TomoSeq data search

Data search

Results for MligTC455_19823

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_19823

44194

920.70

Mlig455_008974

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.335

RPL7A

Mlig455_008974 {REF} {Length: 969} {TRANSSPLICED} {Pfam: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family [PF01248.28, score=84.6]} {Human: ENSG00000148303, RPL7A, ribosomal protein L7a, [RH, Score=338, Expect=2e-117]; ENSG00000280858, RPL7A, ribosomal protein L7a, [RH, Score=338, Expect=2e-117]} {Mouse: ENSMUSG00000062647, Rpl7a, ribosomal protein L7A, [RH, Score=338, Expect=1e-117]} {Dmel: FBgn0014026, RpL7A, Ribosomal protein L7A, [RH, Score=301, Expect=5e-103]} {Celegans: WBGene00004419, rpl-7A, 60S ribosomal protein L7a, [RH, Score=305, Expect=1e-104]} {Smed: dd_Smed_v6_296_0_1, dd_Smed_v6_296_0_1, [RH, Score=300, Expect=1e-102]} {RNA1509_2102, RNA1509_274, RNA1509_30291, RNA1509_420} {RNA1310_38447, RNA1509_2102, RNA1509_274, RNA1509_30291, RNA1509_420} {RNA1509_2102, RNA1509_274, RNA1509_30291, RNA1509_420, RNA815_17072}

Cumulative graph for MligTC455_19823

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.652	9.906	0.07363	0.60128
RegionR2	-0.558	9.906	0.08256	0.35256
RegionR3	0.325	9.906	0.23665	0.77812
RegionR4	0.147	9.906	0.62708	0.93590
RegionR5	0.177	9.906	0.51024	0.87334
RegionR6	0.258	9.906	0.34417	0.93103
RegionR7	0.44	9.906	0.09420	0.58720
RegionR8	-0.136	9.906	0.63911	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.65	9.906	0.13407	0.86883
RegenerationR2	-0.297	9.906	0.41329	0.82269
RegenerationR3	-0.605	9.906	0.09685	0.49879
RegenerationR4	-0.894	9.906	0.01659	0.20199
RegenerationR5	-0.969	9.906	0.00744	0.15722
RegenerationR6	-0.428	9.906	0.23770	0.58512
RegenerationBL	-0.157	9.906	0.60911	0.95482
RegenerationTP	-0.488	9.906	0.14225	0.56247

Genes with expression patterns similar to MligTC455_19823

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_19823	44194	920.7	Mlig455_008974	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.335	RPL7A	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_008974 {REF} {Length: 969} {TRANSSPLICED} {Pfam: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family [PF01248.28, score=84.6]} {Human: ENSG00000148303, RPL7A, ribosomal protein L7a, [RH, Score=338, Expect=2e-117]; ENSG00000280858, RPL7A, ribosomal protein L7a, [RH, Score=338, Expect=2e-117]} {Mouse: ENSMUSG00000062647, Rpl7a, ribosomal protein L7A, [RH, Score=338, Expect=1e-117]} {Dmel: FBgn0014026, RpL7A, Ribosomal protein L7A, [RH, Score=301, Expect=5e-103]} {Celegans: WBGene00004419, rpl-7A, 60S ribosomal protein L7a, [RH, Score=305, Expect=1e-104]} {Smed: dd_Smed_v6_296_0_1, dd_Smed_v6_296_0_1, [RH, Score=300, Expect=1e-102]} {RNA1509_2102, RNA1509_274, RNA1509_30291, RNA1509_420} {RNA1310_38447, RNA1509_2102, RNA1509_274, RNA1509_30291, RNA1509_420} {RNA1509_2102, RNA1509_274, RNA1509_30291, RNA1509_420, RNA815_17072}
2.	MligTC455_20563	35024	729.67	Mlig455_009057	Neo: Int S/G2/M Age: Down-Down-Up	RPS3A	1.907	-	-	-	0.946	-	0.961	Mlig455_009057 {REF} {Length: 1852} {TRANSSPLICED} {Pfam: Ribosomal S3Ae family [PF01015.20, score=253.9]} {Human: ENSG00000145425, RPS3A, ribosomal protein S3A, [RH, Score=333, Expect=9e-116]} {Mouse: ENSMUSG00000028081, Rps3a1, ribosomal protein S3A1, [RH, Score=335, Expect=2e-116]} {Dmel: FBgn0017545, RpS3A, Ribosomal protein S3A, [RH, Score=271, Expect=2e-91]} {Celegans: WBGene00004470, rps-1, 40S ribosomal protein S3a, [RH, Score=301, Expect=9e-104]} {Smed: dd_Smed_v6_163_0_1, dd_Smed_v6_163_0_1, [RH, Score=281, Expect=8e-96]} {RNA1509_1769, RNA1509_20631, RNA1509_23431, RNA1509_2792, RNA1509_332, RNA1509_7364, RNA1509_9048} {RNA1310_36604, RNA1509_1769, RNA1509_20631, RNA1509_23431, RNA1509_2792, RNA1509_332, RNA1509_7364, RNA1509_9048} {RNA1509_1769, RNA1509_20631, RNA1509_23431, RNA1509_2792, RNA1509_332, RNA1509_7364, RNA1509_9048, RNA815_17001}
3.	MligTC455_20564	32613	679.43	Mlig455_058127	Neo: - Age: logFC(26M/2M)=1.827	RPS3A	1.901	-	-	-	0.952	-	0.949	Mlig455_058127 {REF} {Length: 1860} {TRANSSPLICED} {Pfam: Ribosomal S3Ae family [PF01015.20, score=253.9]} {Human: ENSG00000145425, RPS3A, ribosomal protein S3A, [RH, Score=334, Expect=4e-116]} {Mouse: ENSMUSG00000028081, Rps3a1, ribosomal protein S3A1, [RH, Score=335, Expect=1e-116]} {Dmel: FBgn0017545, RpS3A, Ribosomal protein S3A, [RH, Score=271, Expect=1e-91]} {Celegans: WBGene00004470, rps-1, 40S ribosomal protein S3a, [RH, Score=303, Expect=3e-104]} {Smed: dd_Smed_v6_163_0_1, dd_Smed_v6_163_0_1, [RH, Score=283, Expect=2e-96]} {RNA1509_13182, RNA1509_23431, RNA1509_3301, RNA1509_49526} {RNA1310_36604, RNA1509_13182, RNA1509_3301, RNA1509_49526} {RNA1509_13182, RNA1509_3301, RNA1509_49526, RNA815_17001}
4.	MligTC455_40568	42129	877.69	Mlig455_022127	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.193	RPL3	1.824	-	-	0.849	-	-	0.975	Mlig455_022127 {REF} {Length: 1407} {TRANSSPLICED} {Pfam: Ribosomal protein L3 [PF00297.24, score=601.0]} {Human: ENSG00000100316, RPL3, ribosomal protein L3, [RH, Score=649, Expect=0.0]} {Mouse: ENSMUSG00000060036, Rpl3, ribosomal protein L3, [RH, Score=648, Expect=0.0]} {Dmel: FBgn0020910, RpL3, Ribosomal protein L3, [RH, Score=638, Expect=0.0]} {Celegans: WBGene00004414, rpl-3, 60S ribosomal protein L3, [RH, Score=608, Expect=0.0]} {Smed: dd_Smed_v6_127_0_1, dd_Smed_v6_127_0_1, [RH, Score=596, Expect=0.0]} {RNA1509_1388, RNA1509_16343, RNA1509_2153, RNA1509_25626, RNA1509_4325, RNA1509_4415, RNA1509_4728, RNA1509_4856, RNA1509_78, RNA1509_8560} {RNA1310_23674, RNA1509_1388, RNA1509_16343, RNA1509_2153, RNA1509_25626, RNA1509_4325, RNA1509_4415, RNA1509_4728, RNA1509_4856, RNA1509_78, RNA1509_8560} {RNA1509_1388, RNA1509_16343, RNA1509_2153, RNA1509_25626, RNA1509_4325, RNA1509_4415, RNA1509_4728, RNA1509_4856, RNA1509_78, RNA1509_8560, RNA815_9915.1}

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