {RNA1509_11665} {RNA1310_17674} {RNA815_11116}

Mlig455_057061 {REF} {Length: 1331} {Pfam: Domain of unknown function (DUF4954) [PF16314.7, score=24.3]; Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=21.9]} {Human: ENSG00000100614, PPM1A, protein phosphatase, Mg2+/Mn2+ dependent 1A, [Score=50.1, Expect=4e-07]; ENSG00000138032, PPM1B, protein phosphatase, Mg2+/Mn2+ dependent 1B, [Score=48.9, Expect=1e-05]; ENSG00000285542, AC013717.1, novel protein, PPM1B-SLC3A1 readthrough, [Score=48.5, Expect=1e-05]} {Mouse: ENSMUSG00000021096, Ppm1a, protein phosphatase 1A, magnesium dependent, alpha isoform, [Score=52.0, Expect=7e-07]; ENSMUSG00000061130, Ppm1b, protein phosphatase 1B, magnesium dependent, beta isoform, [Score=49.7, Expect=4e-06]} {Dmel: FBgn0034029, eIF2Bgamma, eukaryotic translation initiation factor 2B subunit gamma, [Score=75.1, Expect=2e-14]} {Celegans: WBGene00004090, eif-2Bgamma, Probable translation initiation factor eIF-2B subunit gamma, [RH, Score=71.2, Expect=2e-13]} {Smed: dd_Smed_v6_2275_0_1, dd_Smed_v6_2275_0_1, [Score=61.6, Expect=2e-10]} {RNA1509_11665} {RNA1310_17674} {RNA815_11116}
20. MligTC455_06420 81 1.69 Mlig455_004566

Neo: -

Age: -

 SLC25A38 0.971 - - - - 0.971 - Mlig455_004566 {REF} {Length: 2175} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=143.1]} {Human: ENSG00000144659, SLC25A38, solute carrier family 25 member 38, [RH, Score=130, Expect=3e-35]} {Mouse: ENSMUSG00000032519, Slc25a38, solute carrier family 25, member 38, [RH, Score=127, Expect=6e-34]} {Dmel: FBgn0028646, aralar1, [Score=100, Expect=2e-23]} {Celegans: WBGene00020422, T10F2.2, [Score=62.8, Expect=4e-11]} {Smed: dd_Smed_v6_12659_0_1, dd_Smed_v6_12659_0_1, [RH, Score=149, Expect=4e-43]} {RNA1310_18015.1} {RNA815_19336}
21. MligTC455_14331 9 0.18 Mlig455_036281

Neo: -

Age: -

 0.971 - - - - 0.971 - Mlig455_036281 {REF} {Length: 831} {NoTransDecoderORF} {RNA1509_35447} {RNA1310_64055} {RNA815_50141}
22. MligTC455_36331 1502 31.28 Mlig455_013523, Mlig455_013524, Mlig455_061355, Mlig455_061362

Neo: -

Age: logFC(26M/2M)=1.048

Region-specific R3: 5.547

Region-enriched R3: 6.000/0.00000

 KREMEN2 0.971 - - 0.971 - - -

Mlig455_013523 {REF} {Length: 404} {Pfam: F5/8 type C domain [PF00754.27, score=62.5]; Small zinc finger protein HVO_2753-like, Zn-binding pocket [PF07754.13, score=19.8]} {Smed: dd_Smed_v6_52492_0_1, dd_Smed_v6_52492_0_1, [Score=52.4, Expect=5e-08]} {RNA1509_2195} {RNA1310_4987.1} {RNA815_612.1}

Mlig455_013524 {REF} {Length: 932} {Pfam: F5/8 type C domain [PF00754.27, score=31.2]} {Smed: dd_Smed_v6_52492_0_1, dd_Smed_v6_52492_0_1, [Score=52.0, Expect=2e-08]} {RNA1509_21733} {RNA1310_11857} {RNA815_612.1}

Mlig455_061355 {REF} {Length: 1985} {Pfam: F5/8 type C domain [PF00754.27, score=62.5]; Small zinc finger protein HVO_2753-like, Zn-binding pocket [PF07754.13, score=19.8]} {Smed: dd_Smed_v6_52492_0_1, dd_Smed_v6_52492_0_1, [Score=52.4, Expect=5e-08]} {RNA1509_21733} {RNA1310_11857} {RNA815_612.1}

Mlig455_061362 {REF} {Length: 6001} {Pfam: F5/8 type C domain [PF00754.27, score=149.8]; WSC domain [PF01822.21, score=62.9]; Clip-domain serine protease homolog Scarface [PF18399.3, score=38.7]; Phostensin PP1-binding and SH3-binding region [PF13914.8, score=28.9]; Influenza A Proapoptotic protein [PF11986.10, score=22.3]; NgoBV restriction endonuclease [PF09564.12, score=20.4]} {Human: ENSG00000131650, KREMEN2, kringle containing transmembrane protein 2, [RH, Score=66.2, Expect=3e-10]} {Mouse: ENSMUSG00000040680, Kremen2, kringle containing transmembrane protein 2, [RH, Score=65.5, Expect=4e-10]} {Smed: dd_Smed_v6_52492_0_1, dd_Smed_v6_52492_0_1, [Score=56.2, Expect=6e-09]} {RNA1509_15294, RNA1509_21733} {RNA1310_11815, RNA1509_21733} {RNA1509_21733, RNA815_612.1}
23. MligTC455_45314 24 0.5 Mlig455_043345

Neo: -

Age: -

 0.966 - - - - - 0.966 Mlig455_043345 {REF} {Length: 1422} {Pfam: Pancreatic hormone peptide [PF00159.20, score=27.9]} {RNA1310_91502} {RNA815_61453}
24. MligTC455_45629 24 0.49 Mlig455_032109

Neo: -

Age: -

 0.966 - - - - - 0.966 Mlig455_032109 {REF} {Length: 788} {Pfam: Pancreatic hormone peptide [PF00159.20, score=28.0]} {RNA1509_59316} {RNA1310_91502} {RNA815_61453}
25. MligTC455_17111 14 0.29 Mlig455_006221

Neo: -

Age: -

 0.964 - - - - 0.964 - Mlig455_006221 {REF} {Length: 1881} {NoTransDecoderORF} {RNA1509_50956} {RNA1310_62917} {RNA815_9852.1}
26. MligTC455_37592 21 0.45 Mlig455_024823, Mlig455_024904, Mlig455_025343

Neo: -

Age: -

 0.963 - - - 0.963 - -

Mlig455_024823 {REF} {Length: 89} {NoTransDecoderORF}

Mlig455_024904 {REF} {Length: 89} {NoTransDecoderORF}

Mlig455_025343 {REF} {Length: 1768} {NoTransDecoderORF} {RNA1509_57805} {RNA1310_26676} {RNA815_51492}
27. MligTC455_10032 13 0.27 Mlig455_059883

Neo: -

Age: -

 0.96 - - - - 0.960 - Mlig455_059883 {REF} {Length: 509} {NoTransDecoderORF} {RNA1509_51124}
28. MligTC455_14942 14 0.29 Mlig455_014044

Neo: -

Age: -

Regeneration-enriched R4: 8.480
Regeneration-enriched R5: 6.277

 0.959 - - - - 0.959 - Mlig455_014044 {REF} {Length: 1896} {Pfam: CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5 [PF07878.13, score=19.5]; Phage integrase, N-terminal SAM-like domain [PF02899.19, score=19.0]} {RNA1509_41226} {RNA1310_13589} {RNA815_3347.1}
29. MligTC455_34100 12 0.25 Mlig455_000058

Neo: -

Age: -

 0.958 - - - - - 0.958 Mlig455_000058 {REF} {Length: 5641} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=114.4]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=112.8]; Integrase core domain [PF00665.28, score=39.3]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=34.5]; gag-polyprotein putative aspartyl protease [PF13975.8, score=27.3]; Aspartyl protease [PF13650.8, score=23.4]; Retroviral aspartyl protease [PF00077.22, score=20.9]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=290, Expect=8e-84]} {RNA1509_34066} {RNA1310_1125} {RNA815_25964}
30. MligTC455_26478 450 9.37 Mlig455_023316

Neo: -

Age: Up-Down-Down

Region-enriched R3: 5.218/0.00065
Region-enriched R2: 4.422/0.03223

 VWF 0.957 - - 0.957 - - - Mlig455_023316 {REF} {Length: 11924} {Pfam: von Willebrand factor type D domain [PF00094.27, score=316.7]; C8 domain [PF08742.13, score=132.2]; Trypsin Inhibitor like cysteine rich domain [PF01826.19, score=97.3]; von Willebrand factor type C domain [PF00093.20, score=28.5]; Major Vault Protein repeat domain [PF01505.20, score=22.1]; EGF-like domain [PF07974.15, score=19.4]} {Human: ENSG00000110799, VWF, von Willebrand factor, [RH, Score=561, Expect=3e-161]; ENSG00000197558, SSPO, SCO-spondin, [RH, Score=553, Expect=4e-158]} {Mouse: ENSMUSG00000001930, Vwf, Von Willebrand factor, [RH, Score=584, Expect=6e-169]; ENSMUSG00000029797, Sspo, SCO-spondin, [RH, Score=555, Expect=8e-159]} {Dmel: FBgn0029167, Hml, Hemolectin, [RH, Score=513, Expect=3e-146]} {Celegans: WBGene00000168, apx-1, Anterior pharynx in excess protein 1, [Score=75.9, Expect=2e-13]} {Smed: dd_Smed_v6_17988_0_1, dd_Smed_v6_17988_0_1, [RH, Score=1132, Expect=0.0]} {RNA1509_12284, RNA1509_28666, RNA1509_743, RNA1509_7717} {RNA1310_76, RNA1509_12284, RNA1509_28666, RNA1509_7717} {RNA1509_12284, RNA1509_28666, RNA1509_7717, RNA815_53.1}
31. MligTC455_12574 95 1.98 Mlig455_010864, Mlig455_010895

Neo: -

Age: -

 0.956 - - - - - 0.956

Mlig455_010864 {REF} {Length: 886} {RNA1310_70414} {RNA815_36183}

Mlig455_010895 {REF} {Length: 627} {RNA1310_70414} {RNA815_36183}
32. MligTC455_36455 8 0.16 Mlig455_038435

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_038435 {REF} {Length: 4019} {RNA1509_56529} {RNA1310_62490}
33. MligTC455_06823 18 0.37 Mlig455_048853

Neo: Germline

Age: -

Region-enriched R4: 4.530/0.00960

 0.955 - - - - 0.955 - Mlig455_048853 {REF} {Length: 804} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_51934} {RNA1310_14826} {RNA815_23224}
34. MligTC455_19683 30 0.62 Mlig455_009067

Neo: -

Age: Up-Down-Down

 0.955 - - - 0.955 - - Mlig455_009067 {REF} {Length: 1668} {RNA1509_57072} {RNA1310_25564} {RNA815_54244}
35. MligTC455_35387 36 0.76 Mlig455_022493

Neo: -

Age: -

 STOM 0.955 - - - - - 0.955 Mlig455_022493 {REF} {Length: 3725} {Pfam: SPFH domain / Band 7 family [PF01145.27, score=106.9]} {Human: ENSG00000148175, STOM, stomatin, [Score=318, Expect=2e-105]} {Mouse: ENSMUSG00000026880, Stom, stomatin, [Score=318, Expect=1e-105]} {Dmel: FBgn0260657, CG42540, [Score=333, Expect=4e-110]} {Celegans: WBGene00003166, mec-2, Mechanosensory protein 2, [Score=331, Expect=1e-110]} {Smed: dd_Smed_v6_6396_0_1, dd_Smed_v6_6396_0_1, [Score=392, Expect=4e-135]} {RNA1509_58730} {RNA1310_46627} {RNA815_48856}
36. MligTC455_11168 10 0.21 Mlig455_015184

Neo: -

Age: -

 0.954 - - - - - 0.954 Mlig455_015184 {REF} {Length: 1552} {NoTransDecoderORF} {RNA1509_44393} {RNA1310_60529.2} {RNA815_62333}
37. MligTC455_21337 11 0.23 Mlig455_047767

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_047767 {REF} {Length: 4066} {NoTransDecoderORF} {RNA1509_47234} {RNA1310_2938.1} {RNA815_14343.2}
38. MligTC455_25290 1213 25.26 Mlig455_038621

Neo: -

Age: Down-Up-Up

Region-specific R3: 6.812

Region-enriched R3: 6.785/0.00000

 TNN 0.953 - - 0.953 - - - Mlig455_038621 {REF} {Length: 1564} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=129.3]} {Human: ENSG00000120332, TNN, tenascin N, [Score=120, Expect=4e-29]; ENSG00000136859, ANGPTL2, angiopoietin like 2, [Score=119, Expect=5e-29]; ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=116, Expect=4e-28]} {Mouse: ENSMUSG00000026725, Tnn, tenascin N, [Score=123, Expect=4e-30]; ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=120, Expect=1e-29]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=119, Expect=2e-29]; ENSMUSG00000026938, Fcna, ficolin A, [Score=118, Expect=6e-30]} {Dmel: FBgn0051832, CG31832, [Score=105, Expect=4e-26]} {Celegans: WBGene00020516, T15B7.1, [Score=66.2, Expect=8e-12]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=85.5, Expect=6e-18]} {RNA1509_37886, RNA1509_56241} {RNA1310_24610.1, RNA1509_37886, RNA1509_56241} {RNA1509_37886, RNA1509_56241, RNA815_8978.2}
39. MligTC455_41072 794 16.55 Mlig455_050940

Neo: -

Age: logFC(26M/2M)=1.072

Region-specific R3: 4.616

Region-enriched R3: 4.925/0.00000

 0.953 - - 0.953 - - - Mlig455_050940 {REF} {Length: 769} {RNA1509_10741, RNA1509_26937} {RNA1310_44283.1, RNA1509_10741, RNA1509_26937} {RNA1509_10741, RNA1509_26937, RNA815_21735}
40. MligTC455_33935 17 0.35 Mlig455_011443

Neo: -

Age: -

 0.952 - - - - - 0.952 Mlig455_011443 {REF} {Length: 1901} {Pfam: Fibronectin type II domain [PF00040.21, score=54.5]} {Mouse: ENSMUSG00000054580, Pla2r1, phospholipase A2 receptor 1, [Score=50.1, Expect=2e-06]} {RNA1310_23349.1} {RNA815_44226.1}
41. MligTC455_55090 12 0.26 Mlig455_002755

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_002755 {REF} {Length: 27} {NoTransDecoderORF}
42. MligTC455_12303 10 0.21 Mlig455_037437, Mlig455_037460

Neo: -

Age: -

 HS3ST1 0.95 - - - - - 0.950

Mlig455_037437 {REF} {Length: 1816} {Pfam: Sulfotransferase domain [PF00685.29, score=53.6]; Sulfotransferase family [PF13469.8, score=38.5]} {Human: ENSG00000002587, HS3ST1, heparan sulfate-glucosamine 3-sulfotransferase 1, [Score=220, Expect=3e-70]; ENSG00000249853, HS3ST5, heparan sulfate-glucosamine 3-sulfotransferase 5, [Score=211, Expect=4e-66]} {Mouse: ENSMUSG00000051022, Hs3st1, heparan sulfate (glucosamine) 3-O-sulfotransferase 1, [Score=222, Expect=5e-71]; ENSMUSG00000044499, Hs3st5, heparan sulfate (glucosamine) 3-O-sulfotransferase 5, [Score=213, Expect=3e-67]} {Dmel: FBgn0031005, Hs3st-B, Heparan sulfate 3-O sulfotransferase-B, [Score=162, Expect=3e-47]} {Celegans: WBGene00044303, hst-3.2, Heparan SulphoTransferase, [Score=171, Expect=1e-51]} {Smed: dd_Smed_v6_81402_0_1, dd_Smed_v6_81402_0_1, [Score=133, Expect=2e-38]} {RNA1310_105415}

Mlig455_037460 {REF} {Length: 875} {Pfam: Sulfotransferase domain [PF00685.29, score=53.0]; Sulfotransferase family [PF13469.8, score=38.5]} {Human: ENSG00000002587, HS3ST1, heparan sulfate-glucosamine 3-sulfotransferase 1, [Score=220, Expect=3e-70]; ENSG00000249853, HS3ST5, heparan sulfate-glucosamine 3-sulfotransferase 5, [Score=211, Expect=4e-66]} {Mouse: ENSMUSG00000051022, Hs3st1, heparan sulfate (glucosamine) 3-O-sulfotransferase 1, [Score=222, Expect=4e-71]; ENSMUSG00000044499, Hs3st5, heparan sulfate (glucosamine) 3-O-sulfotransferase 5, [Score=214, Expect=3e-67]} {Dmel: FBgn0031005, Hs3st-B, Heparan sulfate 3-O sulfotransferase-B, [Score=162, Expect=2e-47]} {Celegans: WBGene00044303, hst-3.2, Heparan SulphoTransferase, [Score=171, Expect=1e-51]} {Smed: dd_Smed_v6_81402_0_1, dd_Smed_v6_81402_0_1, [Score=133, Expect=2e-38]}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA