TomoSeq data search

Data search

Results for MligTC455_20563

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_20563

35024

729.67

Mlig455_009057

Neo: Int S/G2/M

Age: Down-Down-Up

RPS3A

Mlig455_009057 {REF} {Length: 1852} {TRANSSPLICED} {Pfam: Ribosomal S3Ae family [PF01015.20, score=253.9]} {Human: ENSG00000145425, RPS3A, ribosomal protein S3A, [RH, Score=333, Expect=9e-116]} {Mouse: ENSMUSG00000028081, Rps3a1, ribosomal protein S3A1, [RH, Score=335, Expect=2e-116]} {Dmel: FBgn0017545, RpS3A, Ribosomal protein S3A, [RH, Score=271, Expect=2e-91]} {Celegans: WBGene00004470, rps-1, 40S ribosomal protein S3a, [RH, Score=301, Expect=9e-104]} {Smed: dd_Smed_v6_163_0_1, dd_Smed_v6_163_0_1, [RH, Score=281, Expect=8e-96]} {RNA1509_1769, RNA1509_20631, RNA1509_23431, RNA1509_2792, RNA1509_332, RNA1509_7364, RNA1509_9048} {RNA1310_36604, RNA1509_1769, RNA1509_20631, RNA1509_23431, RNA1509_2792, RNA1509_332, RNA1509_7364, RNA1509_9048} {RNA1509_1769, RNA1509_20631, RNA1509_23431, RNA1509_2792, RNA1509_332, RNA1509_7364, RNA1509_9048, RNA815_17001}

Cumulative graph for MligTC455_20563

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.949	9.563	0.00224	0.15261
RegionR2	-0.45	9.563	0.07108	0.32534
RegionR3	0.333	9.563	0.11903	0.59740
RegionR4	0.431	9.563	0.07065	0.24358
RegionR5	0.488	9.563	0.01851	0.09161
RegionR6	0.305	9.563	0.15341	0.69877
RegionR7	0.374	9.563	0.07478	0.52801
RegionR8	-0.532	9.563	0.02699	0.32039

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.244	9.563	0.50683	1.00000
RegenerationR2	-0.162	9.563	0.56611	0.90107
RegenerationR3	-0.271	9.563	0.33954	0.76391
RegenerationR4	-0.497	9.563	0.08767	0.46487
RegenerationR5	-0.743	9.563	0.00816	0.16394
RegenerationR6	-0.129	9.563	0.64618	0.89652
RegenerationBL	0.216	9.563	0.36494	0.73333
RegenerationTP	0.045	9.563	0.86191	1.00000

Genes with expression patterns similar to MligTC455_20563

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_20563	35024	729.67	Mlig455_009057	Neo: Int S/G2/M Age: Down-Down-Up	RPS3A	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_009057 {REF} {Length: 1852} {TRANSSPLICED} {Pfam: Ribosomal S3Ae family [PF01015.20, score=253.9]} {Human: ENSG00000145425, RPS3A, ribosomal protein S3A, [RH, Score=333, Expect=9e-116]} {Mouse: ENSMUSG00000028081, Rps3a1, ribosomal protein S3A1, [RH, Score=335, Expect=2e-116]} {Dmel: FBgn0017545, RpS3A, Ribosomal protein S3A, [RH, Score=271, Expect=2e-91]} {Celegans: WBGene00004470, rps-1, 40S ribosomal protein S3a, [RH, Score=301, Expect=9e-104]} {Smed: dd_Smed_v6_163_0_1, dd_Smed_v6_163_0_1, [RH, Score=281, Expect=8e-96]} {RNA1509_1769, RNA1509_20631, RNA1509_23431, RNA1509_2792, RNA1509_332, RNA1509_7364, RNA1509_9048} {RNA1310_36604, RNA1509_1769, RNA1509_20631, RNA1509_23431, RNA1509_2792, RNA1509_332, RNA1509_7364, RNA1509_9048} {RNA1509_1769, RNA1509_20631, RNA1509_23431, RNA1509_2792, RNA1509_332, RNA1509_7364, RNA1509_9048, RNA815_17001}
2.	MligTC455_20564	32613	679.43	Mlig455_058127	Neo: - Age: logFC(26M/2M)=1.827	RPS3A	5.816	0.957	0.959	0.983	0.998	0.930	0.989	Mlig455_058127 {REF} {Length: 1860} {TRANSSPLICED} {Pfam: Ribosomal S3Ae family [PF01015.20, score=253.9]} {Human: ENSG00000145425, RPS3A, ribosomal protein S3A, [RH, Score=334, Expect=4e-116]} {Mouse: ENSMUSG00000028081, Rps3a1, ribosomal protein S3A1, [RH, Score=335, Expect=1e-116]} {Dmel: FBgn0017545, RpS3A, Ribosomal protein S3A, [RH, Score=271, Expect=1e-91]} {Celegans: WBGene00004470, rps-1, 40S ribosomal protein S3a, [RH, Score=303, Expect=3e-104]} {Smed: dd_Smed_v6_163_0_1, dd_Smed_v6_163_0_1, [RH, Score=283, Expect=2e-96]} {RNA1509_13182, RNA1509_23431, RNA1509_3301, RNA1509_49526} {RNA1310_36604, RNA1509_13182, RNA1509_3301, RNA1509_49526} {RNA1509_13182, RNA1509_3301, RNA1509_49526, RNA815_17001}
3.	MligTC455_19823	44194	920.7	Mlig455_008974	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.335	RPL7A	1.907	-	-	-	0.946	-	0.961	Mlig455_008974 {REF} {Length: 969} {TRANSSPLICED} {Pfam: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family [PF01248.28, score=84.6]} {Human: ENSG00000148303, RPL7A, ribosomal protein L7a, [RH, Score=338, Expect=2e-117]; ENSG00000280858, RPL7A, ribosomal protein L7a, [RH, Score=338, Expect=2e-117]} {Mouse: ENSMUSG00000062647, Rpl7a, ribosomal protein L7A, [RH, Score=338, Expect=1e-117]} {Dmel: FBgn0014026, RpL7A, Ribosomal protein L7A, [RH, Score=301, Expect=5e-103]} {Celegans: WBGene00004419, rpl-7A, 60S ribosomal protein L7a, [RH, Score=305, Expect=1e-104]} {Smed: dd_Smed_v6_296_0_1, dd_Smed_v6_296_0_1, [RH, Score=300, Expect=1e-102]} {RNA1509_2102, RNA1509_274, RNA1509_30291, RNA1509_420} {RNA1310_38447, RNA1509_2102, RNA1509_274, RNA1509_30291, RNA1509_420} {RNA1509_2102, RNA1509_274, RNA1509_30291, RNA1509_420, RNA815_17072}
4.	MligTC455_40568	42129	877.69	Mlig455_022127	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.193	RPL3	1.692	-	-	0.740	-	-	0.952	Mlig455_022127 {REF} {Length: 1407} {TRANSSPLICED} {Pfam: Ribosomal protein L3 [PF00297.24, score=601.0]} {Human: ENSG00000100316, RPL3, ribosomal protein L3, [RH, Score=649, Expect=0.0]} {Mouse: ENSMUSG00000060036, Rpl3, ribosomal protein L3, [RH, Score=648, Expect=0.0]} {Dmel: FBgn0020910, RpL3, Ribosomal protein L3, [RH, Score=638, Expect=0.0]} {Celegans: WBGene00004414, rpl-3, 60S ribosomal protein L3, [RH, Score=608, Expect=0.0]} {Smed: dd_Smed_v6_127_0_1, dd_Smed_v6_127_0_1, [RH, Score=596, Expect=0.0]} {RNA1509_1388, RNA1509_16343, RNA1509_2153, RNA1509_25626, RNA1509_4325, RNA1509_4415, RNA1509_4728, RNA1509_4856, RNA1509_78, RNA1509_8560} {RNA1310_23674, RNA1509_1388, RNA1509_16343, RNA1509_2153, RNA1509_25626, RNA1509_4325, RNA1509_4415, RNA1509_4728, RNA1509_4856, RNA1509_78, RNA1509_8560} {RNA1509_1388, RNA1509_16343, RNA1509_2153, RNA1509_25626, RNA1509_4325, RNA1509_4415, RNA1509_4728, RNA1509_4856, RNA1509_78, RNA1509_8560, RNA815_9915.1}

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